RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 XRCC2O43543 280 aa16.99■□□□□ 0.31
PDLIM4-206ENST00000474421 SOX14O95416 240 aa16.99■□□□□ 0.31
PDLIM4-206ENST00000474421 APOC1P02654 83 aa16.99■□□□□ 0.31
PDLIM4-206ENST00000474421 GYPBP06028 91 aa16.99■□□□□ 0.31
PDLIM4-206ENST00000474421 HKR1P10072 659 aa16.99■□□□□ 0.31
PDLIM4-206ENST00000474421 DDOSTP39656 456 aa16.99■□□□□ 0.31
PDLIM4-206ENST00000474421 PRKXP51817 358 aa16.99■□□□□ 0.31
PDLIM4-206ENST00000474421 PPP1R8Q12972 351 aaKnown RBP16.99■□□□□ 0.31
PDLIM4-206ENST00000474421 MPPED2Q15777 294 aa16.99■□□□□ 0.31
PDLIM4-206ENST00000474421 WDR25Q64LD2 544 aaPredicted RBP16.99■□□□□ 0.31
PDLIM4-206ENST00000474421 LYPD4Q6UWN0 246 aa16.99■□□□□ 0.31
PDLIM4-206ENST00000474421 CD300LDQ6UXZ3 194 aa16.99■□□□□ 0.31
PDLIM4-206ENST00000474421 BCL6BQ8N143 479 aaPredicted RBP16.99■□□□□ 0.31
PDLIM4-206ENST00000474421 OR4Q3Q8NH05 313 aa16.99■□□□□ 0.31
PDLIM4-206ENST00000474421 TEX47Q8TBZ9 253 aa16.99■□□□□ 0.31
PDLIM4-206ENST00000474421 LRGUKQ96M69 825 aa16.99■□□□□ 0.31
PDLIM4-206ENST00000474421 NUDT16L1Q9BRJ7 211 aaKnown RBP16.99■□□□□ 0.31
PDLIM4-206ENST00000474421 TOR3AQ9H497 397 aa16.99■□□□□ 0.31
PDLIM4-206ENST00000474421 ARMC1Q9NVT9 282 aa16.99■□□□□ 0.31
PDLIM4-206ENST00000474421 DNAJC9-AS1A6NH13 148 aa16.98■□□□□ 0.31
PDLIM4-206ENST00000474421 LGALS8O00214 317 aa16.98■□□□□ 0.31
PDLIM4-206ENST00000474421 NDUFA2O43678 99 aa16.98■□□□□ 0.31
PDLIM4-206ENST00000474421 ENSAO43768 121 aaKnown RBP16.98■□□□□ 0.31
PDLIM4-206ENST00000474421 RAP2AP10114 183 aa16.98■□□□□ 0.31
PDLIM4-206ENST00000474421 PSMB10P40306 273 aa16.98■□□□□ 0.31
PDLIM4-206ENST00000474421 CD276Q5ZPR3 534 aa16.98■□□□□ 0.31
PDLIM4-206ENST00000474421 OR10G2Q8NGC3 310 aa16.98■□□□□ 0.31
PDLIM4-206ENST00000474421 SLC25A28Q96A46 364 aa16.98■□□□□ 0.31
PDLIM4-206ENST00000474421 ASB9Q96DX5 294 aa16.98■□□□□ 0.31
PDLIM4-206ENST00000474421 CMC2Q9NRP2 79 aa16.98■□□□□ 0.31
PDLIM4-206ENST00000474421 C14orf119Q9NWQ9 140 aa16.98■□□□□ 0.31
PDLIM4-206ENST00000474421 VNN3Q9NY84 501 aa16.98■□□□□ 0.31
PDLIM4-206ENST00000474421 ERVK-18Q9QC07 812 aa16.98■□□□□ 0.31
PDLIM4-206ENST00000474421 TRAV38-1A0A0B4J264 116 aa16.97■□□□□ 0.31
PDLIM4-206ENST00000474421 CLDN34H7C241 214 aa16.97■□□□□ 0.31
PDLIM4-206ENST00000474421 PLATP00750 562 aa16.97■□□□□ 0.31
PDLIM4-206ENST00000474421 IGHV4-38-2P0DP08 117 aa16.97■□□□□ 0.31
PDLIM4-206ENST00000474421 PSKH1P11801 424 aa16.97■□□□□ 0.31
PDLIM4-206ENST00000474421 HOXB6P17509 224 aaKnown RBP16.97■□□□□ 0.31
PDLIM4-206ENST00000474421 BPIFB3P59826 476 aa16.97■□□□□ 0.31
PDLIM4-206ENST00000474421 MS4A2Q01362 244 aa16.97■□□□□ 0.31
PDLIM4-206ENST00000474421 CCDC197Q8NCU1 140 aa16.97■□□□□ 0.31
PDLIM4-206ENST00000474421 OR56B2PQ8NGI1 322 aa16.97■□□□□ 0.31
PDLIM4-206ENST00000474421 SPSB4Q96A44 273 aa16.97■□□□□ 0.31
PDLIM4-206ENST00000474421 MMADHCQ9H3L0 296 aaPredicted RBP16.97■□□□□ 0.31
PDLIM4-206ENST00000474421 N6AMT1Q9Y5N5 214 aa16.97■□□□□ 0.31
PDLIM4-206ENST00000474421 DHRS12A0PJE2 317 aa16.96■□□□□ 0.31
PDLIM4-206ENST00000474421 ARRDC5A6NEK1 342 aa16.96■□□□□ 0.31
PDLIM4-206ENST00000474421 ANKRD30BLA7E2S9 258 aa16.96■□□□□ 0.31
PDLIM4-206ENST00000474421 FAM107AO95990 144 aa16.96■□□□□ 0.31
PDLIM4-206ENST00000474421 RNASE1P07998 156 aaKnown RBP16.96■□□□□ 0.31
PDLIM4-206ENST00000474421 CLUP10909 449 aa16.96■□□□□ 0.31
PDLIM4-206ENST00000474421 SLC2A1P11166 492 aa16.96■□□□□ 0.31
PDLIM4-206ENST00000474421 CFL1P23528 166 aaKnown RBP16.96■□□□□ 0.31
PDLIM4-206ENST00000474421 HSD11B1P28845 292 aa16.96■□□□□ 0.31
PDLIM4-206ENST00000474421 EIF2B1Q14232 305 aaKnown RBP16.96■□□□□ 0.31
PDLIM4-206ENST00000474421 OR8B8Q15620 311 aa16.96■□□□□ 0.31
PDLIM4-206ENST00000474421 LYPD2Q6UXB3 125 aa16.96■□□□□ 0.31
PDLIM4-206ENST00000474421 ZNF841Q6ZN19 808 aa16.96■□□□□ 0.31
PDLIM4-206ENST00000474421 RHOUQ7L0Q8 258 aa16.96■□□□□ 0.31
PDLIM4-206ENST00000474421 GIPC3Q8TF64 312 aa16.96■□□□□ 0.31
PDLIM4-206ENST00000474421 ZNF48Q96MX3 618 aaPredicted RBP16.96■□□□□ 0.31
PDLIM4-206ENST00000474421 INTS14Q96SY0 518 aa16.96■□□□□ 0.31
PDLIM4-206ENST00000474421 KIF17Q9P2E2 1029 aa16.96■□□□□ 0.31
PDLIM4-206ENST00000474421 TRAV40A0A0B4J280 105 aa16.95■□□□□ 0.3
PDLIM4-206ENST00000474421 A6NLC8 198 aa16.95■□□□□ 0.3
PDLIM4-206ENST00000474421 H3BN98 237 aa16.95■□□□□ 0.3
PDLIM4-206ENST00000474421 TBX1O43435 398 aa16.95■□□□□ 0.3
PDLIM4-206ENST00000474421 LIPFP07098 398 aa16.95■□□□□ 0.3
PDLIM4-206ENST00000474421 ANXA2P07355 339 aaKnown RBP16.95■□□□□ 0.3
PDLIM4-206ENST00000474421 PAICSP22234 425 aaKnown RBP16.95■□□□□ 0.3
PDLIM4-206ENST00000474421 GRK5P34947 590 aa16.95■□□□□ 0.3
PDLIM4-206ENST00000474421 CX3CR1P49238 355 aa16.95■□□□□ 0.3
PDLIM4-206ENST00000474421 TIGD6Q17RP2 521 aa16.95■□□□□ 0.3
PDLIM4-206ENST00000474421 LINC01590Q5TEZ4 76 aa16.95■□□□□ 0.3
PDLIM4-206ENST00000474421 SPATC1Q76KD6 591 aa16.95■□□□□ 0.3
PDLIM4-206ENST00000474421 SHFQ7M4L6 423 aa16.95■□□□□ 0.3
PDLIM4-206ENST00000474421 ERI1Q8IV48 349 aaKnown RBP16.95■□□□□ 0.3
PDLIM4-206ENST00000474421 BOLLQ8N9W6 283 aaKnown RBP16.95■□□□□ 0.3
PDLIM4-206ENST00000474421 C19orf18Q8NEA5 215 aa16.95■□□□□ 0.3
PDLIM4-206ENST00000474421 OR52H1Q8NGJ2 320 aa16.95■□□□□ 0.3
PDLIM4-206ENST00000474421 OR8S1Q8NH09 359 aa16.95■□□□□ 0.3
PDLIM4-206ENST00000474421 TECTBQ96PL2 329 aa16.95■□□□□ 0.3
PDLIM4-206ENST00000474421 DUX5Q96PT3 197 aa16.95■□□□□ 0.3
PDLIM4-206ENST00000474421 FEVQ99581 238 aa16.95■□□□□ 0.3
PDLIM4-206ENST00000474421 NIPSNAP1Q9BPW8 284 aa16.95■□□□□ 0.3
PDLIM4-206ENST00000474421 C1orf21Q9H246 121 aa16.95■□□□□ 0.3
PDLIM4-206ENST00000474421 C1orf123Q9NWV4 160 aa16.95■□□□□ 0.3
PDLIM4-206ENST00000474421 IGHV3OR16-10A0A075B7F0 116 aa16.94■□□□□ 0.3
PDLIM4-206ENST00000474421 C5orf63A6NC05 138 aa16.94■□□□□ 0.3
PDLIM4-206ENST00000474421 OOEPA6NGQ2 149 aa16.94■□□□□ 0.3
PDLIM4-206ENST00000474421 C3orf80F5H4A9 247 aa16.94■□□□□ 0.3
PDLIM4-206ENST00000474421 CST1P01037 141 aa16.94■□□□□ 0.3
PDLIM4-206ENST00000474421 GRPP07492 148 aa16.94■□□□□ 0.3
PDLIM4-206ENST00000474421 GSTT1P30711 240 aa16.94■□□□□ 0.3
PDLIM4-206ENST00000474421 FGF12P61328 243 aa16.94■□□□□ 0.3
PDLIM4-206ENST00000474421 SNCBQ16143 134 aa16.94■□□□□ 0.3
PDLIM4-206ENST00000474421 C11orf91Q3C1V1 193 aa16.94■□□□□ 0.3
PDLIM4-206ENST00000474421 GPR157Q5UAW9 335 aa16.94■□□□□ 0.3
PDLIM4-206ENST00000474421 SFRP4Q6FHJ7 346 aaPredicted RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms