RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 ZNF665Q9H7R5 613 aa12.02□□□□□ -0.49
VAMP4-203ENST00000474047 GCM1Q9NP62 436 aa12.02□□□□□ -0.49
VAMP4-203ENST00000474047 TMEM160Q9NX00 188 aa12.02□□□□□ -0.49
VAMP4-203ENST00000474047 LPAR3Q9UBY5 353 aa12.02□□□□□ -0.49
VAMP4-203ENST00000474047 IKZF2Q9UKS7 526 aa12.02□□□□□ -0.49
VAMP4-203ENST00000474047 KLHDC2Q9Y2U9 406 aa12.02□□□□□ -0.49
VAMP4-203ENST00000474047 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.01□□□□□ -0.49
VAMP4-203ENST00000474047 GMDSO60547 372 aa12.01□□□□□ -0.49
VAMP4-203ENST00000474047 PCMT1P22061 227 aa12.01□□□□□ -0.49
VAMP4-203ENST00000474047 DDOSTP39656 456 aa12.01□□□□□ -0.49
VAMP4-203ENST00000474047 ALDH3A2P51648 485 aa12.01□□□□□ -0.49
VAMP4-203ENST00000474047 MZT1Q08AG7 82 aa12.01□□□□□ -0.49
VAMP4-203ENST00000474047 ZIK1Q3SY52 487 aaPredicted RBP12.01□□□□□ -0.49
VAMP4-203ENST00000474047 MOGAT3Q86VF5 341 aa12.01□□□□□ -0.49
VAMP4-203ENST00000474047 GLCCI1Q86VQ1 547 aa12.01□□□□□ -0.49
VAMP4-203ENST00000474047 KLHL36Q8N4N3 616 aa12.01□□□□□ -0.49
VAMP4-203ENST00000474047 CBR4Q8N4T8 237 aa12.01□□□□□ -0.49
VAMP4-203ENST00000474047 OR56B2PQ8NGI1 322 aa12.01□□□□□ -0.49
VAMP4-203ENST00000474047 OR8J1Q8NGP2 316 aa12.01□□□□□ -0.49
VAMP4-203ENST00000474047 OR11L1Q8NGX0 322 aa12.01□□□□□ -0.49
VAMP4-203ENST00000474047 OR51F2Q8NH61 342 aa12.01□□□□□ -0.49
VAMP4-203ENST00000474047 SGK3Q96BR1 496 aa12.01□□□□□ -0.49
VAMP4-203ENST00000474047 ADAT1Q9BUB4 502 aaKnown RBP12.01□□□□□ -0.49
VAMP4-203ENST00000474047 MRPL15Q9P015 296 aaKnown RBP12.01□□□□□ -0.49
VAMP4-203ENST00000474047 LRP12Q9Y561 859 aa12.01□□□□□ -0.49
VAMP4-203ENST00000474047 SONP18583 2426 aaKnown RBP12.01□□□□□ -0.49
VAMP4-203ENST00000474047 PSMD9O00233 223 aa12□□□□□ -0.49
VAMP4-203ENST00000474047 PHYHO14832 338 aa12□□□□□ -0.49
VAMP4-203ENST00000474047 ALPLP05186 524 aa12□□□□□ -0.49
VAMP4-203ENST00000474047 LMO4P61968 165 aa12□□□□□ -0.49
VAMP4-203ENST00000474047 EFNB1P98172 346 aa12□□□□□ -0.49
VAMP4-203ENST00000474047 AADACL4Q5VUY2 407 aa12□□□□□ -0.49
VAMP4-203ENST00000474047 SLC35F2Q8IXU6 374 aa12□□□□□ -0.49
VAMP4-203ENST00000474047 C1orf87Q8N0U7 546 aa12□□□□□ -0.49
VAMP4-203ENST00000474047 OR8S1Q8NH09 359 aa12□□□□□ -0.49
VAMP4-203ENST00000474047 ZNF420Q8TAQ5 688 aaPredicted RBP12□□□□□ -0.49
VAMP4-203ENST00000474047 FAM81AQ8TBF8 368 aa12□□□□□ -0.49
VAMP4-203ENST00000474047 RFKQ969G6 155 aa12□□□□□ -0.49
VAMP4-203ENST00000474047 SPSB4Q96A44 273 aa12□□□□□ -0.49
VAMP4-203ENST00000474047 EME1Q96AY2 570 aa12□□□□□ -0.49
VAMP4-203ENST00000474047 MNTQ99583 582 aa12□□□□□ -0.49
VAMP4-203ENST00000474047 TTTY10Q9BZA0 68 aa12□□□□□ -0.49
VAMP4-203ENST00000474047 RGCCQ9H4X1 137 aa12□□□□□ -0.49
VAMP4-203ENST00000474047 DCAF16Q9NXF7 216 aa12□□□□□ -0.49
VAMP4-203ENST00000474047 USE1Q9NZ43 259 aa12□□□□□ -0.49
VAMP4-203ENST00000474047 WARS2Q9UGM6 360 aaKnown RBP12□□□□□ -0.49
VAMP4-203ENST00000474047 MALRD1Q5VYJ5 2156 aa12□□□□□ -0.49
VAMP4-203ENST00000474047 NF1P21359 2839 aa12□□□□□ -0.49
VAMP4-203ENST00000474047 TMEM269A0A1B0GVZ9 245 aa12□□□□□ -0.49
VAMP4-203ENST00000474047 FAM157AC9JC47 383 aa12□□□□□ -0.49
VAMP4-203ENST00000474047 ZNF670-ZNF695F2Z2N8 137 aa12□□□□□ -0.49
VAMP4-203ENST00000474047 ZNF254O75437 659 aa12□□□□□ -0.49
VAMP4-203ENST00000474047 MSMBP08118 114 aa12□□□□□ -0.49
VAMP4-203ENST00000474047 ANOS1P23352 680 aa12□□□□□ -0.49
VAMP4-203ENST00000474047 GNALP38405 381 aa12□□□□□ -0.49
VAMP4-203ENST00000474047 MMP16P51512 607 aa12□□□□□ -0.49
VAMP4-203ENST00000474047 RIDAP52758 137 aaKnown RBP12□□□□□ -0.49
VAMP4-203ENST00000474047 DVL1P1P54792 670 aaPredicted RBP12□□□□□ -0.49
VAMP4-203ENST00000474047 PSMA6P60900 246 aaKnown RBP12□□□□□ -0.49
VAMP4-203ENST00000474047 FAM3AP98173 230 aa12□□□□□ -0.49
VAMP4-203ENST00000474047 SNCBQ16143 134 aa12□□□□□ -0.49
VAMP4-203ENST00000474047 FAM120AOSQ5T036 256 aa12□□□□□ -0.49
VAMP4-203ENST00000474047 DEGS2Q6QHC5 323 aa12□□□□□ -0.49
VAMP4-203ENST00000474047 ZBTB49Q6ZSB9 765 aa12□□□□□ -0.49
VAMP4-203ENST00000474047 COMMD2Q86X83 199 aa12□□□□□ -0.49
VAMP4-203ENST00000474047 PQLC1Q8N2U9 271 aa12□□□□□ -0.49
VAMP4-203ENST00000474047 FTMTQ8N4E7 242 aa12□□□□□ -0.49
VAMP4-203ENST00000474047 SPICQ8N5J4 248 aa12□□□□□ -0.49
VAMP4-203ENST00000474047 CELF2-AS1Q8N7Q2 184 aa12□□□□□ -0.49
VAMP4-203ENST00000474047 SPERTQ8NA61 448 aa12□□□□□ -0.49
VAMP4-203ENST00000474047 OR51G2Q8NGK0 314 aa12□□□□□ -0.49
VAMP4-203ENST00000474047 C1orf159Q96HA4 380 aa12□□□□□ -0.49
VAMP4-203ENST00000474047 UFSP2Q9NUQ7 469 aa12□□□□□ -0.49
VAMP4-203ENST00000474047 C14orf119Q9NWQ9 140 aa12□□□□□ -0.49
VAMP4-203ENST00000474047 TANC2Q9HCD6 1990 aa12□□□□□ -0.49
VAMP4-203ENST00000474047 TMEM178BH3BS89 294 aa11.99□□□□□ -0.49
VAMP4-203ENST00000474047 CYB5R3P00387 301 aaPredicted RBP11.99□□□□□ -0.49
VAMP4-203ENST00000474047 IFNA2P01563 188 aa11.99□□□□□ -0.49
VAMP4-203ENST00000474047 IGHV2-5P01817 119 aa11.99□□□□□ -0.49
VAMP4-203ENST00000474047 GSK3AP49840 483 aa11.99□□□□□ -0.49
VAMP4-203ENST00000474047 CXCR4P61073 352 aa11.99□□□□□ -0.49
VAMP4-203ENST00000474047 BTG1P62324 171 aa11.99□□□□□ -0.49
VAMP4-203ENST00000474047 POU4F2Q12837 409 aa11.99□□□□□ -0.49
VAMP4-203ENST00000474047 CR1LQ2VPA4 569 aa11.99□□□□□ -0.49
VAMP4-203ENST00000474047 ZNF829Q3KNS6 432 aaPredicted RBP11.99□□□□□ -0.49
VAMP4-203ENST00000474047 KLBQ86Z14 1044 aa11.99□□□□□ -0.49
VAMP4-203ENST00000474047 ZNF679Q8IYX0 411 aa11.99□□□□□ -0.49
VAMP4-203ENST00000474047 CSNK2A3Q8NEV1 391 aa11.99□□□□□ -0.49
VAMP4-203ENST00000474047 ERGIC1Q969X5 290 aa11.99□□□□□ -0.49
VAMP4-203ENST00000474047 TMEM186Q96B77 213 aa11.99□□□□□ -0.49
VAMP4-203ENST00000474047 FN3KRPQ9HA64 309 aa11.99□□□□□ -0.49
VAMP4-203ENST00000474047 ADGRL4Q9HBW9 690 aa11.99□□□□□ -0.49
VAMP4-203ENST00000474047 HIF1ANQ9NWT6 349 aa11.99□□□□□ -0.49
VAMP4-203ENST00000474047 HAO2Q9NYQ3 351 aa11.99□□□□□ -0.49
VAMP4-203ENST00000474047 GTF2A1LQ9UNN4 478 aa11.99□□□□□ -0.49
VAMP4-203ENST00000474047 NAV3Q8IVL0 2385 aa11.99□□□□□ -0.49
VAMP4-203ENST00000474047 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.98□□□□□ -0.49
VAMP4-203ENST00000474047 ACOD1A6NK06 481 aa11.98□□□□□ -0.49
VAMP4-203ENST00000474047 IGHV2-70P01814 119 aa11.98□□□□□ -0.49
VAMP4-203ENST00000474047 GRPP07492 148 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms