RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 SMYD1Q8NB12 490 aa9.66□□□□□ -0.86
HDAC8-217ENST00000478743 OR5D13Q8NGL4 314 aa9.66□□□□□ -0.86
HDAC8-217ENST00000478743 OR9Q1Q8NGQ5 310 aa9.66□□□□□ -0.86
HDAC8-217ENST00000478743 BCAS4Q8TDM0 211 aa9.66□□□□□ -0.86
HDAC8-217ENST00000478743 WDR13Q9H1Z4 485 aa9.66□□□□□ -0.86
HDAC8-217ENST00000478743 PPP1R3EQ9H7J1 279 aa9.66□□□□□ -0.86
HDAC8-217ENST00000478743 EVA1AQ9H8M9 152 aa9.66□□□□□ -0.86
HDAC8-217ENST00000478743 ABCB10Q9NRK6 738 aa9.66□□□□□ -0.86
HDAC8-217ENST00000478743 C19orf12Q9NSK7 152 aa9.66□□□□□ -0.86
HDAC8-217ENST00000478743 SLC25A10Q9UBX3 287 aaPredicted RBP9.66□□□□□ -0.86
HDAC8-217ENST00000478743 PITPNC1Q9UKF7 332 aa9.66□□□□□ -0.86
HDAC8-217ENST00000478743 GMNCA6NCL1 334 aa9.65□□□□□ -0.86
HDAC8-217ENST00000478743 TMEM247A6NEH6 219 aa9.65□□□□□ -0.86
HDAC8-217ENST00000478743 ITM2AO43736 263 aa9.65□□□□□ -0.86
HDAC8-217ENST00000478743 AMY1AP04745 511 aa9.65□□□□□ -0.86
HDAC8-217ENST00000478743 AMY2AP04746 511 aa9.65□□□□□ -0.86
HDAC8-217ENST00000478743 BMP2P12643 396 aa9.65□□□□□ -0.86
HDAC8-217ENST00000478743 MUC1P15941 1255 aaPredicted RBP9.65□□□□□ -0.86
HDAC8-217ENST00000478743 CTLA4P16410 223 aa9.65□□□□□ -0.86
HDAC8-217ENST00000478743 PAICSP22234 425 aaKnown RBP9.65□□□□□ -0.86
HDAC8-217ENST00000478743 CD24P25063 80 aa9.65□□□□□ -0.86
HDAC8-217ENST00000478743 CCT5P48643 541 aa9.65□□□□□ -0.86
HDAC8-217ENST00000478743 WDR4P57081 412 aaKnown RBP9.65□□□□□ -0.86
HDAC8-217ENST00000478743 RPL27P61353 136 aaKnown RBP9.65□□□□□ -0.86
HDAC8-217ENST00000478743 LRRC74AQ0VAA2 488 aa9.65□□□□□ -0.86
HDAC8-217ENST00000478743 BLMHQ13867 455 aa9.65□□□□□ -0.86
HDAC8-217ENST00000478743 SELPLGQ14242 412 aa9.65□□□□□ -0.86
HDAC8-217ENST00000478743 WDR82Q6UXN9 313 aa9.65□□□□□ -0.86
HDAC8-217ENST00000478743 ZNF781Q8N8C0 355 aa9.65□□□□□ -0.86
HDAC8-217ENST00000478743 GPR32P1Q8NGA4 272 aa9.65□□□□□ -0.86
HDAC8-217ENST00000478743 SPRYD4Q8WW59 207 aaPredicted RBP9.65□□□□□ -0.86
HDAC8-217ENST00000478743 IFT81Q8WYA0 676 aa9.65□□□□□ -0.86
HDAC8-217ENST00000478743 RBP7Q96R05 134 aa9.65□□□□□ -0.86
HDAC8-217ENST00000478743 AIG1Q9NVV5 245 aa9.65□□□□□ -0.86
HDAC8-217ENST00000478743 SORL1Q92673 2214 aa9.65□□□□□ -0.86
HDAC8-217ENST00000478743 FAT2Q9NYQ8 4349 aa9.64□□□□□ -0.87
HDAC8-217ENST00000478743 NPIPB13A6NJU9 1138 aa9.64□□□□□ -0.87
HDAC8-217ENST00000478743 CD300LBA8K4G0 201 aa9.64□□□□□ -0.87
HDAC8-217ENST00000478743 ODF3BA8MYP8 253 aa9.64□□□□□ -0.87
HDAC8-217ENST00000478743 C5orf58C9J3I9 102 aa9.64□□□□□ -0.87
HDAC8-217ENST00000478743 NPIPB4C9JG80 1138 aa9.64□□□□□ -0.87
HDAC8-217ENST00000478743 CCL24O00175 119 aa9.64□□□□□ -0.87
HDAC8-217ENST00000478743 RHBDL1O75783 438 aa9.64□□□□□ -0.87
HDAC8-217ENST00000478743 ZCCHC18P0CG32 403 aa9.64□□□□□ -0.87
HDAC8-217ENST00000478743 CCL3L1P16619 93 aa9.64□□□□□ -0.87
HDAC8-217ENST00000478743 HOXB9P17482 250 aaPredicted RBP9.64□□□□□ -0.87
HDAC8-217ENST00000478743 KRT4P19013 534 aa9.64□□□□□ -0.87
HDAC8-217ENST00000478743 POU1F1P28069 291 aa9.64□□□□□ -0.87
HDAC8-217ENST00000478743 LGALS4P56470 323 aa9.64□□□□□ -0.87
HDAC8-217ENST00000478743 KRTAP27-1Q3LI81 207 aa9.64□□□□□ -0.87
HDAC8-217ENST00000478743 CORO6Q6QEF8 472 aa9.64□□□□□ -0.87
HDAC8-217ENST00000478743 ZNF788Q6ZQV5 615 aa9.64□□□□□ -0.87
HDAC8-217ENST00000478743 SATL1Q86VE3 508 aa9.64□□□□□ -0.87
HDAC8-217ENST00000478743 OSR2Q8N2R0 312 aa9.64□□□□□ -0.87
HDAC8-217ENST00000478743 PLPP7Q8NBV4 271 aa9.64□□□□□ -0.87
HDAC8-217ENST00000478743 OR2AE1Q8NHA4 323 aa9.64□□□□□ -0.87
HDAC8-217ENST00000478743 TMEM255BQ8WV15 326 aa9.64□□□□□ -0.87
HDAC8-217ENST00000478743 STX18Q9P2W9 335 aaKnown RBP9.64□□□□□ -0.87
HDAC8-217ENST00000478743 PSMB11A5LHX3 300 aa9.63□□□□□ -0.87
HDAC8-217ENST00000478743 ANP32DO95626 131 aa9.63□□□□□ -0.87
HDAC8-217ENST00000478743 SHBGP04278 402 aa9.63□□□□□ -0.87
HDAC8-217ENST00000478743 ACSM4P0C7M7 580 aa9.63□□□□□ -0.87
HDAC8-217ENST00000478743 MXRA7P84157 204 aa9.63□□□□□ -0.87
HDAC8-217ENST00000478743 MEP1BQ16820 701 aa9.63□□□□□ -0.87
HDAC8-217ENST00000478743 ZNF260Q3ZCT1 412 aa9.63□□□□□ -0.87
HDAC8-217ENST00000478743 ATPAF1Q5TC12 328 aaPredicted RBP9.63□□□□□ -0.87
HDAC8-217ENST00000478743 NKAIN4Q8IVV8 208 aa9.63□□□□□ -0.87
HDAC8-217ENST00000478743 LNX2Q8N448 690 aa9.63□□□□□ -0.87
HDAC8-217ENST00000478743 LRRC75AQ8NAA5 344 aa9.63□□□□□ -0.87
HDAC8-217ENST00000478743 GRPEL1Q9HAV7 217 aa9.63□□□□□ -0.87
HDAC8-217ENST00000478743 ATPIF1Q9UII2 106 aa9.63□□□□□ -0.87
HDAC8-217ENST00000478743 AURKCQ9UQB9 309 aa9.63□□□□□ -0.87
HDAC8-217ENST00000478743 SMIM23A6NLE4 172 aa9.62□□□□□ -0.87
HDAC8-217ENST00000478743 FAM90A22PA8MWA6 464 aa9.62□□□□□ -0.87
HDAC8-217ENST00000478743 GMDSO60547 372 aa9.62□□□□□ -0.87
HDAC8-217ENST00000478743 DEDDO75618 318 aa9.62□□□□□ -0.87
HDAC8-217ENST00000478743 MT-ND1P03886 318 aa9.62□□□□□ -0.87
HDAC8-217ENST00000478743 NR2C1P13056 603 aa9.62□□□□□ -0.87
HDAC8-217ENST00000478743 LBPP18428 481 aa9.62□□□□□ -0.87
HDAC8-217ENST00000478743 GUCA1AP43080 201 aaPredicted RBP9.62□□□□□ -0.87
HDAC8-217ENST00000478743 ENTPD1P49961 510 aa9.62□□□□□ -0.87
HDAC8-217ENST00000478743 CAV3P56539 151 aa9.62□□□□□ -0.87
HDAC8-217ENST00000478743 ZNF92Q03936 586 aa9.62□□□□□ -0.87
HDAC8-217ENST00000478743 SNAI3Q3KNW1 292 aa9.62□□□□□ -0.87
HDAC8-217ENST00000478743 ALG10Q5BKT4 473 aa9.62□□□□□ -0.87
HDAC8-217ENST00000478743 PGAP1Q75T13 922 aa9.62□□□□□ -0.87
HDAC8-217ENST00000478743 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.62□□□□□ -0.87
HDAC8-217ENST00000478743 MSRB3Q8IXL7 192 aa9.62□□□□□ -0.87
HDAC8-217ENST00000478743 OR5M8Q8NGP6 311 aa9.62□□□□□ -0.87
HDAC8-217ENST00000478743 SGTBQ96EQ0 304 aa9.62□□□□□ -0.87
HDAC8-217ENST00000478743 NOL4LQ96MY1 436 aaPredicted RBP9.62□□□□□ -0.87
HDAC8-217ENST00000478743 COQ7Q99807 217 aa9.62□□□□□ -0.87
HDAC8-217ENST00000478743 WACQ9BTA9 647 aa9.62□□□□□ -0.87
HDAC8-217ENST00000478743 C20orf27Q9GZN8 174 aa9.62□□□□□ -0.87
HDAC8-217ENST00000478743 PAIP1Q9H074 479 aaKnown RBP9.62□□□□□ -0.87
HDAC8-217ENST00000478743 RETNQ9HD89 108 aa9.62□□□□□ -0.87
HDAC8-217ENST00000478743 THUMPD1Q9NXG2 353 aaKnown RBP9.62□□□□□ -0.87
HDAC8-217ENST00000478743 VNN3Q9NY84 501 aa9.62□□□□□ -0.87
HDAC8-217ENST00000478743 KIAA1456Q9P272 454 aa9.62□□□□□ -0.87
HDAC8-217ENST00000478743 RPS6KA6Q9UK32 745 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms