RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 RPUSD3Q6P087 351 aaKnown RBP6.96□□□□□ -1.3
VMA21-203ENST00000477649 FAM57BQ71RH2 274 aa6.96□□□□□ -1.3
VMA21-203ENST00000477649 KRT74Q7RTS7 529 aa6.96□□□□□ -1.3
VMA21-203ENST00000477649 VASH2Q86V25 355 aa6.96□□□□□ -1.3
VMA21-203ENST00000477649 ZADH2Q8N4Q0 377 aa6.96□□□□□ -1.3
VMA21-203ENST00000477649 DNAAF1Q8NEP3 725 aa6.96□□□□□ -1.3
VMA21-203ENST00000477649 FDCSPQ8NFU4 85 aa6.96□□□□□ -1.3
VMA21-203ENST00000477649 OR51D1Q8NGF3 324 aa6.96□□□□□ -1.3
VMA21-203ENST00000477649 OR1J2Q8NGS2 313 aa6.96□□□□□ -1.3
VMA21-203ENST00000477649 OR14K1Q8NGZ2 314 aa6.96□□□□□ -1.3
VMA21-203ENST00000477649 KCNG3Q8TAE7 436 aa6.96□□□□□ -1.3
VMA21-203ENST00000477649 SNRNP27Q8WVK2 155 aaKnown RBP6.96□□□□□ -1.3
VMA21-203ENST00000477649 NANOS1Q8WY41 292 aaKnown RBP6.96□□□□□ -1.3
VMA21-203ENST00000477649 PPP1R14AQ96A00 147 aa6.96□□□□□ -1.3
VMA21-203ENST00000477649 FAM46BQ96A09 425 aa6.96□□□□□ -1.3
VMA21-203ENST00000477649 ORAI1Q96D31 301 aa6.96□□□□□ -1.3
VMA21-203ENST00000477649 FBXO17Q96EF6 278 aa6.96□□□□□ -1.3
VMA21-203ENST00000477649 WDYHV1Q96HA8 205 aa6.96□□□□□ -1.3
VMA21-203ENST00000477649 GMPPAQ96IJ6 420 aaPredicted RBP6.96□□□□□ -1.3
VMA21-203ENST00000477649 ZNF845Q96IR2 970 aaPredicted RBP6.96□□□□□ -1.3
VMA21-203ENST00000477649 TRAF4Q9BUZ4 470 aaPredicted RBP6.96□□□□□ -1.3
VMA21-203ENST00000477649 HES7Q9BYE0 225 aa6.96□□□□□ -1.3
VMA21-203ENST00000477649 OR2H1Q9GZK4 316 aa6.96□□□□□ -1.3
VMA21-203ENST00000477649 CHST5Q9GZS9 411 aa6.96□□□□□ -1.3
VMA21-203ENST00000477649 PRDM14Q9GZV8 571 aa6.96□□□□□ -1.3
VMA21-203ENST00000477649 PCDHB16Q9NRJ7 776 aa6.96□□□□□ -1.3
VMA21-203ENST00000477649 FAM86C1Q9NVL1 165 aa6.96□□□□□ -1.3
VMA21-203ENST00000477649 DLL3Q9NYJ7 618 aa6.96□□□□□ -1.3
VMA21-203ENST00000477649 UPB1Q9UBR1 384 aa6.96□□□□□ -1.3
VMA21-203ENST00000477649 MTFP1Q9UDX5 166 aa6.96□□□□□ -1.3
VMA21-203ENST00000477649 A0A087WV48 116 aa6.95□□□□□ -1.3
VMA21-203ENST00000477649 A0A0B4J203 849 aa6.95□□□□□ -1.3
VMA21-203ENST00000477649 TMEM272A0A1B0GTI8 110 aa6.95□□□□□ -1.3
VMA21-203ENST00000477649 LINC00854A0A1B0GVQ3 168 aa6.95□□□□□ -1.3
VMA21-203ENST00000477649 ANKRD20A5PA0PJZ0 165 aa6.95□□□□□ -1.3
VMA21-203ENST00000477649 DCDC2BA2VCK2 349 aa6.95□□□□□ -1.3
VMA21-203ENST00000477649 SLC22A20A6NK97 555 aa6.95□□□□□ -1.3
VMA21-203ENST00000477649 F5H5K5 113 aa6.95□□□□□ -1.3
VMA21-203ENST00000477649 INMT-MINDY4F8WBC2 141 aa6.95□□□□□ -1.3
VMA21-203ENST00000477649 SS18L1O75177 396 aaPredicted RBP6.95□□□□□ -1.3
VMA21-203ENST00000477649 LPLP06858 475 aa6.95□□□□□ -1.3
VMA21-203ENST00000477649 CELA3AP09093 270 aa6.95□□□□□ -1.3
VMA21-203ENST00000477649 CD3GP09693 182 aa6.95□□□□□ -1.3
VMA21-203ENST00000477649 ZNF32P17041 273 aa6.95□□□□□ -1.3
VMA21-203ENST00000477649 TBPP20226 339 aa6.95□□□□□ -1.3
VMA21-203ENST00000477649 MPGP29372 298 aa6.95□□□□□ -1.3
VMA21-203ENST00000477649 HTR5AP47898 357 aa6.95□□□□□ -1.3
VMA21-203ENST00000477649 CLDN12P56749 244 aa6.95□□□□□ -1.3
VMA21-203ENST00000477649 DGCR2P98153 550 aa6.95□□□□□ -1.3
VMA21-203ENST00000477649 GALK2Q01415 458 aa6.95□□□□□ -1.3
VMA21-203ENST00000477649 TGFBR3Q03167 851 aa6.95□□□□□ -1.3
VMA21-203ENST00000477649 PLP2Q04941 152 aa6.95□□□□□ -1.3
VMA21-203ENST00000477649 SRYQ05066 204 aa6.95□□□□□ -1.3
VMA21-203ENST00000477649 SPOCK1Q08629 439 aa6.95□□□□□ -1.3
VMA21-203ENST00000477649 RIPPLY1Q0D2K3 151 aa6.95□□□□□ -1.3
VMA21-203ENST00000477649 CNN3Q15417 329 aaKnown RBP6.95□□□□□ -1.3
VMA21-203ENST00000477649 EIF2S3LQ2VIR3 472 aaKnown RBP6.95□□□□□ -1.3
VMA21-203ENST00000477649 ATP1A1-AS1Q5TC04 95 aa6.95□□□□□ -1.3
VMA21-203ENST00000477649 TSPO2Q5TGU0 170 aa6.95□□□□□ -1.3
VMA21-203ENST00000477649 OTPQ5XKR4 325 aa6.95□□□□□ -1.3
VMA21-203ENST00000477649 RTL6Q6ICC9 239 aa6.95□□□□□ -1.3
VMA21-203ENST00000477649 OR2A2Q6IF42 318 aa6.95□□□□□ -1.3
VMA21-203ENST00000477649 TMEM53Q6P2H8 277 aa6.95□□□□□ -1.3
VMA21-203ENST00000477649 BTN2A1Q7KYR7 527 aa6.95□□□□□ -1.3
VMA21-203ENST00000477649 SIAH3Q8IW03 269 aa6.95□□□□□ -1.3
VMA21-203ENST00000477649 LRRC18Q8N456 261 aa6.95□□□□□ -1.3
VMA21-203ENST00000477649 CELF2-AS1Q8N7Q2 184 aa6.95□□□□□ -1.3
VMA21-203ENST00000477649 SEMA6DQ8NFY4 1073 aa6.95□□□□□ -1.3
VMA21-203ENST00000477649 OR56B4Q8NH76 319 aa6.95□□□□□ -1.3
VMA21-203ENST00000477649 FNDC9Q8TBE3 224 aa6.95□□□□□ -1.3
VMA21-203ENST00000477649 ADAT3Q96EY9 351 aaPredicted RBP6.95□□□□□ -1.3
VMA21-203ENST00000477649 NEDD4LQ96PU5 975 aa6.95□□□□□ -1.3
VMA21-203ENST00000477649 ALKBH3Q96Q83 286 aaPredicted RBP6.95□□□□□ -1.3
VMA21-203ENST00000477649 URM1Q9BTM9 101 aaKnown RBP6.95□□□□□ -1.3
VMA21-203ENST00000477649 CACNG6Q9BXT2 260 aa6.95□□□□□ -1.3
VMA21-203ENST00000477649 CST11Q9H112 138 aa6.95□□□□□ -1.3
VMA21-203ENST00000477649 ATG5Q9H1Y0 275 aa6.95□□□□□ -1.3
VMA21-203ENST00000477649 MOV10Q9HCE1 1003 aaKnown RBP6.95□□□□□ -1.3
VMA21-203ENST00000477649 NLKQ9UBE8 527 aa6.95□□□□□ -1.3
VMA21-203ENST00000477649 CLEC4AQ9UMR7 237 aa6.95□□□□□ -1.3
VMA21-203ENST00000477649 KCNMB2Q9Y691 235 aa6.95□□□□□ -1.3
VMA21-203ENST00000477649 FREM3P0C091 2139 aa6.95□□□□□ -1.3
VMA21-203ENST00000477649 AHCTF1Q8WYP5 2266 aa6.94□□□□□ -1.3
VMA21-203ENST00000477649 CIB4A0PJX0 185 aa6.94□□□□□ -1.3
VMA21-203ENST00000477649 AHRRA9YTQ3 701 aa6.94□□□□□ -1.3
VMA21-203ENST00000477649 ZNF780AO75290 641 aaPredicted RBP6.94□□□□□ -1.3
VMA21-203ENST00000477649 CCNKO75909 580 aa6.94□□□□□ -1.3
VMA21-203ENST00000477649 SNAPC5O75971 98 aa6.94□□□□□ -1.3
VMA21-203ENST00000477649 TCRBP04435 133 aa6.94□□□□□ -1.3
VMA21-203ENST00000477649 MELTFP08582 738 aa6.94□□□□□ -1.3
VMA21-203ENST00000477649 HCKP08631 526 aa6.94□□□□□ -1.3
VMA21-203ENST00000477649 MMP7P09237 267 aaPredicted RBP6.94□□□□□ -1.3
VMA21-203ENST00000477649 B4GALT1P15291 398 aa6.94□□□□□ -1.3
VMA21-203ENST00000477649 NTF4P34130 210 aa6.94□□□□□ -1.3
VMA21-203ENST00000477649 PTGER4P35408 488 aa6.94□□□□□ -1.3
VMA21-203ENST00000477649 RFC3P40938 356 aa6.94□□□□□ -1.3
VMA21-203ENST00000477649 OR3A2P47893 321 aa6.94□□□□□ -1.3
VMA21-203ENST00000477649 TAS2R19P59542 299 aa6.94□□□□□ -1.3
VMA21-203ENST00000477649 PSG4Q00888 419 aa6.94□□□□□ -1.3
VMA21-203ENST00000477649 ZNF169Q14929 603 aaPredicted RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms