RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 TFDP2Q14188 446 aa3.52□□□□□ -1.85
VPS50-212ENST00000476413 OR52P1PQ8NH57 321 aa3.52□□□□□ -1.85
VPS50-212ENST00000476413 OR10G6Q8NH81 332 aa3.52□□□□□ -1.85
VPS50-212ENST00000476413 ESR2Q92731 530 aa3.52□□□□□ -1.85
VPS50-212ENST00000476413 UBE2E2Q96LR5 201 aa3.52□□□□□ -1.85
VPS50-212ENST00000476413 SCGB3A2Q96PL1 93 aa3.52□□□□□ -1.85
VPS50-212ENST00000476413 FGF23Q9GZV9 251 aaPredicted RBP3.52□□□□□ -1.85
VPS50-212ENST00000476413 HYOU1Q9Y4L1 999 aa3.52□□□□□ -1.85
VPS50-212ENST00000476413 PTPRTO14522 1441 aa3.52□□□□□ -1.85
VPS50-212ENST00000476413 TNIKQ9UKE5 1360 aa3.51□□□□□ -1.85
VPS50-212ENST00000476413 C5orf63A6NC05 138 aa3.51□□□□□ -1.85
VPS50-212ENST00000476413 RBFOX2O43251 390 aaKnown RBP eCLIP3.51□□□□□ -1.85
VPS50-212ENST00000476413 CTNSO60931 367 aa3.51□□□□□ -1.85
VPS50-212ENST00000476413 FOXH1O75593 365 aa3.51□□□□□ -1.85
VPS50-212ENST00000476413 SLC22A5O76082 557 aa3.51□□□□□ -1.85
VPS50-212ENST00000476413 RHOXF2BP0C7M4 288 aa3.51□□□□□ -1.85
VPS50-212ENST00000476413 OR56A5P0C7T3 313 aa3.51□□□□□ -1.85
VPS50-212ENST00000476413 LINC00869P0C866 280 aa3.51□□□□□ -1.85
VPS50-212ENST00000476413 LOXP28300 417 aaPredicted RBP3.51□□□□□ -1.85
VPS50-212ENST00000476413 TAS2R46P59540 309 aa3.51□□□□□ -1.85
VPS50-212ENST00000476413 OR2B8PP59922 312 aa3.51□□□□□ -1.85
VPS50-212ENST00000476413 EIF4EBP1Q13541 118 aaPredicted RBP3.51□□□□□ -1.85
VPS50-212ENST00000476413 MPV17L2Q567V2 206 aa3.51□□□□□ -1.85
VPS50-212ENST00000476413 FBXW9Q5XUX1 488 aa3.51□□□□□ -1.85
VPS50-212ENST00000476413 FAM71E1Q6IPT2 247 aa3.51□□□□□ -1.85
VPS50-212ENST00000476413 NANOGP8Q6NSW7 305 aa3.51□□□□□ -1.85
VPS50-212ENST00000476413 SNX20Q7Z614 316 aa3.51□□□□□ -1.85
VPS50-212ENST00000476413 LGI3Q8N145 548 aa3.51□□□□□ -1.85
VPS50-212ENST00000476413 FBXO36Q8NEA4 188 aa3.51□□□□□ -1.85
VPS50-212ENST00000476413 BAALCQ8WXS3 180 aa3.51□□□□□ -1.85
VPS50-212ENST00000476413 FRZBQ92765 325 aa3.51□□□□□ -1.85
VPS50-212ENST00000476413 STARD4Q96DR4 205 aa3.51□□□□□ -1.85
VPS50-212ENST00000476413 FAM19A4Q96LR4 140 aa3.51□□□□□ -1.85
VPS50-212ENST00000476413 TMEM243Q9BU79 118 aa3.51□□□□□ -1.85
VPS50-212ENST00000476413 C8orf17Q9NRJ1 99 aa3.51□□□□□ -1.85
VPS50-212ENST00000476413 NECAP2Q9NVZ3 263 aa3.51□□□□□ -1.85
VPS50-212ENST00000476413 DOCK8Q8NF50 2099 aa3.51□□□□□ -1.85
VPS50-212ENST00000476413 MROH5Q6ZUA9 1318 aa3.5□□□□□ -1.85
VPS50-212ENST00000476413 IGKV6D-21A0A0A0MT36 114 aa3.5□□□□□ -1.85
VPS50-212ENST00000476413 A0A0B4J2E0 115 aa3.5□□□□□ -1.85
VPS50-212ENST00000476413 B4GALT5O43286 388 aa3.5□□□□□ -1.85
VPS50-212ENST00000476413 KDELR3O43731 214 aa3.5□□□□□ -1.85
VPS50-212ENST00000476413 SLC19A2O60779 497 aa3.5□□□□□ -1.85
VPS50-212ENST00000476413 GLSO94925 669 aaPredicted RBP3.5□□□□□ -1.85
VPS50-212ENST00000476413 TGM6O95932 706 aa3.5□□□□□ -1.85
VPS50-212ENST00000476413 MRPL3P09001 348 aaKnown RBP3.5□□□□□ -1.85
VPS50-212ENST00000476413 GFAPP14136 432 aa3.5□□□□□ -1.85
VPS50-212ENST00000476413 GGT2P36268 569 aa3.5□□□□□ -1.85
VPS50-212ENST00000476413 RAB43Q86YS6 212 aa3.5□□□□□ -1.85
VPS50-212ENST00000476413 UBALD2Q8IYN6 164 aa3.5□□□□□ -1.85
VPS50-212ENST00000476413 OR51L1Q8NGJ5 315 aa3.5□□□□□ -1.85
VPS50-212ENST00000476413 TCP10LQ8TDR4 215 aa3.5□□□□□ -1.85
VPS50-212ENST00000476413 C18orf15Q96N68 181 aa3.5□□□□□ -1.85
VPS50-212ENST00000476413 RBBP8Q99708 897 aa3.5□□□□□ -1.85
VPS50-212ENST00000476413 GGTLC1Q9BX51 225 aa3.5□□□□□ -1.85
VPS50-212ENST00000476413 REEP1Q9H902 201 aa3.5□□□□□ -1.85
VPS50-212ENST00000476413 RFNGQ9Y644 331 aa3.5□□□□□ -1.85
VPS50-212ENST00000476413 KPTNQ9Y664 436 aa3.5□□□□□ -1.85
VPS50-212ENST00000476413 TRAV19A0A0A6YYK7 116 aa3.49□□□□□ -1.85
VPS50-212ENST00000476413 IGHV3-72A0A0B4J1Y9 119 aa3.49□□□□□ -1.85
VPS50-212ENST00000476413 BOLA2-SMG1P6H3BVE0 249 aa3.49□□□□□ -1.85
VPS50-212ENST00000476413 MAGEB4O15481 346 aaPredicted RBP3.49□□□□□ -1.85
VPS50-212ENST00000476413 RAD1O60671 282 aa3.49□□□□□ -1.85
VPS50-212ENST00000476413 CCNKO75909 580 aa3.49□□□□□ -1.85
VPS50-212ENST00000476413 WISP3O95389 354 aaPredicted RBP3.49□□□□□ -1.85
VPS50-212ENST00000476413 HLA-DQA1P01909 254 aa3.49□□□□□ -1.85
VPS50-212ENST00000476413 IGKV3-11P04433 115 aa3.49□□□□□ -1.85
VPS50-212ENST00000476413 THRAP10827 490 aa3.49□□□□□ -1.85
VPS50-212ENST00000476413 HTR1DP28221 377 aa3.49□□□□□ -1.85
VPS50-212ENST00000476413 AP1S2P56377 157 aa3.49□□□□□ -1.85
VPS50-212ENST00000476413 TAS2R39P59534 338 aa3.49□□□□□ -1.85
VPS50-212ENST00000476413 CYP24A1Q07973 514 aa3.49□□□□□ -1.85
VPS50-212ENST00000476413 SIGLEC14Q08ET2 396 aa3.49□□□□□ -1.85
VPS50-212ENST00000476413 ABCA11PQ4W5N1 156 aa3.49□□□□□ -1.85
VPS50-212ENST00000476413 C5orf47Q569G3 176 aa3.49□□□□□ -1.85
VPS50-212ENST00000476413 RNASE13Q5GAN3 156 aaKnown RBP3.49□□□□□ -1.85
VPS50-212ENST00000476413 MLIPQ5VWP3 458 aa3.49□□□□□ -1.85
VPS50-212ENST00000476413 SLC35D2Q76EJ3 337 aa3.49□□□□□ -1.85
VPS50-212ENST00000476413 CSGALNACT2Q8N6G5 542 aa3.49□□□□□ -1.85
VPS50-212ENST00000476413 C19orf18Q8NEA5 215 aa3.49□□□□□ -1.85
VPS50-212ENST00000476413 OR4A15Q8NGL6 344 aa3.49□□□□□ -1.85
VPS50-212ENST00000476413 SYNPRQ8TBG9 265 aa3.49□□□□□ -1.85
VPS50-212ENST00000476413 OR8D1Q8WZ84 308 aa3.49□□□□□ -1.85
VPS50-212ENST00000476413 ZNF75CPQ92670 426 aaPredicted RBP3.49□□□□□ -1.85
VPS50-212ENST00000476413 TFGQ92734 400 aaPredicted RBP3.49□□□□□ -1.85
VPS50-212ENST00000476413 KCNS1Q96KK3 526 aa3.49□□□□□ -1.85
VPS50-212ENST00000476413 CHID1Q9BWS9 393 aa3.49□□□□□ -1.85
VPS50-212ENST00000476413 SIRT7Q9NRC8 400 aa3.49□□□□□ -1.85
VPS50-212ENST00000476413 FBXO8Q9NRD0 319 aa3.49□□□□□ -1.85
VPS50-212ENST00000476413 OR51B2Q9Y5P1 312 aa3.49□□□□□ -1.85
VPS50-212ENST00000476413 TUBGCP6Q96RT7 1819 aa3.49□□□□□ -1.85
VPS50-212ENST00000476413 AHDC1Q5TGY3 1603 aaPredicted RBP3.48□□□□□ -1.85
VPS50-212ENST00000476413 LRCOL1A6NCL2 159 aa3.48□□□□□ -1.85
VPS50-212ENST00000476413 NDUFC2-KCTD14E9PQ53 114 aa3.48□□□□□ -1.85
VPS50-212ENST00000476413 TNFRSF11BO00300 401 aa3.48□□□□□ -1.85
VPS50-212ENST00000476413 VAMP5O95183 116 aa3.48□□□□□ -1.85
VPS50-212ENST00000476413 MBP02144 154 aa3.48□□□□□ -1.85
VPS50-212ENST00000476413 MUC1P15941 1255 aaPredicted RBP3.48□□□□□ -1.85
VPS50-212ENST00000476413 MYL9P24844 172 aa3.48□□□□□ -1.85
VPS50-212ENST00000476413 OPRK1P41145 380 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms