RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 TNFP01375 233 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 TFPIP10646 304 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 GGT1P19440 569 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 FGF7P21781 194 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 ARRB2P32121 409 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 TNFSF8P32971 234 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 SELENOPP49908 381 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 DEFA1P59665 94 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 DEFA3P59666 94 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 PSG5Q15238 335 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 PARGQ86W56 976 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 FBXO36Q8NEA4 188 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 OR52L2PQ8NGH6 319 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 CYB5D2Q8WUJ1 264 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 ISL2Q96A47 359 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 RDH12Q96NR8 316 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 EXOSC4Q9NPD3 245 aaKnown RBP4.31□□□□□ -1.72
NPHP3-206ENST00000474871 CACFD1Q9UGQ2 172 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 HHLA2Q9UM44 414 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 HS3ST4Q9Y661 456 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 ZNF217O75362 1048 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 RCBTB2O95199 551 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 FADS2O95864 444 aaKnown RBP4.31□□□□□ -1.72
NPHP3-206ENST00000474871 FURINP09958 794 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 IGFBP2P18065 325 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 SSR2P43308 183 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 NUDT2P50583 147 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 MFAP4P55083 255 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 WNT3P56703 355 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 NTHL1P78549 312 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 HMGCS1Q01581 520 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 UPP1Q16831 310 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 C3orf36Q3SXR2 165 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 MSS51Q4VC12 460 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 STEAP4Q687X5 459 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 TRIM40Q6P9F5 258 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 TMEM217Q8N7C4 229 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 THAP6Q8TBB0 222 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 ADAMTS17Q8TE56 1095 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 ASB13Q8WXK3 278 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 IGSF8Q969P0 613 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 KCTD12Q96CX2 325 aaKnown RBP4.31□□□□□ -1.72
NPHP3-206ENST00000474871 UHRF2Q96PU4 802 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 APOL4Q9BPW4 351 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 SCNM1Q9BWG6 230 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 NXF5Q9H1B4 397 aaKnown RBP4.31□□□□□ -1.72
NPHP3-206ENST00000474871 H0Y980 276 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 TRAPPC2LH3BP13 241 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 SDHDO14521 159 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 CLEC3AO75596 197 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 S1PR2O95136 353 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 CLDN7O95471 211 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 PSG1P11464 419 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 TSFMP43897 325 aaKnown RBP4.31□□□□□ -1.72
NPHP3-206ENST00000474871 TAS2R41P59536 307 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 RPL8P62917 257 aaKnown RBP4.31□□□□□ -1.72
NPHP3-206ENST00000474871 SLC25A11Q02978 314 aaKnown RBP4.31□□□□□ -1.72
NPHP3-206ENST00000474871 TCTN1Q2MV58 587 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 CD276Q5ZPR3 534 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 B3GLCTQ6Y288 498 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 DEFB107AQ8IZN7 70 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 SPICQ8N5J4 248 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 OR4F6Q8NGB9 312 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 FAM110DQ8TAY7 271 aaPredicted RBP4.31□□□□□ -1.72
NPHP3-206ENST00000474871 GPR82Q96P67 336 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 NKX3-1Q99801 234 aaPredicted RBP4.31□□□□□ -1.72
NPHP3-206ENST00000474871 SLC25A19Q9HC21 320 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 AMBNQ9NP70 447 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 USE1Q9NZ43 259 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 FBLN5Q9UBX5 448 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 FBXO4Q9UKT5 387 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 SCN10AQ9Y5Y9 1956 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 TRBV4-1A0A0J9YWV2 114 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 A0A1B0GU03 582 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 ASPDHA6ND91 283 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 OR6C6A6NF89 314 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 OR5B21A6NL26 309 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 ETV2O00321 342 aaPredicted RBP4.31□□□□□ -1.72
NPHP3-206ENST00000474871 RAB29O14966 203 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 DLX3O60479 287 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 CTSDP07339 412 aaPredicted RBP4.31□□□□□ -1.72
NPHP3-206ENST00000474871 ADRA2AP08913 450 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 CD33P20138 364 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 SLC6A4P31645 630 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 YPEL3P61236 119 aaPredicted RBP4.31□□□□□ -1.72
NPHP3-206ENST00000474871 ZXDBP98169 803 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 OC90Q02509 493 aaPredicted RBP4.31□□□□□ -1.72
NPHP3-206ENST00000474871 SLC25A52Q3SY17 297 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 C6orf136Q5SQH8 315 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 TRMT10BQ6PF06 316 aaKnown RBP4.31□□□□□ -1.72
NPHP3-206ENST00000474871 LAPTM4BQ86VI4 370 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 CALHM3Q86XJ0 350 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 FAM126BQ8IXS8 530 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 KLHDC8BQ8IXV7 354 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 EID2Q8N6I1 236 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 OR4F5Q8NH21 305 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 JOSD2Q8TAC2 188 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 ABHD5Q8WTS1 349 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 ZNF480Q8WV37 535 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 SMARCD2Q92925 531 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms