RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 LDB3O75112 727 aa10.47□□□□□ -0.73
U2AF1-209ENST00000475639 TTRP02766 147 aa10.47□□□□□ -0.73
U2AF1-209ENST00000475639 SLC6A11P48066 632 aa10.47□□□□□ -0.73
U2AF1-209ENST00000475639 H2BFSP57053 126 aa10.47□□□□□ -0.73
U2AF1-209ENST00000475639 SLC35A1P78382 337 aa10.47□□□□□ -0.73
U2AF1-209ENST00000475639 FAM109BQ6ICB4 259 aaPredicted RBP10.47□□□□□ -0.73
U2AF1-209ENST00000475639 LCN15Q6UWW0 184 aa10.47□□□□□ -0.73
U2AF1-209ENST00000475639 ZNF813Q6ZN06 617 aa10.47□□□□□ -0.73
U2AF1-209ENST00000475639 C12orf76Q8N812 135 aaPredicted RBP10.47□□□□□ -0.73
U2AF1-209ENST00000475639 OR4D9Q8NGE8 314 aa10.47□□□□□ -0.73
U2AF1-209ENST00000475639 OR6K3Q8NGY3 331 aa10.47□□□□□ -0.73
U2AF1-209ENST00000475639 OR51H1Q8NH63 302 aa10.47□□□□□ -0.73
U2AF1-209ENST00000475639 ZNF775Q96BV0 537 aaPredicted RBP10.47□□□□□ -0.73
U2AF1-209ENST00000475639 TIMD4Q96H15 378 aa10.47□□□□□ -0.73
U2AF1-209ENST00000475639 PCED1AQ9H1Q7 454 aa10.47□□□□□ -0.73
U2AF1-209ENST00000475639 PDFQ9HBH1 243 aa10.47□□□□□ -0.73
U2AF1-209ENST00000475639 RASL12Q9NYN1 266 aa10.47□□□□□ -0.73
U2AF1-209ENST00000475639 PRAMEF26H0Y7S4 382 aa10.47□□□□□ -0.73
U2AF1-209ENST00000475639 FPR3P25089 353 aa10.47□□□□□ -0.73
U2AF1-209ENST00000475639 CLEC9AQ6UXN8 241 aa10.47□□□□□ -0.73
U2AF1-209ENST00000475639 OR10P1Q8NGE3 313 aa10.47□□□□□ -0.73
U2AF1-209ENST00000475639 NEIL2Q969S2 332 aa10.47□□□□□ -0.73
U2AF1-209ENST00000475639 ACTR3CQ9C0K3 210 aaPredicted RBP10.47□□□□□ -0.73
U2AF1-209ENST00000475639 WWTR1Q9GZV5 400 aa10.47□□□□□ -0.73
U2AF1-209ENST00000475639 SEBOXQ9HB31 216 aaPredicted RBP10.47□□□□□ -0.73
U2AF1-209ENST00000475639 KCNG2Q9UJ96 466 aa10.47□□□□□ -0.73
U2AF1-209ENST00000475639 CACNA1GO43497 2377 aa10.47□□□□□ -0.73
U2AF1-209ENST00000475639 GREB1Q4ZG55 1949 aa10.47□□□□□ -0.73
U2AF1-209ENST00000475639 TEX50A0A1B0GTY4 177 aa10.47□□□□□ -0.73
U2AF1-209ENST00000475639 OR52A4PA6NMU1 304 aa10.47□□□□□ -0.73
U2AF1-209ENST00000475639 PTGESO14684 152 aa10.47□□□□□ -0.73
U2AF1-209ENST00000475639 APEHP13798 732 aaKnown RBP10.47□□□□□ -0.73
U2AF1-209ENST00000475639 EN2P19622 333 aaPredicted RBP10.47□□□□□ -0.73
U2AF1-209ENST00000475639 CLDN17P56750 224 aa10.47□□□□□ -0.73
U2AF1-209ENST00000475639 KRTDAPP60985 99 aa10.47□□□□□ -0.73
U2AF1-209ENST00000475639 MISPQ8IVT2 679 aa10.47□□□□□ -0.73
U2AF1-209ENST00000475639 LRRC18Q8N456 261 aa10.47□□□□□ -0.73
U2AF1-209ENST00000475639 CHST14Q8NCH0 376 aa10.47□□□□□ -0.73
U2AF1-209ENST00000475639 ABHD4Q8TB40 342 aa10.47□□□□□ -0.73
U2AF1-209ENST00000475639 FAM3DQ96BQ1 224 aa10.47□□□□□ -0.73
U2AF1-209ENST00000475639 RBM14Q96PK6 669 aaKnown RBP10.47□□□□□ -0.73
U2AF1-209ENST00000475639 SMIM7Q9BQ49 75 aa10.47□□□□□ -0.73
U2AF1-209ENST00000475639 DECR2Q9NUI1 292 aa10.47□□□□□ -0.73
U2AF1-209ENST00000475639 AK3Q9UIJ7 227 aa10.47□□□□□ -0.73
U2AF1-209ENST00000475639 HELZP42694 1942 aaKnown RBP10.47□□□□□ -0.73
U2AF1-209ENST00000475639 E5RGE8 158 aa10.46□□□□□ -0.73
U2AF1-209ENST00000475639 OR2F2O95006 317 aa10.46□□□□□ -0.73
U2AF1-209ENST00000475639 MMP11P24347 488 aa10.46□□□□□ -0.73
U2AF1-209ENST00000475639 OR2F1Q13607 317 aa10.46□□□□□ -0.73
U2AF1-209ENST00000475639 CCL14Q16627 93 aa10.46□□□□□ -0.73
U2AF1-209ENST00000475639 VWA1Q6PCB0 445 aa10.46□□□□□ -0.73
U2AF1-209ENST00000475639 GPR32P1Q8NGA4 272 aa10.46□□□□□ -0.73
U2AF1-209ENST00000475639 OR13D1Q8NGV5 346 aa10.46□□□□□ -0.73
U2AF1-209ENST00000475639 BLNKQ8WV28 456 aa10.46□□□□□ -0.73
U2AF1-209ENST00000475639 TSLPQ969D9 159 aa10.46□□□□□ -0.73
U2AF1-209ENST00000475639 RPUSD4Q96CM3 377 aaKnown RBP10.46□□□□□ -0.73
U2AF1-209ENST00000475639 RASD2Q96D21 266 aa10.46□□□□□ -0.73
U2AF1-209ENST00000475639 MYEOVQ96EZ4 313 aa10.46□□□□□ -0.73
U2AF1-209ENST00000475639 WDR76Q9H967 626 aa10.46□□□□□ -0.73
U2AF1-209ENST00000475639 ISG20L2Q9H9L3 353 aaKnown RBP10.46□□□□□ -0.73
U2AF1-209ENST00000475639 MRPL22Q9NWU5 206 aaKnown RBP10.46□□□□□ -0.73
U2AF1-209ENST00000475639 STRAPQ9Y3F4 350 aaKnown RBP10.46□□□□□ -0.73
U2AF1-209ENST00000475639 TRBV11-1A0A0K0K1C0 115 aa10.46□□□□□ -0.73
U2AF1-209ENST00000475639 TMEM218A2RU14 115 aa10.46□□□□□ -0.73
U2AF1-209ENST00000475639 TCN2P20062 427 aa10.46□□□□□ -0.73
U2AF1-209ENST00000475639 NPY4RP50391 375 aa10.46□□□□□ -0.73
U2AF1-209ENST00000475639 RAE1P78406 368 aaKnown RBP10.46□□□□□ -0.73
U2AF1-209ENST00000475639 C2orf68Q2NKX9 166 aa10.46□□□□□ -0.73
U2AF1-209ENST00000475639 Q6ZSR6 202 aa10.46□□□□□ -0.73
U2AF1-209ENST00000475639 FA2HQ7L5A8 372 aa10.46□□□□□ -0.73
U2AF1-209ENST00000475639 TMEM123Q8N131 208 aa10.46□□□□□ -0.73
U2AF1-209ENST00000475639 LMNTD1Q8N9Z9 388 aa10.46□□□□□ -0.73
U2AF1-209ENST00000475639 OR4D11Q8NGI4 311 aa10.46□□□□□ -0.73
U2AF1-209ENST00000475639 OR5M1Q8NGP8 315 aa10.46□□□□□ -0.73
U2AF1-209ENST00000475639 FAM103A1Q9BTL3 118 aaKnown RBP10.46□□□□□ -0.73
U2AF1-209ENST00000475639 FBXO34Q9NWN3 711 aa10.46□□□□□ -0.73
U2AF1-209ENST00000475639 ZNF106Q9H2Y7 1883 aaKnown RBP10.46□□□□□ -0.73
U2AF1-209ENST00000475639 IGLV3-10A0A075B6K4 115 aa10.46□□□□□ -0.74
U2AF1-209ENST00000475639 PAPLNO95428 1278 aa10.46□□□□□ -0.74
U2AF1-209ENST00000475639 F12P00748 615 aaPredicted RBP10.46□□□□□ -0.74
U2AF1-209ENST00000475639 RD3LP0DJH9 198 aa10.46□□□□□ -0.74
U2AF1-209ENST00000475639 CD37P11049 281 aa10.46□□□□□ -0.74
U2AF1-209ENST00000475639 CPMP14384 443 aa10.46□□□□□ -0.74
U2AF1-209ENST00000475639 ACHEP22303 614 aa10.46□□□□□ -0.74
U2AF1-209ENST00000475639 GALP22466 123 aa10.46□□□□□ -0.74
U2AF1-209ENST00000475639 OR5I1Q13606 314 aa10.46□□□□□ -0.74
U2AF1-209ENST00000475639 EXOSC7Q15024 291 aaKnown RBP10.46□□□□□ -0.74
U2AF1-209ENST00000475639 SYPL1Q16563 259 aa10.46□□□□□ -0.74
U2AF1-209ENST00000475639 GLYATL3Q5SZD4 288 aa10.46□□□□□ -0.74
U2AF1-209ENST00000475639 ADGRE4PQ86SQ3 457 aa10.46□□□□□ -0.74
U2AF1-209ENST00000475639 ZNF561Q8N587 486 aa10.46□□□□□ -0.74
U2AF1-209ENST00000475639 OR4F5Q8NH21 305 aa10.46□□□□□ -0.74
U2AF1-209ENST00000475639 EID2BQ96D98 161 aa10.46□□□□□ -0.74
U2AF1-209ENST00000475639 OR4F4Q96R69 305 aa10.46□□□□□ -0.74
U2AF1-209ENST00000475639 COMMD5Q9GZQ3 224 aa10.46□□□□□ -0.74
U2AF1-209ENST00000475639 P4HTMQ9NXG6 502 aa10.46□□□□□ -0.74
U2AF1-209ENST00000475639 RNF24Q9Y225 148 aa10.46□□□□□ -0.74
U2AF1-209ENST00000475639 CHD5Q8TDI0 1954 aa10.46□□□□□ -0.74
U2AF1-209ENST00000475639 A0A1W2PPQ1 181 aa10.46□□□□□ -0.74
U2AF1-209ENST00000475639 C5orf52A6NGY3 159 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms