RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 CSNK2BP67870 215 aa10.31□□□□□ -0.76
TRAF4-209ENST00000473421 PCK2Q16822 640 aa10.31□□□□□ -0.76
TRAF4-209ENST00000473421 WDR38Q5JTN6 314 aa10.31□□□□□ -0.76
TRAF4-209ENST00000473421 GLYATL3Q5SZD4 288 aa10.31□□□□□ -0.76
TRAF4-209ENST00000473421 TEX36Q5VZQ5 186 aa10.31□□□□□ -0.76
TRAF4-209ENST00000473421 C11orf87Q6NUJ2 197 aa10.31□□□□□ -0.76
TRAF4-209ENST00000473421 LYPD4Q6UWN0 246 aa10.31□□□□□ -0.76
TRAF4-209ENST00000473421 RNF113BQ8IZP6 322 aaKnown RBP10.31□□□□□ -0.76
TRAF4-209ENST00000473421 OR5T2Q8NGG2 359 aa10.31□□□□□ -0.76
TRAF4-209ENST00000473421 GPX7Q96SL4 187 aaPredicted RBP10.31□□□□□ -0.76
TRAF4-209ENST00000473421 NMNAT3Q96T66 252 aa10.31□□□□□ -0.76
TRAF4-209ENST00000473421 MRPL22Q9NWU5 206 aaKnown RBP10.31□□□□□ -0.76
TRAF4-209ENST00000473421 KPTNQ9Y664 436 aa10.31□□□□□ -0.76
TRAF4-209ENST00000473421 A0A0G2JND7 137 aa10.3□□□□□ -0.76
TRAF4-209ENST00000473421 TRBV4-1A0A0J9YWV2 114 aa10.3□□□□□ -0.76
TRAF4-209ENST00000473421 LOC100653049A0A140TA62 436 aa10.3□□□□□ -0.76
TRAF4-209ENST00000473421 A0A1B0GVI7 797 aa10.3□□□□□ -0.76
TRAF4-209ENST00000473421 A6NLC8 198 aa10.3□□□□□ -0.76
TRAF4-209ENST00000473421 ACOT8O14734 319 aa10.3□□□□□ -0.76
TRAF4-209ENST00000473421 MRASO14807 208 aa10.3□□□□□ -0.76
TRAF4-209ENST00000473421 KRT34O76011 436 aa10.3□□□□□ -0.76
TRAF4-209ENST00000473421 IFNA14P01570 189 aa10.3□□□□□ -0.76
TRAF4-209ENST00000473421 IFNW1P05000 195 aa10.3□□□□□ -0.76
TRAF4-209ENST00000473421 FBP1P09467 338 aa10.3□□□□□ -0.76
TRAF4-209ENST00000473421 LOXL3P58215 753 aa10.3□□□□□ -0.76
TRAF4-209ENST00000473421 LY6EQ16553 131 aa10.3□□□□□ -0.76
TRAF4-209ENST00000473421 GPR139Q6DWJ6 353 aa10.3□□□□□ -0.76
TRAF4-209ENST00000473421 HCP5Q6MZN7 132 aa10.3□□□□□ -0.76
TRAF4-209ENST00000473421 ERICH5Q6P6B1 374 aa10.3□□□□□ -0.76
TRAF4-209ENST00000473421 CRIP3Q6Q6R5 217 aa10.3□□□□□ -0.76
TRAF4-209ENST00000473421 MRPL21Q7Z2W9 205 aaKnown RBP10.3□□□□□ -0.76
TRAF4-209ENST00000473421 KLHDC1Q8N7A1 406 aa10.3□□□□□ -0.76
TRAF4-209ENST00000473421 OR2T12Q8NG77 320 aa10.3□□□□□ -0.76
TRAF4-209ENST00000473421 RSRC1Q96IZ7 334 aaKnown RBP10.3□□□□□ -0.76
TRAF4-209ENST00000473421 ATF6BQ99941 703 aa10.3□□□□□ -0.76
TRAF4-209ENST00000473421 KAAG1Q9UBP8 84 aa10.3□□□□□ -0.76
TRAF4-209ENST00000473421 CYB5R1Q9UHQ9 305 aa10.3□□□□□ -0.76
TRAF4-209ENST00000473421 hCG_1807616A0A1W2PRN6 198 aa10.29□□□□□ -0.76
TRAF4-209ENST00000473421 OR6C68A6NDL8 312 aa10.29□□□□□ -0.76
TRAF4-209ENST00000473421 ANKRD61A6NGH8 418 aa10.29□□□□□ -0.76
TRAF4-209ENST00000473421 ADARB2-AS1A8MUL3 147 aa10.29□□□□□ -0.76
TRAF4-209ENST00000473421 H3BUX3 64 aa10.29□□□□□ -0.76
TRAF4-209ENST00000473421 CHST1O43916 411 aa10.29□□□□□ -0.76
TRAF4-209ENST00000473421 GMDSO60547 372 aa10.29□□□□□ -0.76
TRAF4-209ENST00000473421 DIRAS1O95057 198 aa10.29□□□□□ -0.76
TRAF4-209ENST00000473421 ZNF682O95780 498 aa10.29□□□□□ -0.76
TRAF4-209ENST00000473421 SLC2A1P11166 492 aa10.29□□□□□ -0.76
TRAF4-209ENST00000473421 KLF10Q13118 480 aa10.29□□□□□ -0.76
TRAF4-209ENST00000473421 IKZF1Q13422 519 aa10.29□□□□□ -0.76
TRAF4-209ENST00000473421 HABP2Q14520 560 aaPredicted RBP10.29□□□□□ -0.76
TRAF4-209ENST00000473421 AGBL2Q5U5Z8 902 aa10.29□□□□□ -0.76
TRAF4-209ENST00000473421 METAP1DQ6UB28 335 aaPredicted RBP10.29□□□□□ -0.76
TRAF4-209ENST00000473421 Q6ZTK2 550 aa10.29□□□□□ -0.76
TRAF4-209ENST00000473421 ADCK1Q86TW2 530 aa10.29□□□□□ -0.76
TRAF4-209ENST00000473421 OR56B2PQ8NGI1 322 aa10.29□□□□□ -0.76
TRAF4-209ENST00000473421 OR4K13Q8NH42 304 aa10.29□□□□□ -0.76
TRAF4-209ENST00000473421 LRRC29Q8WV35 223 aa10.29□□□□□ -0.76
TRAF4-209ENST00000473421 STON2Q8WXE9 905 aa10.29□□□□□ -0.76
TRAF4-209ENST00000473421 LRTOMTQ8WZ04 291 aa10.29□□□□□ -0.76
TRAF4-209ENST00000473421 HSH2DQ96JZ2 352 aa10.29□□□□□ -0.76
TRAF4-209ENST00000473421 ERMAPQ96PL5 475 aaPredicted RBP10.29□□□□□ -0.76
TRAF4-209ENST00000473421 SH3GL1Q99961 368 aa10.29□□□□□ -0.76
TRAF4-209ENST00000473421 MMP28Q9H239 520 aa10.29□□□□□ -0.76
TRAF4-209ENST00000473421 RPRD1BQ9NQG5 326 aaKnown RBP10.29□□□□□ -0.76
TRAF4-209ENST00000473421 MEIOCA2RUB1 952 aa10.28□□□□□ -0.76
TRAF4-209ENST00000473421 GGT3PA6NGU5 568 aa10.28□□□□□ -0.76
TRAF4-209ENST00000473421 M0R135 149 aa10.28□□□□□ -0.76
TRAF4-209ENST00000473421 NDUFA2O43678 99 aa10.28□□□□□ -0.76
TRAF4-209ENST00000473421 ECDO95905 644 aaPredicted RBP10.28□□□□□ -0.76
TRAF4-209ENST00000473421 CD28P10747 220 aa10.28□□□□□ -0.76
TRAF4-209ENST00000473421 HIST1H1CP16403 213 aaKnown RBP10.28□□□□□ -0.76
TRAF4-209ENST00000473421 GMFBP60983 142 aa10.28□□□□□ -0.76
TRAF4-209ENST00000473421 MALLQ13021 153 aa10.28□□□□□ -0.76
TRAF4-209ENST00000473421 KCNJ8Q15842 424 aa10.28□□□□□ -0.76
TRAF4-209ENST00000473421 RFX4Q33E94 735 aa10.28□□□□□ -0.76
TRAF4-209ENST00000473421 NSUN5P1Q3KNT7 163 aa10.28□□□□□ -0.76
TRAF4-209ENST00000473421 CCBE1Q6UXH8 406 aaPredicted RBP10.28□□□□□ -0.76
TRAF4-209ENST00000473421 DPY19L2P2Q6ZN68 376 aa10.28□□□□□ -0.76
TRAF4-209ENST00000473421 PHF21AQ96BD5 680 aa10.28□□□□□ -0.76
TRAF4-209ENST00000473421 ZNF799Q96GE5 643 aa10.28□□□□□ -0.76
TRAF4-209ENST00000473421 FUZQ9BT04 418 aa10.28□□□□□ -0.76
TRAF4-209ENST00000473421 DCTN5Q9BTE1 182 aa10.28□□□□□ -0.76
TRAF4-209ENST00000473421 TMEM120AQ9BXJ8 343 aa10.28□□□□□ -0.76
TRAF4-209ENST00000473421 WDR13Q9H1Z4 485 aa10.28□□□□□ -0.76
TRAF4-209ENST00000473421 ELL3Q9HB65 397 aaPredicted RBP10.28□□□□□ -0.76
TRAF4-209ENST00000473421 SNTG1Q9NSN8 517 aa10.28□□□□□ -0.76
TRAF4-209ENST00000473421 PRPF19Q9UMS4 504 aaKnown RBP10.28□□□□□ -0.76
TRAF4-209ENST00000473421 N6AMT1Q9Y5N5 214 aa10.28□□□□□ -0.76
TRAF4-209ENST00000473421 TVP23AA6NH52 213 aa10.27□□□□□ -0.77
TRAF4-209ENST00000473421 UNC119BA6NIH7 251 aa10.27□□□□□ -0.77
TRAF4-209ENST00000473421 EDF1O60869 148 aaKnown RBP10.27□□□□□ -0.77
TRAF4-209ENST00000473421 VSIG10L2P0DP72 767 aa10.27□□□□□ -0.77
TRAF4-209ENST00000473421 NCK1P16333 377 aa10.27□□□□□ -0.77
TRAF4-209ENST00000473421 CRABP1P29762 137 aa10.27□□□□□ -0.77
TRAF4-209ENST00000473421 OTX1P32242 354 aaPredicted RBP10.27□□□□□ -0.77
TRAF4-209ENST00000473421 PYCR1P32322 319 aa10.27□□□□□ -0.77
TRAF4-209ENST00000473421 KIR2DS4P43632 304 aa10.27□□□□□ -0.77
TRAF4-209ENST00000473421 TGM4P49221 684 aa10.27□□□□□ -0.77
TRAF4-209ENST00000473421 IFI44LQ53G44 452 aa10.27□□□□□ -0.77
TRAF4-209ENST00000473421 ZBTB37Q5TC79 503 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms