RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 NAB1Q13506 487 aa3.06□□□□□ -1.92
BRCA1-212ENST00000473961 KIAA0087Q14695 138 aa3.06□□□□□ -1.92
BRCA1-212ENST00000473961 PSME4Q14997 1843 aa3.06□□□□□ -1.92
BRCA1-212ENST00000473961 CDK10Q15131 360 aa3.06□□□□□ -1.92
BRCA1-212ENST00000473961 TMED2Q15363 201 aa3.06□□□□□ -1.92
BRCA1-212ENST00000473961 ALX1Q15699 326 aa3.06□□□□□ -1.92
BRCA1-212ENST00000473961 PSMD5Q16401 504 aa3.06□□□□□ -1.92
BRCA1-212ENST00000473961 LY6G6FQ5SQ64 297 aa3.06□□□□□ -1.92
BRCA1-212ENST00000473961 C9orf129Q5T035 196 aaKnown RBP3.06□□□□□ -1.92
BRCA1-212ENST00000473961 FHL5Q5TD97 284 aa3.06□□□□□ -1.92
BRCA1-212ENST00000473961 PPP1R2P3Q6NXS1 205 aa3.06□□□□□ -1.92
BRCA1-212ENST00000473961 PLEKHG7Q6ZR37 379 aa3.06□□□□□ -1.92
BRCA1-212ENST00000473961 Q6ZSR3 168 aa3.06□□□□□ -1.92
BRCA1-212ENST00000473961 ASCL5Q7RTU5 278 aa3.06□□□□□ -1.92
BRCA1-212ENST00000473961 RALGPS2Q86X27 583 aaPredicted RBP3.06□□□□□ -1.92
BRCA1-212ENST00000473961 TCAIMQ8N3R3 496 aa3.06□□□□□ -1.92
BRCA1-212ENST00000473961 ZADH2Q8N4Q0 377 aa3.06□□□□□ -1.92
BRCA1-212ENST00000473961 TTLQ8NG68 377 aa3.06□□□□□ -1.92
BRCA1-212ENST00000473961 OR10R2Q8NGX6 335 aa3.06□□□□□ -1.92
BRCA1-212ENST00000473961 LYPD6BQ8NI32 183 aa3.06□□□□□ -1.92
BRCA1-212ENST00000473961 MARCH1Q8TCQ1 289 aa3.06□□□□□ -1.92
BRCA1-212ENST00000473961 MCOLN3Q8TDD5 553 aa3.06□□□□□ -1.92
BRCA1-212ENST00000473961 GEMIN6Q8WXD5 167 aaKnown RBP3.06□□□□□ -1.92
BRCA1-212ENST00000473961 TMEM54Q969K7 222 aa3.06□□□□□ -1.92
BRCA1-212ENST00000473961 CMTM5Q96DZ9 223 aa3.06□□□□□ -1.92
BRCA1-212ENST00000473961 NRBF2Q96F24 287 aa3.06□□□□□ -1.92
BRCA1-212ENST00000473961 ATAD5Q96QE3 1844 aa3.06□□□□□ -1.92
BRCA1-212ENST00000473961 P2RX4Q99571 388 aa3.06□□□□□ -1.92
BRCA1-212ENST00000473961 RASL11BQ9BPW5 248 aa3.06□□□□□ -1.92
BRCA1-212ENST00000473961 DCUN1D5Q9BTE7 237 aa3.06□□□□□ -1.92
BRCA1-212ENST00000473961 TEKT3Q9BXF9 490 aa3.06□□□□□ -1.92
BRCA1-212ENST00000473961 KIF13AQ9H1H9 1805 aa3.06□□□□□ -1.92
BRCA1-212ENST00000473961 GOLPH3Q9H4A6 298 aa3.06□□□□□ -1.92
BRCA1-212ENST00000473961 RGCCQ9H4X1 137 aa3.06□□□□□ -1.92
BRCA1-212ENST00000473961 FAM96AQ9H5X1 160 aa3.06□□□□□ -1.92
BRCA1-212ENST00000473961 NTN4Q9HB63 628 aa3.06□□□□□ -1.92
BRCA1-212ENST00000473961 ZC4H2Q9NQZ6 224 aa3.06□□□□□ -1.92
BRCA1-212ENST00000473961 FBXO6Q9NRD1 293 aaPredicted RBP3.06□□□□□ -1.92
BRCA1-212ENST00000473961 SLC39A1Q9NY26 324 aa3.06□□□□□ -1.92
BRCA1-212ENST00000473961 TAS2R7Q9NYW3 318 aa3.06□□□□□ -1.92
BRCA1-212ENST00000473961 MTCH1Q9NZJ7 389 aa3.06□□□□□ -1.92
BRCA1-212ENST00000473961 EMC3Q9P0I2 261 aa3.06□□□□□ -1.92
BRCA1-212ENST00000473961 PHRF1Q9P1Y6 1649 aaKnown RBP3.06□□□□□ -1.92
BRCA1-212ENST00000473961 POMPQ9Y244 141 aa3.06□□□□□ -1.92
BRCA1-212ENST00000473961 RNF11Q9Y3C5 154 aa3.06□□□□□ -1.92
BRCA1-212ENST00000473961 MMP24Q9Y5R2 645 aa3.06□□□□□ -1.92
BRCA1-212ENST00000473961 NWD2Q9ULI1 1742 aa3.05□□□□□ -1.92
BRCA1-212ENST00000473961 THSD7BQ9C0I4 1608 aa3.05□□□□□ -1.92
BRCA1-212ENST00000473961 MRC2Q9UBG0 1479 aa3.05□□□□□ -1.92
BRCA1-212ENST00000473961 MN1Q10571 1320 aaPredicted RBP3.05□□□□□ -1.92
BRCA1-212ENST00000473961 GSTTP1A0A1W2PQM5 241 aa3.05□□□□□ -1.92
BRCA1-212ENST00000473961 A0A1W2PRD5 423 aa3.05□□□□□ -1.92
BRCA1-212ENST00000473961 PSMB11A5LHX3 300 aa3.05□□□□□ -1.92
BRCA1-212ENST00000473961 ERVV-1B6SEH8 477 aa3.05□□□□□ -1.92
BRCA1-212ENST00000473961 TRIM49D1C9J1S8 452 aa3.05□□□□□ -1.92
BRCA1-212ENST00000473961 I3L4J1 428 aa3.05□□□□□ -1.92
BRCA1-212ENST00000473961 J3QRK9 145 aa3.05□□□□□ -1.92
BRCA1-212ENST00000473961 hCG_2039718K7EN88 272 aa3.05□□□□□ -1.92
BRCA1-212ENST00000473961 OR5F1O95221 314 aa3.05□□□□□ -1.92
BRCA1-212ENST00000473961 ASS1P00966 412 aaKnown RBP3.05□□□□□ -1.92
BRCA1-212ENST00000473961 IGKV3-15P01624 115 aa3.05□□□□□ -1.92
BRCA1-212ENST00000473961 SERPINA5P05154 406 aa3.05□□□□□ -1.92
BRCA1-212ENST00000473961 KRT7P08729 469 aa3.05□□□□□ -1.92
BRCA1-212ENST00000473961 ACSM4P0C7M7 580 aa3.05□□□□□ -1.92
BRCA1-212ENST00000473961 CHTF8P0CG12 524 aa3.05□□□□□ -1.92
BRCA1-212ENST00000473961 SMIM10L1P0DMW3 83 aa3.05□□□□□ -1.92
BRCA1-212ENST00000473961 IVDP26440 423 aa3.05□□□□□ -1.92
BRCA1-212ENST00000473961 TALDO1P37837 337 aa3.05□□□□□ -1.92
BRCA1-212ENST00000473961 TNFSF9P41273 254 aa3.05□□□□□ -1.92
BRCA1-212ENST00000473961 CDKN1BP46527 198 aa3.05□□□□□ -1.92
BRCA1-212ENST00000473961 RPS5P46782 204 aaKnown RBP3.05□□□□□ -1.92
BRCA1-212ENST00000473961 SERPINB10P48595 397 aa3.05□□□□□ -1.92
BRCA1-212ENST00000473961 CLDN18P56856 261 aa3.05□□□□□ -1.92
BRCA1-212ENST00000473961 EIF3EP60228 445 aaKnown RBP3.05□□□□□ -1.92
BRCA1-212ENST00000473961 COPZ1P61923 177 aa3.05□□□□□ -1.92
BRCA1-212ENST00000473961 POLR2GP62487 172 aaKnown RBP eCLIP3.05□□□□□ -1.92
BRCA1-212ENST00000473961 KDSRQ06136 332 aa3.05□□□□□ -1.92
BRCA1-212ENST00000473961 BAMBIQ13145 260 aa3.05□□□□□ -1.92
BRCA1-212ENST00000473961 AQP6Q13520 282 aa3.05□□□□□ -1.92
BRCA1-212ENST00000473961 GPNMBQ14956 572 aa3.05□□□□□ -1.92
BRCA1-212ENST00000473961 NCF4Q15080 339 aa3.05□□□□□ -1.92
BRCA1-212ENST00000473961 TSC22D1Q15714 1073 aa3.05□□□□□ -1.92
BRCA1-212ENST00000473961 ZNF239Q16600 458 aaKnown RBP3.05□□□□□ -1.92
BRCA1-212ENST00000473961 RFX4Q33E94 735 aa3.05□□□□□ -1.92
BRCA1-212ENST00000473961 PAGE3Q5JUK9 113 aa3.05□□□□□ -1.92
BRCA1-212ENST00000473961 VAX1Q5SQQ9 334 aa3.05□□□□□ -1.92
BRCA1-212ENST00000473961 C6orf52Q5T4I8 152 aa3.05□□□□□ -1.92
BRCA1-212ENST00000473961 GPR107Q5VW38 600 aa3.05□□□□□ -1.92
BRCA1-212ENST00000473961 OTPQ5XKR4 325 aa3.05□□□□□ -1.92
BRCA1-212ENST00000473961 SPINK14Q6IE38 97 aa3.05□□□□□ -1.92
BRCA1-212ENST00000473961 TTC33Q6PID6 262 aaPredicted RBP3.05□□□□□ -1.92
BRCA1-212ENST00000473961 CAMK2N1Q7Z7J9 78 aa3.05□□□□□ -1.92
BRCA1-212ENST00000473961 TMEM150AQ86TG1 271 aa3.05□□□□□ -1.92
BRCA1-212ENST00000473961 OAFQ86UD1 273 aa3.05□□□□□ -1.92
BRCA1-212ENST00000473961 HORMAD1Q86X24 394 aa3.05□□□□□ -1.92
BRCA1-212ENST00000473961 SLC13A5Q86YT5 568 aaPredicted RBP3.05□□□□□ -1.92
BRCA1-212ENST00000473961 CMTM1Q8IZ96 169 aa3.05□□□□□ -1.92
BRCA1-212ENST00000473961 TMEM61Q8N0U2 210 aa3.05□□□□□ -1.92
BRCA1-212ENST00000473961 LINC00612Q8N6U2 182 aa3.05□□□□□ -1.92
BRCA1-212ENST00000473961 PACRGLQ8N7B6 248 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms