RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 PAQR5Q9NXK6 330 aaPredicted RBP8.61□□□□□ -1.03
USP39-214ENST00000474572 ZNF224Q9NZL3 707 aa8.61□□□□□ -1.03
USP39-214ENST00000474572 GHRLQ9UBU3 117 aa8.61□□□□□ -1.03
USP39-214ENST00000474572 B4GALT7Q9UBV7 327 aa8.61□□□□□ -1.03
USP39-214ENST00000474572 IL17BQ9UHF5 180 aa8.61□□□□□ -1.03
USP39-214ENST00000474572 OR6C6A6NF89 314 aa8.6□□□□□ -1.03
USP39-214ENST00000474572 CDRT15L2A8MXV6 281 aa8.6□□□□□ -1.03
USP39-214ENST00000474572 RPL36A-HNRNPH2H7BZ11 118 aa8.6□□□□□ -1.03
USP39-214ENST00000474572 TNFRSF10AO00220 468 aa8.6□□□□□ -1.03
USP39-214ENST00000474572 NME2P1O60361 137 aa8.6□□□□□ -1.03
USP39-214ENST00000474572 TRAPPC6AO75865 159 aa8.6□□□□□ -1.03
USP39-214ENST00000474572 ITGB2P05107 769 aa8.6□□□□□ -1.03
USP39-214ENST00000474572 ZNF735P0CB33 412 aa8.6□□□□□ -1.03
USP39-214ENST00000474572 NAT2P11245 290 aa8.6□□□□□ -1.03
USP39-214ENST00000474572 GTF2F2P13984 249 aa8.6□□□□□ -1.03
USP39-214ENST00000474572 ZNF708P17019 499 aa8.6□□□□□ -1.03
USP39-214ENST00000474572 CXCL3P19876 107 aa8.6□□□□□ -1.03
USP39-214ENST00000474572 NME2P22392 152 aa8.6□□□□□ -1.03
USP39-214ENST00000474572 RCVRNP35243 200 aa8.6□□□□□ -1.03
USP39-214ENST00000474572 RAD52P43351 418 aa8.6□□□□□ -1.03
USP39-214ENST00000474572 SCRN3Q0VDG4 424 aa8.6□□□□□ -1.03
USP39-214ENST00000474572 OR1C1Q15619 314 aa8.6□□□□□ -1.03
USP39-214ENST00000474572 TRIP6Q15654 476 aaKnown RBP8.6□□□□□ -1.03
USP39-214ENST00000474572 NDUFA5Q16718 116 aa8.6□□□□□ -1.03
USP39-214ENST00000474572 LAMTOR1Q6IAA8 161 aa8.6□□□□□ -1.03
USP39-214ENST00000474572 OR10K2Q6IF99 312 aa8.6□□□□□ -1.03
USP39-214ENST00000474572 Q6ZTK2 550 aa8.6□□□□□ -1.03
USP39-214ENST00000474572 NAA40Q86UY6 237 aa8.6□□□□□ -1.03
USP39-214ENST00000474572 SULF2Q8IWU5 870 aa8.6□□□□□ -1.03
USP39-214ENST00000474572 SPICQ8N5J4 248 aa8.6□□□□□ -1.03
USP39-214ENST00000474572 ASCC1Q8N9N2 400 aaKnown RBP8.6□□□□□ -1.03
USP39-214ENST00000474572 OR4D10Q8NGI6 311 aa8.6□□□□□ -1.03
USP39-214ENST00000474572 PP6455Q8WZ26 134 aa8.6□□□□□ -1.03
USP39-214ENST00000474572 SPTSSAQ969W0 71 aa8.6□□□□□ -1.03
USP39-214ENST00000474572 ZNF845Q96IR2 970 aaPredicted RBP8.6□□□□□ -1.03
USP39-214ENST00000474572 FOXB1Q99853 325 aa8.6□□□□□ -1.03
USP39-214ENST00000474572 TMEM246Q9BRR3 403 aa8.6□□□□□ -1.03
USP39-214ENST00000474572 GON7Q9BXV9 100 aa8.6□□□□□ -1.03
USP39-214ENST00000474572 HES7Q9BYE0 225 aa8.6□□□□□ -1.03
USP39-214ENST00000474572 TTTY12Q9BZ98 90 aa8.6□□□□□ -1.03
USP39-214ENST00000474572 CHST5Q9GZS9 411 aa8.6□□□□□ -1.03
USP39-214ENST00000474572 ALX4Q9H161 411 aaPredicted RBP8.6□□□□□ -1.03
USP39-214ENST00000474572 OR10A4Q9H209 315 aa8.6□□□□□ -1.03
USP39-214ENST00000474572 RANBP3Q9H6Z4 567 aaPredicted RBP8.6□□□□□ -1.03
USP39-214ENST00000474572 GPR35Q9HC97 309 aa8.6□□□□□ -1.03
USP39-214ENST00000474572 PARD6AQ9NPB6 346 aa8.6□□□□□ -1.03
USP39-214ENST00000474572 SLC2A8Q9NY64 477 aa8.6□□□□□ -1.03
USP39-214ENST00000474572 PLEK2Q9NYT0 353 aa8.6□□□□□ -1.03
USP39-214ENST00000474572 ATPIF1Q9UII2 106 aa8.6□□□□□ -1.03
USP39-214ENST00000474572 KLK13Q9UKR3 277 aa8.6□□□□□ -1.03
USP39-214ENST00000474572 MED12Q93074 2177 aa8.59□□□□□ -1.03
USP39-214ENST00000474572 FOXI3A8MTJ6 420 aaPredicted RBP8.59□□□□□ -1.03
USP39-214ENST00000474572 G3V3Q6 166 aa8.59□□□□□ -1.03
USP39-214ENST00000474572 PYCARD-AS1I3L0S3 204 aa8.59□□□□□ -1.03
USP39-214ENST00000474572 FABP7O15540 132 aa8.59□□□□□ -1.03
USP39-214ENST00000474572 SGCEO43556 437 aa8.59□□□□□ -1.03
USP39-214ENST00000474572 MTRF1O75570 445 aaKnown RBP8.59□□□□□ -1.03
USP39-214ENST00000474572 CD3DP04234 171 aa8.59□□□□□ -1.03
USP39-214ENST00000474572 SP1P08047 785 aa8.59□□□□□ -1.03
USP39-214ENST00000474572 CHRM2P08172 466 aa8.59□□□□□ -1.03
USP39-214ENST00000474572 MMP7P09237 267 aaPredicted RBP8.59□□□□□ -1.03
USP39-214ENST00000474572 GSTT2P0CG29 244 aa8.59□□□□□ -1.03
USP39-214ENST00000474572 VSIG10L2P0DP72 767 aa8.59□□□□□ -1.03
USP39-214ENST00000474572 ITGA3P26006 1051 aa8.59□□□□□ -1.03
USP39-214ENST00000474572 GALK2Q01415 458 aa8.59□□□□□ -1.03
USP39-214ENST00000474572 ZMYND11Q15326 602 aa8.59□□□□□ -1.03
USP39-214ENST00000474572 FAM189A2Q15884 450 aa8.59□□□□□ -1.03
USP39-214ENST00000474572 CEACAM16Q2WEN9 425 aa8.59□□□□□ -1.03
USP39-214ENST00000474572 AWAT2Q6E213 333 aa8.59□□□□□ -1.03
USP39-214ENST00000474572 IGF2-ASQ6U949 168 aa8.59□□□□□ -1.03
USP39-214ENST00000474572 ZNF782Q6ZMW2 699 aaPredicted RBP8.59□□□□□ -1.03
USP39-214ENST00000474572 ZNF627Q7L945 461 aa8.59□□□□□ -1.03
USP39-214ENST00000474572 SLC16A14Q7RTX9 510 aa8.59□□□□□ -1.03
USP39-214ENST00000474572 RNF144BQ7Z419 303 aa8.59□□□□□ -1.03
USP39-214ENST00000474572 ANGPTL5Q86XS5 388 aa8.59□□□□□ -1.03
USP39-214ENST00000474572 GALNT16Q8N428 558 aa8.59□□□□□ -1.03
USP39-214ENST00000474572 LRRC18Q8N456 261 aa8.59□□□□□ -1.03
USP39-214ENST00000474572 C9orf62Q8N4C0 152 aa8.59□□□□□ -1.03
USP39-214ENST00000474572 TMEM251Q8N6I4 163 aa8.59□□□□□ -1.03
USP39-214ENST00000474572 ZFP62Q8NB50 900 aaPredicted RBP8.59□□□□□ -1.03
USP39-214ENST00000474572 BEST4Q8NFU0 473 aa8.59□□□□□ -1.03
USP39-214ENST00000474572 OR52H1Q8NGJ2 320 aa8.59□□□□□ -1.03
USP39-214ENST00000474572 ALKBH3Q96Q83 286 aaPredicted RBP8.59□□□□□ -1.03
USP39-214ENST00000474572 OR10A2Q9H208 303 aa8.59□□□□□ -1.03
USP39-214ENST00000474572 CRLF2Q9HC73 371 aa8.59□□□□□ -1.03
USP39-214ENST00000474572 GPN1Q9HCN4 374 aaPredicted RBP8.59□□□□□ -1.03
USP39-214ENST00000474572 ACKR4Q9NPB9 350 aa8.59□□□□□ -1.03
USP39-214ENST00000474572 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.59□□□□□ -1.03
USP39-214ENST00000474572 DLL4Q9NR61 685 aa8.59□□□□□ -1.03
USP39-214ENST00000474572 NKIRAS2Q9NYR9 191 aa8.59□□□□□ -1.03
USP39-214ENST00000474572 ZNF391Q9UJN7 358 aa8.59□□□□□ -1.03
USP39-214ENST00000474572 SCP2D1Q9UJQ7 156 aa8.59□□□□□ -1.03
USP39-214ENST00000474572 MRPS28Q9Y2Q9 187 aaKnown RBP8.59□□□□□ -1.03
USP39-214ENST00000474572 KLF13Q9Y2Y9 288 aaPredicted RBP8.59□□□□□ -1.03
USP39-214ENST00000474572 BOLA1Q9Y3E2 137 aa8.59□□□□□ -1.03
USP39-214ENST00000474572 A0A0A6YYD4 124 aa8.58□□□□□ -1.04
USP39-214ENST00000474572 MEIS3P1A6NDR6 274 aa8.58□□□□□ -1.04
USP39-214ENST00000474572 TMEM235A6NFC5 223 aa8.58□□□□□ -1.04
USP39-214ENST00000474572 OR6C65A6NJZ3 312 aa8.58□□□□□ -1.04
USP39-214ENST00000474572 ZNF724A8MTY0 619 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms