RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 C1QL2Q7Z5L3 287 aa18.25■□□□□ 0.51
COL9A3-211ENST00000477612 KLBQ86Z14 1044 aa18.25■□□□□ 0.51
COL9A3-211ENST00000477612 ZNF454Q8N9F8 522 aa18.25■□□□□ 0.51
COL9A3-211ENST00000477612 ZMYND19Q96E35 227 aaPredicted RBP18.25■□□□□ 0.51
COL9A3-211ENST00000477612 AMELYQ99218 206 aa18.25■□□□□ 0.51
COL9A3-211ENST00000477612 TEX12Q9BXU0 123 aa18.25■□□□□ 0.51
COL9A3-211ENST00000477612 PAPOLBQ9NRJ5 636 aaKnown RBP18.25■□□□□ 0.51
COL9A3-211ENST00000477612 A0A0A6YYJ9 748 aa18.24■□□□□ 0.51
COL9A3-211ENST00000477612 GGT3PA6NGU5 568 aa18.24■□□□□ 0.51
COL9A3-211ENST00000477612 LRRC30A6NM36 301 aa18.24■□□□□ 0.51
COL9A3-211ENST00000477612 CEACAM18A8MTB9 384 aa18.24■□□□□ 0.51
COL9A3-211ENST00000477612 CA6P23280 308 aa18.24■□□□□ 0.51
COL9A3-211ENST00000477612 HSD11B1P28845 292 aa18.24■□□□□ 0.51
COL9A3-211ENST00000477612 OR8G1Q15617 311 aa18.24■□□□□ 0.51
COL9A3-211ENST00000477612 ATP6AP1Q15904 470 aa18.24■□□□□ 0.51
COL9A3-211ENST00000477612 TMEM236Q5W0B7 351 aa18.24■□□□□ 0.51
COL9A3-211ENST00000477612 SPERTQ8NA61 448 aa18.24■□□□□ 0.51
COL9A3-211ENST00000477612 SGK3Q96BR1 496 aa18.24■□□□□ 0.51
COL9A3-211ENST00000477612 OPN4Q9UHM6 478 aa18.24■□□□□ 0.51
COL9A3-211ENST00000477612 LOC105371242A0A075B767 164 aa18.23■□□□□ 0.51
COL9A3-211ENST00000477612 LYNP07948 512 aa18.23■□□□□ 0.51
COL9A3-211ENST00000477612 SEC61A1P61619 476 aaKnown RBP18.23■□□□□ 0.51
COL9A3-211ENST00000477612 ESRRGP62508 458 aa18.23■□□□□ 0.51
COL9A3-211ENST00000477612 FAM3AP98173 230 aa18.23■□□□□ 0.51
COL9A3-211ENST00000477612 ZNF404Q494X3 552 aa18.23■□□□□ 0.51
COL9A3-211ENST00000477612 SPATC1Q76KD6 591 aa18.23■□□□□ 0.51
COL9A3-211ENST00000477612 OR56B2PQ8NGI1 322 aa18.23■□□□□ 0.51
COL9A3-211ENST00000477612 OR52H1Q8NGJ2 320 aa18.23■□□□□ 0.51
COL9A3-211ENST00000477612 C7orf69Q9H7B7 122 aa18.23■□□□□ 0.51
COL9A3-211ENST00000477612 MIOXQ9UGB7 285 aa18.23■□□□□ 0.51
COL9A3-211ENST00000477612 LRCH1Q9Y2L9 728 aa18.23■□□□□ 0.51
COL9A3-211ENST00000477612 PPIAL4AQ9Y536 164 aa18.23■□□□□ 0.51
COL9A3-211ENST00000477612 TRAPPC2LH3BP13 241 aa18.22■□□□□ 0.51
COL9A3-211ENST00000477612 SELENOFO60613 162 aa18.22■□□□□ 0.51
COL9A3-211ENST00000477612 FSHBP01225 129 aa18.22■□□□□ 0.51
COL9A3-211ENST00000477612 PTGES3Q15185 160 aaKnown RBP18.22■□□□□ 0.51
COL9A3-211ENST00000477612 MPPED2Q15777 294 aa18.22■□□□□ 0.51
COL9A3-211ENST00000477612 KLHL12Q53G59 568 aa18.22■□□□□ 0.51
COL9A3-211ENST00000477612 ZNF771Q7L3S4 317 aaPredicted RBP18.22■□□□□ 0.51
COL9A3-211ENST00000477612 SLC16A9Q7RTY1 509 aa18.22■□□□□ 0.51
COL9A3-211ENST00000477612 PLEKHA8Q96JA3 519 aa18.22■□□□□ 0.51
COL9A3-211ENST00000477612 TMEM246Q9BRR3 403 aa18.22■□□□□ 0.51
COL9A3-211ENST00000477612 ADAT1Q9BUB4 502 aaKnown RBP18.22■□□□□ 0.51
COL9A3-211ENST00000477612 MMP26Q9NRE1 261 aa18.22■□□□□ 0.51
COL9A3-211ENST00000477612 ZNF319Q9P2F9 582 aa18.22■□□□□ 0.51
COL9A3-211ENST00000477612 AP4S1Q9Y587 144 aa18.22■□□□□ 0.51
COL9A3-211ENST00000477612 STAB1Q9NY15 2570 aa18.22■□□□□ 0.51
COL9A3-211ENST00000477612 IGHV3-64DA0A0J9YX35 117 aa18.21■□□□□ 0.51
COL9A3-211ENST00000477612 FAM20BO75063 409 aa18.21■□□□□ 0.51
COL9A3-211ENST00000477612 ANXA2P07355 339 aaKnown RBP18.21■□□□□ 0.51
COL9A3-211ENST00000477612 H2BFMP0C1H6 154 aa18.21■□□□□ 0.51
COL9A3-211ENST00000477612 IRF2P14316 349 aa18.21■□□□□ 0.51
COL9A3-211ENST00000477612 ZNF12P17014 697 aa18.21■□□□□ 0.51
COL9A3-211ENST00000477612 ALOX5APP20292 161 aa18.21■□□□□ 0.51
COL9A3-211ENST00000477612 CFL1P23528 166 aaKnown RBP18.21■□□□□ 0.51
COL9A3-211ENST00000477612 ZNF121P58317 390 aaPredicted RBP18.21■□□□□ 0.51
COL9A3-211ENST00000477612 EFNB1P98172 346 aa18.21■□□□□ 0.51
COL9A3-211ENST00000477612 SRSF2Q01130 221 aaKnown RBP18.21■□□□□ 0.51
COL9A3-211ENST00000477612 SNAPC1Q16533 368 aa18.21■□□□□ 0.51
COL9A3-211ENST00000477612 ESCO2Q56NI9 601 aa18.21■□□□□ 0.51
COL9A3-211ENST00000477612 PRAMEF6Q5VXH4 476 aa18.21■□□□□ 0.51
COL9A3-211ENST00000477612 DEFB108BQ8NET1 73 aa18.21■□□□□ 0.51
COL9A3-211ENST00000477612 BBS1Q8NFJ9 593 aa18.21■□□□□ 0.51
COL9A3-211ENST00000477612 OR11L1Q8NGX0 322 aa18.21■□□□□ 0.51
COL9A3-211ENST00000477612 NANPQ8TBE9 248 aa18.21■□□□□ 0.51
COL9A3-211ENST00000477612 TEAD3Q99594 435 aa18.21■□□□□ 0.51
COL9A3-211ENST00000477612 GABARAPL1Q9H0R8 117 aa18.21■□□□□ 0.51
COL9A3-211ENST00000477612 TVP23BQ9NYZ1 205 aa18.21■□□□□ 0.51
COL9A3-211ENST00000477612 KIF17Q9P2E2 1029 aa18.21■□□□□ 0.51
COL9A3-211ENST00000477612 INSIG2Q9Y5U4 225 aa18.21■□□□□ 0.51
COL9A3-211ENST00000477612 hCG_38984A0A1B0GV85 526 aa18.2■□□□□ 0.5
COL9A3-211ENST00000477612 G3V2T6 193 aa18.2■□□□□ 0.5
COL9A3-211ENST00000477612 TBX1O43435 398 aa18.2■□□□□ 0.5
COL9A3-211ENST00000477612 ZNF205O95201 554 aa18.2■□□□□ 0.5
COL9A3-211ENST00000477612 FASP25445 335 aa18.2■□□□□ 0.5
COL9A3-211ENST00000477612 PAX2Q02962 417 aa18.2■□□□□ 0.5
COL9A3-211ENST00000477612 MZT1Q08AG7 82 aa18.2■□□□□ 0.5
COL9A3-211ENST00000477612 TIGD6Q17RP2 521 aa18.2■□□□□ 0.5
COL9A3-211ENST00000477612 FAM201AQ5SY85 155 aa18.2■□□□□ 0.5
COL9A3-211ENST00000477612 C1orf146Q5VVC0 180 aa18.2■□□□□ 0.5
COL9A3-211ENST00000477612 KDM4DQ6B0I6 523 aa18.2■□□□□ 0.5
COL9A3-211ENST00000477612 USP43Q70EL4 1123 aa18.2■□□□□ 0.5
COL9A3-211ENST00000477612 FAM57BQ71RH2 274 aa18.2■□□□□ 0.5
COL9A3-211ENST00000477612 THEM6Q8WUY1 208 aa18.2■□□□□ 0.5
COL9A3-211ENST00000477612 REEP6Q96HR9 211 aa18.2■□□□□ 0.5
COL9A3-211ENST00000477612 C19orf24Q9BVV8 132 aa18.2■□□□□ 0.5
COL9A3-211ENST00000477612 YIPF3Q9GZM5 350 aa18.2■□□□□ 0.5
COL9A3-211ENST00000477612 RGCCQ9H4X1 137 aa18.2■□□□□ 0.5
COL9A3-211ENST00000477612 NIPAL2Q9H841 368 aa18.2■□□□□ 0.5
COL9A3-211ENST00000477612 FN3KRPQ9HA64 309 aa18.2■□□□□ 0.5
COL9A3-211ENST00000477612 N6AMT1Q9Y5N5 214 aa18.2■□□□□ 0.5
COL9A3-211ENST00000477612 EPHA1P21709 976 aa18.19■□□□□ 0.5
COL9A3-211ENST00000477612 ZNF154Q13106 437 aa18.19■□□□□ 0.5
COL9A3-211ENST00000477612 APOFQ13790 326 aa18.19■□□□□ 0.5
COL9A3-211ENST00000477612 DEGS2Q6QHC5 323 aa18.19■□□□□ 0.5
COL9A3-211ENST00000477612 DCDC5Q6ZRR9 648 aa18.19■□□□□ 0.5
COL9A3-211ENST00000477612 HIST2H2ABQ8IUE6 130 aaPredicted RBP18.19■□□□□ 0.5
COL9A3-211ENST00000477612 DACT3Q96B18 629 aaPredicted RBP18.19■□□□□ 0.5
COL9A3-211ENST00000477612 NEIL1Q96FI4 390 aaPredicted RBP18.19■□□□□ 0.5
COL9A3-211ENST00000477612 SSBP3Q9BWW4 388 aaPredicted RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms