RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 VSTM5A8MXK1 200 aa17.06■□□□□ 0.32
ACTB-210ENST00000477812 B9A039 149 aa17.06■□□□□ 0.32
ACTB-210ENST00000477812 MRPS14O60783 128 aaKnown RBP17.06■□□□□ 0.32
ACTB-210ENST00000477812 ATE1O95260 518 aa17.06■□□□□ 0.32
ACTB-210ENST00000477812 GCH1P30793 250 aa17.06■□□□□ 0.32
ACTB-210ENST00000477812 CCR9P51686 369 aa17.06■□□□□ 0.32
ACTB-210ENST00000477812 WNT4P56705 351 aa17.06■□□□□ 0.32
ACTB-210ENST00000477812 TNK1Q13470 666 aa17.06■□□□□ 0.32
ACTB-210ENST00000477812 AGAP6Q5VW22 663 aa17.06■□□□□ 0.32
ACTB-210ENST00000477812 HAVCR2Q8TDQ0 301 aa17.06■□□□□ 0.32
ACTB-210ENST00000477812 GATAD2BQ8WXI9 593 aa17.06■□□□□ 0.32
ACTB-210ENST00000477812 SOX7Q9BT81 388 aa17.06■□□□□ 0.32
ACTB-210ENST00000477812 BABAM2Q9NXR7 383 aa17.06■□□□□ 0.32
ACTB-210ENST00000477812 DUSP13Q9UII6 198 aa17.06■□□□□ 0.32
ACTB-210ENST00000477812 ST6GALNAC2Q9UJ37 374 aa17.06■□□□□ 0.32
ACTB-210ENST00000477812 ZNF391Q9UJN7 358 aa17.06■□□□□ 0.32
ACTB-210ENST00000477812 PURGQ9UJV8 347 aaKnown RBP17.06■□□□□ 0.32
ACTB-210ENST00000477812 ERGIC3Q9Y282 383 aa17.06■□□□□ 0.32
ACTB-210ENST00000477812 SIRT4Q9Y6E7 314 aaPredicted RBP17.06■□□□□ 0.32
ACTB-210ENST00000477812 NAV2Q8IVL1 2488 aa17.05■□□□□ 0.32
ACTB-210ENST00000477812 A0A1B0GTI1 187 aa17.05■□□□□ 0.32
ACTB-210ENST00000477812 OR4C45A6NMZ5 311 aa17.05■□□□□ 0.32
ACTB-210ENST00000477812 MYL12BO14950 172 aa17.05■□□□□ 0.32
ACTB-210ENST00000477812 CD53P19397 219 aa17.05■□□□□ 0.32
ACTB-210ENST00000477812 CCL1P22362 96 aa17.05■□□□□ 0.32
ACTB-210ENST00000477812 EEF1B2P24534 225 aaKnown RBP17.05■□□□□ 0.32
ACTB-210ENST00000477812 MMP15P51511 669 aa17.05■□□□□ 0.32
ACTB-210ENST00000477812 GTF2A1P52655 376 aaPredicted RBP17.05■□□□□ 0.32
ACTB-210ENST00000477812 CHN2P52757 468 aa17.05■□□□□ 0.32
ACTB-210ENST00000477812 GBX2P52951 348 aaPredicted RBP17.05■□□□□ 0.32
ACTB-210ENST00000477812 CDH15P55291 814 aa17.05■□□□□ 0.32
ACTB-210ENST00000477812 FAM3AP98173 230 aa17.05■□□□□ 0.32
ACTB-210ENST00000477812 OR8B8Q15620 311 aa17.05■□□□□ 0.32
ACTB-210ENST00000477812 TIGD6Q17RP2 521 aa17.05■□□□□ 0.32
ACTB-210ENST00000477812 Q6ZSR3 168 aa17.05■□□□□ 0.32
ACTB-210ENST00000477812 PGAP1Q75T13 922 aa17.05■□□□□ 0.32
ACTB-210ENST00000477812 MRPL21Q7Z2W9 205 aaKnown RBP17.05■□□□□ 0.32
ACTB-210ENST00000477812 KLBQ86Z14 1044 aa17.05■□□□□ 0.32
ACTB-210ENST00000477812 PLPP7Q8NBV4 271 aa17.05■□□□□ 0.32
ACTB-210ENST00000477812 OR51E1Q8TCB6 317 aa17.05■□□□□ 0.32
ACTB-210ENST00000477812 LURAP1Q96LR2 239 aa17.05■□□□□ 0.32
ACTB-210ENST00000477812 MND1Q9BWT6 205 aa17.05■□□□□ 0.32
ACTB-210ENST00000477812 GPR84Q9NQS5 396 aa17.05■□□□□ 0.32
ACTB-210ENST00000477812 GTF2A1LQ9UNN4 478 aa17.05■□□□□ 0.32
ACTB-210ENST00000477812 LAMP3Q9UQV4 416 aa17.05■□□□□ 0.32
ACTB-210ENST00000477812 IQCF6A8MYZ5 107 aa17.04■□□□□ 0.32
ACTB-210ENST00000477812 OVOL3O00110 214 aa17.04■□□□□ 0.32
ACTB-210ENST00000477812 LILRA1O75019 489 aa17.04■□□□□ 0.32
ACTB-210ENST00000477812 CFL1P23528 166 aaKnown RBP17.04■□□□□ 0.32
ACTB-210ENST00000477812 ALKBH1Q13686 389 aaKnown RBP17.04■□□□□ 0.32
ACTB-210ENST00000477812 CDK5R1Q15078 307 aa17.04■□□□□ 0.32
ACTB-210ENST00000477812 TBCEQ15813 527 aaPredicted RBP17.04■□□□□ 0.32
ACTB-210ENST00000477812 GFOD2Q3B7J2 385 aa17.04■□□□□ 0.32
ACTB-210ENST00000477812 CCDC58Q4VC31 144 aa17.04■□□□□ 0.32
ACTB-210ENST00000477812 OR2T2Q6IF00 324 aa17.04■□□□□ 0.32
ACTB-210ENST00000477812 GTF3AQ92664 365 aaKnown RBP17.04■□□□□ 0.32
ACTB-210ENST00000477812 OR5M11Q96RB7 305 aa17.04■□□□□ 0.32
ACTB-210ENST00000477812 TRIM36Q9NQ86 728 aa17.04■□□□□ 0.32
ACTB-210ENST00000477812 A0A1B0GWJ7 208 aa17.03■□□□□ 0.32
ACTB-210ENST00000477812 A0A1W2PPW3 197 aa17.03■□□□□ 0.32
ACTB-210ENST00000477812 CD300LBA8K4G0 201 aa17.03■□□□□ 0.32
ACTB-210ENST00000477812 OGG1O15527 345 aa17.03■□□□□ 0.32
ACTB-210ENST00000477812 ACKR3P25106 362 aa17.03■□□□□ 0.32
ACTB-210ENST00000477812 MAP2K4P45985 399 aa17.03■□□□□ 0.32
ACTB-210ENST00000477812 GSK3AP49840 483 aa17.03■□□□□ 0.32
ACTB-210ENST00000477812 ACSM1Q08AH1 577 aa17.03■□□□□ 0.32
ACTB-210ENST00000477812 ZNF773Q6PK81 442 aa17.03■□□□□ 0.32
ACTB-210ENST00000477812 OR56B2PQ8NGI1 322 aa17.03■□□□□ 0.32
ACTB-210ENST00000477812 CCDC90BQ9GZT6 254 aa17.03■□□□□ 0.32
ACTB-210ENST00000477812 TAAR3PQ9P1P4 343 aa17.03■□□□□ 0.32
ACTB-210ENST00000477812 LOC390937A0A1W2PQ73 354 aa17.02■□□□□ 0.32
ACTB-210ENST00000477812 M0R233 179 aa17.02■□□□□ 0.32
ACTB-210ENST00000477812 P2RY10O00398 339 aa17.02■□□□□ 0.32
ACTB-210ENST00000477812 ZFPL1O95159 310 aa17.02■□□□□ 0.32
ACTB-210ENST00000477812 TNFAIP8O95379 198 aa17.02■□□□□ 0.32
ACTB-210ENST00000477812 RAF1P04049 648 aa17.02■□□□□ 0.32
ACTB-210ENST00000477812 ISG15P05161 165 aa17.02■□□□□ 0.32
ACTB-210ENST00000477812 UBCP0CG48 685 aaKnown RBP17.02■□□□□ 0.32
ACTB-210ENST00000477812 SELEP16581 610 aa17.02■□□□□ 0.32
ACTB-210ENST00000477812 ALDH3B1P43353 468 aa17.02■□□□□ 0.32
ACTB-210ENST00000477812 SELENOVP59797 346 aa17.02■□□□□ 0.32
ACTB-210ENST00000477812 SNRPD2P62316 118 aaKnown RBP17.02■□□□□ 0.32
ACTB-210ENST00000477812 SPHARQ15513 63 aa17.02■□□□□ 0.32
ACTB-210ENST00000477812 DMKNQ6E0U4 476 aaPredicted RBP17.02■□□□□ 0.32
ACTB-210ENST00000477812 RPL22L1Q6P5R6 122 aaKnown RBP17.02■□□□□ 0.32
ACTB-210ENST00000477812 Q6ZR03 302 aa17.02■□□□□ 0.32
ACTB-210ENST00000477812 SPARTQ8N0X7 666 aa17.02■□□□□ 0.32
ACTB-210ENST00000477812 CCL19Q99731 98 aa17.02■□□□□ 0.32
ACTB-210ENST00000477812 ZNF696Q9H7X3 374 aa17.02■□□□□ 0.32
ACTB-210ENST00000477812 ACOT13Q9NPJ3 140 aa17.02■□□□□ 0.32
ACTB-210ENST00000477812 PDZD2O15018 2839 aa17.01■□□□□ 0.31
ACTB-210ENST00000477812 LOC107986453A0A1B0GWG9 222 aa17.01■□□□□ 0.31
ACTB-210ENST00000477812 ZSCAN5BA6NJL1 495 aa17.01■□□□□ 0.31
ACTB-210ENST00000477812 H7C417 338 aa17.01■□□□□ 0.31
ACTB-210ENST00000477812 TIMM8AO60220 97 aaPredicted RBP17.01■□□□□ 0.31
ACTB-210ENST00000477812 PCMT1P22061 227 aa17.01■□□□□ 0.31
ACTB-210ENST00000477812 PPOXP50336 477 aa17.01■□□□□ 0.31
ACTB-210ENST00000477812 BDH1Q02338 343 aa17.01■□□□□ 0.31
ACTB-210ENST00000477812 EMX1Q04741 257 aaPredicted RBP17.01■□□□□ 0.31
ACTB-210ENST00000477812 KRT74Q7RTS7 529 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms