RNA–Protein interactions for RNA: ENST00000474568.5

ITGB1-210, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-210ENST00000474568 FAM201AQ5SY85 155 aa13.48□□□□□ -0.25
ITGB1-210ENST00000474568 C12orf73Q69YU5 71 aa13.48□□□□□ -0.25
ITGB1-210ENST00000474568 SLC16A9Q7RTY1 509 aa13.48□□□□□ -0.25
ITGB1-210ENST00000474568 ZNF454Q8N9F8 522 aa13.48□□□□□ -0.25
ITGB1-210ENST00000474568 SGK3Q96BR1 496 aa13.48□□□□□ -0.25
ITGB1-210ENST00000474568 REEP6Q96HR9 211 aa13.48□□□□□ -0.25
ITGB1-210ENST00000474568 SIGLEC11Q96RL6 698 aa13.48□□□□□ -0.25
ITGB1-210ENST00000474568 TEAD3Q99594 435 aa13.48□□□□□ -0.25
ITGB1-210ENST00000474568 ZNF319Q9P2F9 582 aa13.48□□□□□ -0.25
ITGB1-210ENST00000474568 PCDHB10Q9UN67 800 aa13.48□□□□□ -0.25
ITGB1-210ENST00000474568 H3BNX3 289 aa13.47□□□□□ -0.25
ITGB1-210ENST00000474568 IFNA2P01563 188 aa13.47□□□□□ -0.25
ITGB1-210ENST00000474568 LCN2P80188 198 aa13.47□□□□□ -0.25
ITGB1-210ENST00000474568 HOXA4Q00056 320 aaPredicted RBP13.47□□□□□ -0.25
ITGB1-210ENST00000474568 MAB21L1Q13394 359 aa13.47□□□□□ -0.25
ITGB1-210ENST00000474568 FAHD2BQ6P2I3 314 aaPredicted RBP13.47□□□□□ -0.25
ITGB1-210ENST00000474568 KRT77Q7Z794 578 aa13.47□□□□□ -0.25
ITGB1-210ENST00000474568 C19orf18Q8NEA5 215 aa13.47□□□□□ -0.25
ITGB1-210ENST00000474568 TMEM163Q8TC26 289 aa13.47□□□□□ -0.25
ITGB1-210ENST00000474568 FAHD2AQ96GK7 314 aa13.47□□□□□ -0.25
ITGB1-210ENST00000474568 OR10A2Q9H208 303 aa13.47□□□□□ -0.25
ITGB1-210ENST00000474568 H2AFY2Q9P0M6 372 aaPredicted RBP13.47□□□□□ -0.25
ITGB1-210ENST00000474568 COPS3Q9UNS2 423 aa13.47□□□□□ -0.25
ITGB1-210ENST00000474568 LRP12Q9Y561 859 aa13.47□□□□□ -0.25
ITGB1-210ENST00000474568 APOC1P02654 83 aa13.46□□□□□ -0.25
ITGB1-210ENST00000474568 ANPEPP15144 967 aa13.46□□□□□ -0.25
ITGB1-210ENST00000474568 ALOX5APP20292 161 aa13.46□□□□□ -0.25
ITGB1-210ENST00000474568 FAM3AP98173 230 aa13.46□□□□□ -0.25
ITGB1-210ENST00000474568 MPPED2Q15777 294 aa13.46□□□□□ -0.25
ITGB1-210ENST00000474568 MEPCEQ7L2J0 689 aaKnown RBP13.46□□□□□ -0.25
ITGB1-210ENST00000474568 PRSS45Q7RTY3 260 aa13.46□□□□□ -0.25
ITGB1-210ENST00000474568 RFLNBQ8N5W9 214 aa13.46□□□□□ -0.25
ITGB1-210ENST00000474568 BOLLQ8N9W6 283 aaKnown RBP13.46□□□□□ -0.25
ITGB1-210ENST00000474568 CNN2Q99439 309 aaKnown RBP13.46□□□□□ -0.25
ITGB1-210ENST00000474568 OSBPL10Q9BXB5 764 aa13.46□□□□□ -0.25
ITGB1-210ENST00000474568 YIPF3Q9GZM5 350 aa13.46□□□□□ -0.25
ITGB1-210ENST00000474568 SP140LQ9H930 580 aa13.46□□□□□ -0.25
ITGB1-210ENST00000474568 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.46□□□□□ -0.261e-6■■□□□ 14.5
ITGB1-210ENST00000474568 CUBNO60494 3623 aa13.46□□□□□ -0.26
ITGB1-210ENST00000474568 TRAV20A0A0B4J274 112 aa13.45□□□□□ -0.26
ITGB1-210ENST00000474568 A0A1B0GWJ7 208 aa13.45□□□□□ -0.26
ITGB1-210ENST00000474568 ANKRD30BLA7E2S9 258 aa13.45□□□□□ -0.26
ITGB1-210ENST00000474568 PRR32B1ATL7 298 aa13.45□□□□□ -0.26
ITGB1-210ENST00000474568 FAM20BO75063 409 aa13.45□□□□□ -0.26
ITGB1-210ENST00000474568 GRPP07492 148 aa13.45□□□□□ -0.26
ITGB1-210ENST00000474568 IRF2P14316 349 aa13.45□□□□□ -0.26
ITGB1-210ENST00000474568 CD200P41217 278 aa13.45□□□□□ -0.26
ITGB1-210ENST00000474568 SEC61A1P61619 476 aaKnown RBP13.45□□□□□ -0.26
ITGB1-210ENST00000474568 SRSF2Q01130 221 aaKnown RBP13.45□□□□□ -0.26
ITGB1-210ENST00000474568 AADACL4Q5VUY2 407 aa13.45□□□□□ -0.26
ITGB1-210ENST00000474568 LRRC28Q86X40 367 aaPredicted RBP13.45□□□□□ -0.26
ITGB1-210ENST00000474568 KLHL36Q8N4N3 616 aa13.45□□□□□ -0.26
ITGB1-210ENST00000474568 SPICQ8N5J4 248 aa13.45□□□□□ -0.26
ITGB1-210ENST00000474568 OR52H1Q8NGJ2 320 aa13.45□□□□□ -0.26
ITGB1-210ENST00000474568 SPSB4Q96A44 273 aa13.45□□□□□ -0.26
ITGB1-210ENST00000474568 MDFIQ99750 246 aa13.45□□□□□ -0.26
ITGB1-210ENST00000474568 RBM4BQ9BQ04 359 aaKnown RBP13.45□□□□□ -0.26
ITGB1-210ENST00000474568 SLC22A4Q9H015 551 aa13.45□□□□□ -0.26
ITGB1-210ENST00000474568 OPA3Q9H6K4 179 aa13.45□□□□□ -0.26
ITGB1-210ENST00000474568 PPP1R3EQ9H7J1 279 aa13.45□□□□□ -0.26
ITGB1-210ENST00000474568 MRPL15Q9P015 296 aaKnown RBP13.45□□□□□ -0.26
ITGB1-210ENST00000474568 ENOPH1Q9UHY7 261 aa13.45□□□□□ -0.26
ITGB1-210ENST00000474568 IKZF2Q9UKS7 526 aa13.45□□□□□ -0.26
ITGB1-210ENST00000474568 hCG_38984A0A1B0GV85 526 aa13.44□□□□□ -0.26
ITGB1-210ENST00000474568 LRRC30A6NM36 301 aa13.44□□□□□ -0.26
ITGB1-210ENST00000474568 EI24O14681 340 aa13.44□□□□□ -0.26
ITGB1-210ENST00000474568 MAGEB4O15481 346 aaPredicted RBP13.44□□□□□ -0.26
ITGB1-210ENST00000474568 GMDSO60547 372 aa13.44□□□□□ -0.26
ITGB1-210ENST00000474568 APOL3O95236 402 aa13.44□□□□□ -0.26
ITGB1-210ENST00000474568 PCMT1P22061 227 aa13.44□□□□□ -0.26
ITGB1-210ENST00000474568 ZFP36P26651 326 aaKnown RBP13.44□□□□□ -0.26
ITGB1-210ENST00000474568 MDH2P40926 338 aaKnown RBP13.44□□□□□ -0.26
ITGB1-210ENST00000474568 GSK3AP49840 483 aa13.44□□□□□ -0.26
ITGB1-210ENST00000474568 PSMA6P60900 246 aaKnown RBP13.44□□□□□ -0.26
ITGB1-210ENST00000474568 EFNB1P98172 346 aa13.44□□□□□ -0.26
ITGB1-210ENST00000474568 ZIK1Q3SY52 487 aaPredicted RBP13.44□□□□□ -0.26
ITGB1-210ENST00000474568 TMEM155Q4W5P6 130 aa13.44□□□□□ -0.26
ITGB1-210ENST00000474568 NXNL2Q5VZ03 156 aa13.44□□□□□ -0.26
ITGB1-210ENST00000474568 ZFP1Q6P2D0 407 aa13.44□□□□□ -0.26
ITGB1-210ENST00000474568 SLC35F2Q8IXU6 374 aa13.44□□□□□ -0.26
ITGB1-210ENST00000474568 DEFB108BQ8NET1 73 aa13.44□□□□□ -0.26
ITGB1-210ENST00000474568 OR8B12Q8NGG6 310 aa13.44□□□□□ -0.26
ITGB1-210ENST00000474568 OR11L1Q8NGX0 322 aa13.44□□□□□ -0.26
ITGB1-210ENST00000474568 TBX5Q99593 518 aa13.44□□□□□ -0.26
ITGB1-210ENST00000474568 GABARAPL3Q9BY60 117 aa13.44□□□□□ -0.26
ITGB1-210ENST00000474568 PATZ1Q9HBE1 687 aaKnown RBP13.44□□□□□ -0.26
ITGB1-210ENST00000474568 G6PC2Q9NQR9 355 aa13.44□□□□□ -0.26
ITGB1-210ENST00000474568 C1orf123Q9NWV4 160 aa13.44□□□□□ -0.26
ITGB1-210ENST00000474568 NOP16Q9Y3C1 178 aaKnown RBP13.44□□□□□ -0.26
ITGB1-210ENST00000474568 DYSFO75923 2080 aa13.43□□□□□ -0.26
ITGB1-210ENST00000474568 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.43□□□□□ -0.26
ITGB1-210ENST00000474568 SLC22A31A6NKX4 558 aa13.43□□□□□ -0.26
ITGB1-210ENST00000474568 A6NLC8 198 aa13.43□□□□□ -0.26
ITGB1-210ENST00000474568 CEACAM18A8MTB9 384 aa13.43□□□□□ -0.26
ITGB1-210ENST00000474568 IFNL4K9M1U5 179 aa13.43□□□□□ -0.26
ITGB1-210ENST00000474568 PNPP00491 289 aa13.43□□□□□ -0.26
ITGB1-210ENST00000474568 CD80P33681 288 aa13.43□□□□□ -0.26
ITGB1-210ENST00000474568 GATA4P43694 442 aa13.43□□□□□ -0.26
ITGB1-210ENST00000474568 DCAF12L2Q5VW00 463 aa13.43□□□□□ -0.26
ITGB1-210ENST00000474568 KCTD18Q6PI47 426 aaPredicted RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms