RNA–Protein interactions for RNA: ENST00000478840.1

UPF3B-203, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3B, Length 748 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-203ENST00000478840 BMFQ96LC9 184 aa3.36□□□□□ -1.87
UPF3B-203ENST00000478840 HINT2Q9BX68 163 aa3.36□□□□□ -1.87
UPF3B-203ENST00000478840 OSBPL11Q9BXB4 747 aa3.36□□□□□ -1.87
UPF3B-203ENST00000478840 TOLLIPQ9H0E2 274 aa3.36□□□□□ -1.87
UPF3B-203ENST00000478840 OR51B5Q9H339 312 aa3.36□□□□□ -1.87
UPF3B-203ENST00000478840 ZNF442Q9H7R0 627 aa3.36□□□□□ -1.87
UPF3B-203ENST00000478840 TMEM27Q9HBJ8 222 aa3.36□□□□□ -1.87
UPF3B-203ENST00000478840 ANKHQ9HCJ1 492 aa3.36□□□□□ -1.87
UPF3B-203ENST00000478840 OR12D3Q9UGF7 316 aa3.36□□□□□ -1.87
UPF3B-203ENST00000478840 NEU3Q9UQ49 428 aa3.36□□□□□ -1.87
UPF3B-203ENST00000478840 V9GYY9 64 aa3.36□□□□□ -1.87
UPF3B-203ENST00000478840 EIF4G1Q04637 1599 aaKnown RBP3.36□□□□□ -1.87
UPF3B-203ENST00000478840 ADAMTS13Q76LX8 1427 aa3.36□□□□□ -1.87
UPF3B-203ENST00000478840 PIKFYVEQ9Y2I7 2098 aa3.35□□□□□ -1.87
UPF3B-203ENST00000478840 ATRXP46100 2492 aa3.35□□□□□ -1.87
UPF3B-203ENST00000478840 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.35□□□□□ -1.87
UPF3B-203ENST00000478840 A0A096LNJ9 63 aa3.35□□□□□ -1.87
UPF3B-203ENST00000478840 IGHV1-69DA0A0B4J2H0 117 aa3.35□□□□□ -1.87
UPF3B-203ENST00000478840 A0A0U1RQV1 116 aa3.35□□□□□ -1.87
UPF3B-203ENST00000478840 ANKRD20A5PA0PJZ0 165 aa3.35□□□□□ -1.87
UPF3B-203ENST00000478840 HSBP1L1C9JCN9 74 aa3.35□□□□□ -1.87
UPF3B-203ENST00000478840 ANGPTL7O43827 346 aa3.35□□□□□ -1.87
UPF3B-203ENST00000478840 ALOX12BO75342 701 aa3.35□□□□□ -1.87
UPF3B-203ENST00000478840 ZMPSTE24O75844 475 aa3.35□□□□□ -1.87
UPF3B-203ENST00000478840 SLC25A14O95258 325 aaPredicted RBP3.35□□□□□ -1.87
UPF3B-203ENST00000478840 NPPAP01160 153 aa3.35□□□□□ -1.87
UPF3B-203ENST00000478840 PSG2P11465 335 aa3.35□□□□□ -1.87
UPF3B-203ENST00000478840 ARL2P36404 184 aa3.35□□□□□ -1.87
UPF3B-203ENST00000478840 KCNJ3P48549 501 aa3.35□□□□□ -1.87
UPF3B-203ENST00000478840 HCCSP53701 268 aa3.35□□□□□ -1.87
UPF3B-203ENST00000478840 PAFAH1B2P68402 229 aa3.35□□□□□ -1.87
UPF3B-203ENST00000478840 ST3GAL4Q11206 333 aa3.35□□□□□ -1.87
UPF3B-203ENST00000478840 DUPD1Q68J44 220 aa3.35□□□□□ -1.87
UPF3B-203ENST00000478840 UBAC2Q8NBM4 344 aa3.35□□□□□ -1.87
UPF3B-203ENST00000478840 LGALS14Q8TCE9 139 aa3.35□□□□□ -1.87
UPF3B-203ENST00000478840 C15orf40Q8WUR7 153 aa3.35□□□□□ -1.87
UPF3B-203ENST00000478840 TIMM17AQ99595 171 aa3.35□□□□□ -1.87
UPF3B-203ENST00000478840 TSNAXQ99598 290 aaKnown RBP3.35□□□□□ -1.87
UPF3B-203ENST00000478840 TPK1Q9H3S4 243 aa3.35□□□□□ -1.87
UPF3B-203ENST00000478840 KLF12Q9Y4X4 402 aa3.35□□□□□ -1.87
UPF3B-203ENST00000478840 TP53BP1Q12888 1972 aaPredicted RBP3.34□□□□□ -1.87
UPF3B-203ENST00000478840 C11orf94C9JXX5 98 aa3.34□□□□□ -1.87
UPF3B-203ENST00000478840 LINC01619G3V211 115 aa3.34□□□□□ -1.87
UPF3B-203ENST00000478840 TAAR5O14804 337 aa3.34□□□□□ -1.87
UPF3B-203ENST00000478840 GNRHRP30968 328 aa3.34□□□□□ -1.87
UPF3B-203ENST00000478840 CD70P32970 193 aa3.34□□□□□ -1.87
UPF3B-203ENST00000478840 MNAT1P51948 309 aa3.34□□□□□ -1.87
UPF3B-203ENST00000478840 NDUFA8P51970 172 aa3.34□□□□□ -1.87
UPF3B-203ENST00000478840 CDKN2DP55273 166 aa3.34□□□□□ -1.87
UPF3B-203ENST00000478840 GFERP55789 205 aa3.34□□□□□ -1.87
UPF3B-203ENST00000478840 CACNG7P62955 275 aa3.34□□□□□ -1.87
UPF3B-203ENST00000478840 TNNC1P63316 161 aa3.34□□□□□ -1.87
UPF3B-203ENST00000478840 OR1Q1Q15612 314 aa3.34□□□□□ -1.87
UPF3B-203ENST00000478840 OR2T5Q6IEZ7 315 aa3.34□□□□□ -1.87
UPF3B-203ENST00000478840 TMEM205Q6UW68 189 aa3.34□□□□□ -1.87
UPF3B-203ENST00000478840 COPS6Q7L5N1 327 aa3.34□□□□□ -1.87
UPF3B-203ENST00000478840 NKAIN4Q8IVV8 208 aa3.34□□□□□ -1.87
UPF3B-203ENST00000478840 CDKL3Q8IVW4 592 aaPredicted RBP3.34□□□□□ -1.87
UPF3B-203ENST00000478840 DRAXINQ8NBI3 349 aaPredicted RBP3.34□□□□□ -1.87
UPF3B-203ENST00000478840 C19orf18Q8NEA5 215 aa3.34□□□□□ -1.87
UPF3B-203ENST00000478840 OR2T29Q8NH02 315 aa3.34□□□□□ -1.87
UPF3B-203ENST00000478840 OR51A7Q8NH64 312 aa3.34□□□□□ -1.87
UPF3B-203ENST00000478840 SRSF12Q8WXF0 261 aaKnown RBP3.34□□□□□ -1.87
UPF3B-203ENST00000478840 PTX4Q96A99 478 aa3.34□□□□□ -1.87
UPF3B-203ENST00000478840 CAMK2N2Q96S95 79 aa3.34□□□□□ -1.87
UPF3B-203ENST00000478840 PRRG3Q9BZD7 231 aa3.34□□□□□ -1.87
UPF3B-203ENST00000478840 FBXO8Q9NRD0 319 aa3.34□□□□□ -1.87
UPF3B-203ENST00000478840 NYAP2Q9P242 653 aa3.34□□□□□ -1.87
UPF3B-203ENST00000478840 ZNF229Q9UJW7 825 aa3.34□□□□□ -1.87
UPF3B-203ENST00000478840 SIGLEC9Q9Y336 463 aa3.34□□□□□ -1.87
UPF3B-203ENST00000478840 WSB1Q9Y6I7 421 aa3.34□□□□□ -1.87
UPF3B-203ENST00000478840 ARHGAP21Q5T5U3 1957 aa3.34□□□□□ -1.88
UPF3B-203ENST00000478840 BRCA1P38398 1863 aaKnown RBP3.33□□□□□ -1.88
UPF3B-203ENST00000478840 LRP4O75096 1905 aa3.33□□□□□ -1.88
UPF3B-203ENST00000478840 TDRD6O60522 2096 aaKnown RBP3.33□□□□□ -1.88
UPF3B-203ENST00000478840 IGHV2OR16-5A0A0B4J2B6 119 aa3.33□□□□□ -1.88
UPF3B-203ENST00000478840 H7C2Y5 167 aa3.33□□□□□ -1.88
UPF3B-203ENST00000478840 GCM2O75603 506 aaPredicted RBP3.33□□□□□ -1.88
UPF3B-203ENST00000478840 UPK1BO75841 260 aa3.33□□□□□ -1.88
UPF3B-203ENST00000478840 YIF1AO95070 293 aa3.33□□□□□ -1.88
UPF3B-203ENST00000478840 TTC4O95801 387 aa3.33□□□□□ -1.88
UPF3B-203ENST00000478840 PTHP01270 115 aa3.33□□□□□ -1.88
UPF3B-203ENST00000478840 RHOCP08134 193 aa3.33□□□□□ -1.88
UPF3B-203ENST00000478840 DNAH10OSP0CZ25 163 aa3.33□□□□□ -1.88
UPF3B-203ENST00000478840 DTYMKP23919 212 aa3.33□□□□□ -1.88
UPF3B-203ENST00000478840 DEKP35659 375 aaKnown RBP3.33□□□□□ -1.88
UPF3B-203ENST00000478840 RPL31P62899 125 aaKnown RBP3.33□□□□□ -1.88
UPF3B-203ENST00000478840 C2orf54Q08AI8 447 aa3.33□□□□□ -1.88
UPF3B-203ENST00000478840 NDUFAF6Q330K2 333 aa3.33□□□□□ -1.88
UPF3B-203ENST00000478840 TSPO2Q5TGU0 170 aa3.33□□□□□ -1.88
UPF3B-203ENST00000478840 DEGS2Q6QHC5 323 aa3.33□□□□□ -1.88
UPF3B-203ENST00000478840 TCAIMQ8N3R3 496 aa3.33□□□□□ -1.88
UPF3B-203ENST00000478840 GPR26Q8NDV2 337 aa3.33□□□□□ -1.88
UPF3B-203ENST00000478840 RDH12Q96NR8 316 aa3.33□□□□□ -1.88
UPF3B-203ENST00000478840 SLC25A39Q9BZJ4 359 aaPredicted RBP3.33□□□□□ -1.88
UPF3B-203ENST00000478840 ULBP2Q9BZM5 246 aa3.33□□□□□ -1.88
UPF3B-203ENST00000478840 VCX3AQ9NNX9 186 aa3.33□□□□□ -1.88
UPF3B-203ENST00000478840 CELA1Q9UNI1 258 aa3.33□□□□□ -1.88
UPF3B-203ENST00000478840 SMIM26A0A096LP01 95 aa3.32□□□□□ -1.88
UPF3B-203ENST00000478840 RAB19A4D1S5 217 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms