RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 ZNF250P15622 560 aa13.13□□□□□ -0.31
SEC13-215ENST00000477547 SERPINF1P36955 418 aa13.13□□□□□ -0.31
SEC13-215ENST00000477547 KIR3DL2P43630 455 aa13.13□□□□□ -0.31
SEC13-215ENST00000477547 CDH15P55291 814 aa13.13□□□□□ -0.31
SEC13-215ENST00000477547 ZNF92Q03936 586 aa13.13□□□□□ -0.31
SEC13-215ENST00000477547 GK2Q14410 553 aaPredicted RBP13.13□□□□□ -0.31
SEC13-215ENST00000477547 IRF3Q14653 427 aa13.13□□□□□ -0.31
SEC13-215ENST00000477547 EFNB3Q15768 340 aa13.13□□□□□ -0.31
SEC13-215ENST00000477547 TBCEQ15813 527 aaPredicted RBP13.13□□□□□ -0.31
SEC13-215ENST00000477547 RNLSQ5VYX0 342 aa13.13□□□□□ -0.31
SEC13-215ENST00000477547 LRP11Q86VZ4 500 aa13.13□□□□□ -0.31
SEC13-215ENST00000477547 OR2G2Q8NGZ5 317 aa13.13□□□□□ -0.31
SEC13-215ENST00000477547 RNF166Q96A37 237 aaPredicted RBP13.13□□□□□ -0.31
SEC13-215ENST00000477547 RGCCQ9H4X1 137 aa13.13□□□□□ -0.31
SEC13-215ENST00000477547 MYEF2Q9P2K5 600 aaKnown RBP13.13□□□□□ -0.31
SEC13-215ENST00000477547 SLC22A13Q9Y226 551 aa13.13□□□□□ -0.31
SEC13-215ENST00000477547 FBN3Q75N90 2809 aa13.13□□□□□ -0.31
SEC13-215ENST00000477547 ABCA2Q9BZC7 2435 aa13.13□□□□□ -0.31
SEC13-215ENST00000477547 IGLV3-9A0A075B6K5 115 aa13.13□□□□□ -0.31
SEC13-215ENST00000477547 A0A0U1RQV5 110 aa13.13□□□□□ -0.31
SEC13-215ENST00000477547 hCG_38984A0A1B0GV85 526 aa13.13□□□□□ -0.31
SEC13-215ENST00000477547 E9PI62 339 aa13.13□□□□□ -0.31
SEC13-215ENST00000477547 TIMM8AO60220 97 aaPredicted RBP13.13□□□□□ -0.31
SEC13-215ENST00000477547 SOD3P08294 240 aa13.13□□□□□ -0.31
SEC13-215ENST00000477547 RAC2P15153 192 aa13.13□□□□□ -0.31
SEC13-215ENST00000477547 CFL1P23528 166 aaKnown RBP13.13□□□□□ -0.31
SEC13-215ENST00000477547 SELENOVP59797 346 aa13.13□□□□□ -0.31
SEC13-215ENST00000477547 NANOS3P60323 173 aaKnown RBP13.13□□□□□ -0.31
SEC13-215ENST00000477547 SNRPD2P62316 118 aaKnown RBP13.13□□□□□ -0.31
SEC13-215ENST00000477547 ODF4Q2M2E3 257 aa13.13□□□□□ -0.31
SEC13-215ENST00000477547 TMEM255AQ5JRV8 349 aa13.13□□□□□ -0.31
SEC13-215ENST00000477547 AGAP6Q5VW22 663 aa13.13□□□□□ -0.31
SEC13-215ENST00000477547 XAF1Q6GPH4 301 aa13.13□□□□□ -0.31
SEC13-215ENST00000477547 FDX2Q6P4F2 183 aa13.13□□□□□ -0.31
SEC13-215ENST00000477547 PAMR1Q6UXH9 720 aa13.13□□□□□ -0.31
SEC13-215ENST00000477547 PGAP1Q75T13 922 aa13.13□□□□□ -0.31
SEC13-215ENST00000477547 DTX2Q86UW9 622 aa13.13□□□□□ -0.31
SEC13-215ENST00000477547 EGFL6Q8IUX8 553 aa13.13□□□□□ -0.31
SEC13-215ENST00000477547 ELMOD2Q8IZ81 293 aa13.13□□□□□ -0.31
SEC13-215ENST00000477547 PRSS35Q8N3Z0 413 aa13.13□□□□□ -0.31
SEC13-215ENST00000477547 SVOPQ8N4V2 548 aa13.13□□□□□ -0.31
SEC13-215ENST00000477547 NANOGP1Q8N7R0 232 aa13.13□□□□□ -0.31
SEC13-215ENST00000477547 ZNF485Q8NCK3 441 aa13.13□□□□□ -0.31
SEC13-215ENST00000477547 GATAD2BQ8WXI9 593 aa13.13□□□□□ -0.31
SEC13-215ENST00000477547 NRGNQ92686 78 aa13.13□□□□□ -0.31
SEC13-215ENST00000477547 SPSB4Q96A44 273 aa13.13□□□□□ -0.31
SEC13-215ENST00000477547 CCL19Q99731 98 aa13.13□□□□□ -0.31
SEC13-215ENST00000477547 DYNLRB1Q9NP97 96 aa13.13□□□□□ -0.31
SEC13-215ENST00000477547 ZNF391Q9UJN7 358 aa13.13□□□□□ -0.31
SEC13-215ENST00000477547 TANC2Q9HCD6 1990 aa13.12□□□□□ -0.31
SEC13-215ENST00000477547 ZNF469Q96JG9 3925 aaPredicted RBP13.12□□□□□ -0.31
SEC13-215ENST00000477547 LOC107986453A0A1B0GWG9 222 aa13.12□□□□□ -0.31
SEC13-215ENST00000477547 GGT3PA6NGU5 568 aa13.12□□□□□ -0.31
SEC13-215ENST00000477547 B9A039 149 aa13.12□□□□□ -0.31
SEC13-215ENST00000477547 M0R233 179 aa13.12□□□□□ -0.31
SEC13-215ENST00000477547 MRPS14O60783 128 aaKnown RBP13.12□□□□□ -0.31
SEC13-215ENST00000477547 LALBAP00709 142 aa13.12□□□□□ -0.31
SEC13-215ENST00000477547 DANCRP0C864 163 aa13.12□□□□□ -0.31
SEC13-215ENST00000477547 UBCP0CG48 685 aaKnown RBP13.12□□□□□ -0.31
SEC13-215ENST00000477547 MAP2K4P45985 399 aa13.12□□□□□ -0.31
SEC13-215ENST00000477547 TGM4P49221 684 aa13.12□□□□□ -0.31
SEC13-215ENST00000477547 GTF2A1P52655 376 aaPredicted RBP13.12□□□□□ -0.31
SEC13-215ENST00000477547 TAS2R43P59537 309 aa13.12□□□□□ -0.31
SEC13-215ENST00000477547 PSG7Q13046 419 aa13.12□□□□□ -0.31
SEC13-215ENST00000477547 ALKBH1Q13686 389 aaKnown RBP13.12□□□□□ -0.31
SEC13-215ENST00000477547 DOC2BQ14184 412 aa13.12□□□□□ -0.31
SEC13-215ENST00000477547 CDK5R1Q15078 307 aa13.12□□□□□ -0.31
SEC13-215ENST00000477547 MED22Q15528 200 aa13.12□□□□□ -0.31
SEC13-215ENST00000477547 NKPD1Q17RQ9 610 aa13.12□□□□□ -0.31
SEC13-215ENST00000477547 ZNF773Q6PK81 442 aa13.12□□□□□ -0.31
SEC13-215ENST00000477547 OR5AS1Q8N127 324 aa13.12□□□□□ -0.31
SEC13-215ENST00000477547 BHLHE23Q8NDY6 225 aa13.12□□□□□ -0.31
SEC13-215ENST00000477547 OR56B2PQ8NGI1 322 aa13.12□□□□□ -0.31
SEC13-215ENST00000477547 OR51E1Q8TCB6 317 aa13.12□□□□□ -0.31
SEC13-215ENST00000477547 PPP1R14AQ96A00 147 aa13.12□□□□□ -0.31
SEC13-215ENST00000477547 SGK3Q96BR1 496 aa13.12□□□□□ -0.31
SEC13-215ENST00000477547 CMBLQ96DG6 245 aa13.12□□□□□ -0.31
SEC13-215ENST00000477547 FAM71F1Q96KD3 344 aaPredicted RBP13.12□□□□□ -0.31
SEC13-215ENST00000477547 LYZL4Q96KX0 146 aa13.12□□□□□ -0.31
SEC13-215ENST00000477547 OR5M11Q96RB7 305 aa13.12□□□□□ -0.31
SEC13-215ENST00000477547 TRAF4Q9BUZ4 470 aaPredicted RBP13.12□□□□□ -0.31
SEC13-215ENST00000477547 GPR84Q9NQS5 396 aa13.12□□□□□ -0.31
SEC13-215ENST00000477547 CBLN4Q9NTU7 201 aa13.12□□□□□ -0.31
SEC13-215ENST00000477547 ST6GALNAC2Q9UJ37 374 aa13.12□□□□□ -0.31
SEC13-215ENST00000477547 PURGQ9UJV8 347 aaKnown RBP13.12□□□□□ -0.31
SEC13-215ENST00000477547 LAMP3Q9UQV4 416 aa13.12□□□□□ -0.31
SEC13-215ENST00000477547 LSM2Q9Y333 95 aaKnown RBP13.12□□□□□ -0.31
SEC13-215ENST00000477547 A0A1B0GVI7 797 aa13.11□□□□□ -0.31
SEC13-215ENST00000477547 P2RY10O00398 339 aa13.11□□□□□ -0.31
SEC13-215ENST00000477547 IGHV3-13P01766 116 aa13.11□□□□□ -0.31
SEC13-215ENST00000477547 SELEP16581 610 aa13.11□□□□□ -0.31
SEC13-215ENST00000477547 KITLGP21583 273 aa13.11□□□□□ -0.31
SEC13-215ENST00000477547 CCR9P51686 369 aa13.11□□□□□ -0.31
SEC13-215ENST00000477547 ART1P52961 327 aa13.11□□□□□ -0.31
SEC13-215ENST00000477547 SPHARQ15513 63 aa13.11□□□□□ -0.31
SEC13-215ENST00000477547 ALKBH6Q3KRA9 238 aa13.11□□□□□ -0.31
SEC13-215ENST00000477547 OR2T2Q6IF00 324 aa13.11□□□□□ -0.31
SEC13-215ENST00000477547 C11orf71Q6IPW1 123 aa13.11□□□□□ -0.31
SEC13-215ENST00000477547 ZFP41Q8N8Y5 198 aa13.11□□□□□ -0.31
SEC13-215ENST00000477547 HAVCR1Q96D42 359 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms