RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 CIB2O75838 187 aa17.77■□□□□ 0.44
LIME1-204ENST00000476183 PNPP00491 289 aa17.77■□□□□ 0.44
LIME1-204ENST00000476183 MDH2P40926 338 aaKnown RBP17.77■□□□□ 0.44
LIME1-204ENST00000476183 HCCSP53701 268 aa17.77■□□□□ 0.44
LIME1-204ENST00000476183 SEC61A1P61619 476 aaKnown RBP17.77■□□□□ 0.44
LIME1-204ENST00000476183 LCN2P80188 198 aa17.77■□□□□ 0.44
LIME1-204ENST00000476183 SRSF2Q01130 221 aaKnown RBP17.77■□□□□ 0.44
LIME1-204ENST00000476183 OR8G1Q15617 311 aa17.77■□□□□ 0.44
LIME1-204ENST00000476183 ZNF181Q2M3W8 571 aa17.77■□□□□ 0.44
LIME1-204ENST00000476183 FAM201AQ5SY85 155 aa17.77■□□□□ 0.44
LIME1-204ENST00000476183 FAM57BQ71RH2 274 aa17.77■□□□□ 0.44
LIME1-204ENST00000476183 SLC16A9Q7RTY1 509 aa17.77■□□□□ 0.44
LIME1-204ENST00000476183 ZDHHC13Q8IUH4 622 aa17.77■□□□□ 0.44
LIME1-204ENST00000476183 CELF2-AS1Q8N7Q2 184 aa17.77■□□□□ 0.44
LIME1-204ENST00000476183 ZNF454Q8N9F8 522 aa17.77■□□□□ 0.44
LIME1-204ENST00000476183 ADAT1Q9BUB4 502 aaKnown RBP17.77■□□□□ 0.44
LIME1-204ENST00000476183 SEMA6AQ9H2E6 1030 aa17.77■□□□□ 0.44
LIME1-204ENST00000476183 PATZ1Q9HBE1 687 aaKnown RBP17.77■□□□□ 0.44
LIME1-204ENST00000476183 MRPL15Q9P015 296 aaKnown RBP17.77■□□□□ 0.44
LIME1-204ENST00000476183 PCDHB10Q9UN67 800 aa17.77■□□□□ 0.44
LIME1-204ENST00000476183 ZAR1LA6NP61 321 aa17.76■□□□□ 0.43
LIME1-204ENST00000476183 F5H0A9 414 aaPredicted RBP17.76■□□□□ 0.43
LIME1-204ENST00000476183 H2BFMP0C1H6 154 aa17.76■□□□□ 0.43
LIME1-204ENST00000476183 FCGR1AP12314 374 aa17.76■□□□□ 0.43
LIME1-204ENST00000476183 EFNB1P98172 346 aa17.76■□□□□ 0.43
LIME1-204ENST00000476183 FAM3AP98173 230 aa17.76■□□□□ 0.43
LIME1-204ENST00000476183 MPPED2Q15777 294 aa17.76■□□□□ 0.43
LIME1-204ENST00000476183 SLX4IPQ5VYV7 408 aa17.76■□□□□ 0.43
LIME1-204ENST00000476183 BCDIN3DQ7Z5W3 292 aaKnown RBP17.76■□□□□ 0.43
LIME1-204ENST00000476183 KLHL36Q8N4N3 616 aa17.76■□□□□ 0.43
LIME1-204ENST00000476183 Q8TCH9 128 aa17.76■□□□□ 0.43
LIME1-204ENST00000476183 REEP6Q96HR9 211 aa17.76■□□□□ 0.43
LIME1-204ENST00000476183 TEAD3Q99594 435 aa17.76■□□□□ 0.43
LIME1-204ENST00000476183 TMPRSS13Q9BYE2 586 aa17.76■□□□□ 0.43
LIME1-204ENST00000476183 SLC22A4Q9H015 551 aa17.76■□□□□ 0.43
LIME1-204ENST00000476183 OPA3Q9H6K4 179 aa17.76■□□□□ 0.43
LIME1-204ENST00000476183 TMEM165Q9HC07 324 aa17.76■□□□□ 0.43
LIME1-204ENST00000476183 BRD7Q9NPI1 651 aa17.76■□□□□ 0.43
LIME1-204ENST00000476183 UFSP2Q9NUQ7 469 aa17.76■□□□□ 0.43
LIME1-204ENST00000476183 CEACAM18A8MTB9 384 aa17.75■□□□□ 0.43
LIME1-204ENST00000476183 GMDSO60547 372 aa17.75■□□□□ 0.43
LIME1-204ENST00000476183 APOC1P02654 83 aa17.75■□□□□ 0.43
LIME1-204ENST00000476183 MRPL3P09001 348 aaKnown RBP17.75■□□□□ 0.43
LIME1-204ENST00000476183 ALOX5APP20292 161 aa17.75■□□□□ 0.43
LIME1-204ENST00000476183 HOXA4Q00056 320 aaPredicted RBP17.75■□□□□ 0.43
LIME1-204ENST00000476183 TIGD6Q17RP2 521 aa17.75■□□□□ 0.43
LIME1-204ENST00000476183 C12orf73Q69YU5 71 aa17.75■□□□□ 0.43
LIME1-204ENST00000476183 LRRN1Q6UXK5 716 aa17.75■□□□□ 0.43
LIME1-204ENST00000476183 PYDC1Q8WXC3 89 aa17.75■□□□□ 0.43
LIME1-204ENST00000476183 CENPNQ96H22 339 aaPredicted RBP17.75■□□□□ 0.43
LIME1-204ENST00000476183 OAZ3Q9UMX2 235 aa17.75■□□□□ 0.43
LIME1-204ENST00000476183 LOC105371242A0A075B767 164 aa17.74■□□□□ 0.43
LIME1-204ENST00000476183 A0A0G2JMP0 313 aa17.74■□□□□ 0.43
LIME1-204ENST00000476183 A0A0X1KG70 313 aa17.74■□□□□ 0.43
LIME1-204ENST00000476183 hCG_38984A0A1B0GV85 526 aa17.74■□□□□ 0.43
LIME1-204ENST00000476183 RNF212BA8MTL3 300 aa17.74■□□□□ 0.43
LIME1-204ENST00000476183 PRR32B1ATL7 298 aa17.74■□□□□ 0.43
LIME1-204ENST00000476183 FAM20BO75063 409 aa17.74■□□□□ 0.43
LIME1-204ENST00000476183 PTBP3O95758 552 aaKnown RBP17.74■□□□□ 0.43
LIME1-204ENST00000476183 DCAF12L2Q5VW00 463 aa17.74■□□□□ 0.43
LIME1-204ENST00000476183 CCDC121Q6ZUS5 278 aa17.74■□□□□ 0.43
LIME1-204ENST00000476183 MUC20Q8N307 709 aaPredicted RBP17.74■□□□□ 0.43
LIME1-204ENST00000476183 TCEANCQ8N8B7 351 aa17.74■□□□□ 0.43
LIME1-204ENST00000476183 OR4M2Q8NGB6 313 aa17.74■□□□□ 0.43
LIME1-204ENST00000476183 OR52H1Q8NGJ2 320 aa17.74■□□□□ 0.43
LIME1-204ENST00000476183 ERGIC1Q969X5 290 aa17.74■□□□□ 0.43
LIME1-204ENST00000476183 CIB1Q99828 191 aa17.74■□□□□ 0.43
LIME1-204ENST00000476183 YIPF3Q9GZM5 350 aa17.74■□□□□ 0.43
LIME1-204ENST00000476183 OR10A2Q9H208 303 aa17.74■□□□□ 0.43
LIME1-204ENST00000476183 METTL17Q9H7H0 456 aaPredicted RBP17.74■□□□□ 0.43
LIME1-204ENST00000476183 SP140LQ9H930 580 aa17.74■□□□□ 0.43
LIME1-204ENST00000476183 MMP26Q9NRE1 261 aa17.74■□□□□ 0.43
LIME1-204ENST00000476183 LAMP5Q9UJQ1 280 aa17.74■□□□□ 0.43
LIME1-204ENST00000476183 LRRC30A6NM36 301 aa17.73■□□□□ 0.43
LIME1-204ENST00000476183 FOXH1O75593 365 aa17.73■□□□□ 0.43
LIME1-204ENST00000476183 POLR2IP36954 125 aaKnown RBP17.73■□□□□ 0.43
LIME1-204ENST00000476183 ACTR3P61158 418 aa17.73■□□□□ 0.43
LIME1-204ENST00000476183 GFOD2Q3B7J2 385 aa17.73■□□□□ 0.43
LIME1-204ENST00000476183 AADACL4Q5VUY2 407 aa17.73■□□□□ 0.43
LIME1-204ENST00000476183 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.73■□□□□ 0.43
LIME1-204ENST00000476183 C19orf18Q8NEA5 215 aa17.73■□□□□ 0.43
LIME1-204ENST00000476183 PGAM5Q96HS1 289 aa17.73■□□□□ 0.43
LIME1-204ENST00000476183 TMEM246Q9BRR3 403 aa17.73■□□□□ 0.43
LIME1-204ENST00000476183 PPP1R3EQ9H7J1 279 aa17.73■□□□□ 0.43
LIME1-204ENST00000476183 OPN4Q9UHM6 478 aa17.73■□□□□ 0.43
LIME1-204ENST00000476183 COPS3Q9UNS2 423 aa17.73■□□□□ 0.43
LIME1-204ENST00000476183 NOP16Q9Y3C1 178 aaKnown RBP17.73■□□□□ 0.43
LIME1-204ENST00000476183 LRP12Q9Y561 859 aa17.73■□□□□ 0.43
LIME1-204ENST00000476183 DOCK11Q5JSL3 2073 aa17.72■□□□□ 0.43
LIME1-204ENST00000476183 PPIAL4EA0A075B759 164 aa17.72■□□□□ 0.43
LIME1-204ENST00000476183 SAC3D1A6NKF1 404 aa17.72■□□□□ 0.43
LIME1-204ENST00000476183 PPIAL4DF5H284 164 aa17.72■□□□□ 0.43
LIME1-204ENST00000476183 TRAPPC2LH3BP13 241 aa17.72■□□□□ 0.43
LIME1-204ENST00000476183 FSTL3O95633 263 aa17.72■□□□□ 0.43
LIME1-204ENST00000476183 WNT2P09544 360 aa17.72■□□□□ 0.43
LIME1-204ENST00000476183 PPIAL4FP0DN26 164 aa17.72■□□□□ 0.43
LIME1-204ENST00000476183 DDOSTP39656 456 aa17.72■□□□□ 0.43
LIME1-204ENST00000476183 GSK3AP49840 483 aa17.72■□□□□ 0.43
LIME1-204ENST00000476183 PSMA6P60900 246 aaKnown RBP17.72■□□□□ 0.43
LIME1-204ENST00000476183 KPNB1Q14974 876 aaKnown RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms