RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 IFNL4K9M1U5 179 aa12.06□□□□□ -0.48
BRCA1-211ENST00000472490 GMDSO60547 372 aa12.06□□□□□ -0.48
BRCA1-211ENST00000472490 CDC14BO60729 498 aa12.06□□□□□ -0.48
BRCA1-211ENST00000472490 SULT1C4O75897 302 aa12.06□□□□□ -0.48
BRCA1-211ENST00000472490 COL8A2P25067 703 aa12.06□□□□□ -0.48
BRCA1-211ENST00000472490 CHN2P52757 468 aa12.06□□□□□ -0.48
BRCA1-211ENST00000472490 IL5RAQ01344 420 aa12.06□□□□□ -0.48
BRCA1-211ENST00000472490 IL18R1Q13478 541 aa12.06□□□□□ -0.48
BRCA1-211ENST00000472490 CLEC9AQ6UXN8 241 aa12.06□□□□□ -0.48
BRCA1-211ENST00000472490 Q6ZR03 302 aa12.06□□□□□ -0.48
BRCA1-211ENST00000472490 FAM220AQ7Z4H9 259 aa12.06□□□□□ -0.48
BRCA1-211ENST00000472490 KCTD20Q7Z5Y7 419 aa12.06□□□□□ -0.48
BRCA1-211ENST00000472490 CELF2-AS1Q8N7Q2 184 aa12.06□□□□□ -0.48
BRCA1-211ENST00000472490 SPERTQ8NA61 448 aa12.06□□□□□ -0.48
BRCA1-211ENST00000472490 CSNK2A3Q8NEV1 391 aa12.06□□□□□ -0.48
BRCA1-211ENST00000472490 CYGBQ8WWM9 190 aa12.06□□□□□ -0.48
BRCA1-211ENST00000472490 CCL17Q92583 94 aa12.06□□□□□ -0.48
BRCA1-211ENST00000472490 SGK3Q96BR1 496 aa12.06□□□□□ -0.48
BRCA1-211ENST00000472490 TBX5Q99593 518 aa12.06□□□□□ -0.48
BRCA1-211ENST00000472490 VCX3BQ9H321 246 aa12.06□□□□□ -0.48
BRCA1-211ENST00000472490 RNPEPL1Q9HAU8 725 aa12.06□□□□□ -0.48
BRCA1-211ENST00000472490 ZNF275Q9NSD4 429 aaPredicted RBP12.06□□□□□ -0.48
BRCA1-211ENST00000472490 RPL36Q9Y3U8 105 aaKnown RBP12.06□□□□□ -0.48
BRCA1-211ENST00000472490 PLCE1Q9P212 2302 aa12.06□□□□□ -0.48
BRCA1-211ENST00000472490 USF3Q68DE3 2245 aa12.05□□□□□ -0.48
BRCA1-211ENST00000472490 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.05□□□□□ -0.48
BRCA1-211ENST00000472490 A0A0U1RQV5 110 aa12.05□□□□□ -0.48
BRCA1-211ENST00000472490 A0A1B0GWJ7 208 aa12.05□□□□□ -0.48
BRCA1-211ENST00000472490 LOC110117498-PIK3R3F6TDL0 507 aa12.05□□□□□ -0.48
BRCA1-211ENST00000472490 LYNX1G3V0Z9 82 aa12.05□□□□□ -0.48
BRCA1-211ENST00000472490 H0YAE9 185 aa12.05□□□□□ -0.48
BRCA1-211ENST00000472490 DLGAP1O14490 977 aa12.05□□□□□ -0.48
BRCA1-211ENST00000472490 PPIHO43447 177 aaKnown RBP12.05□□□□□ -0.48
BRCA1-211ENST00000472490 RP2O75695 350 aa12.05□□□□□ -0.48
BRCA1-211ENST00000472490 FADS2O95864 444 aaKnown RBP12.05□□□□□ -0.48
BRCA1-211ENST00000472490 TACSTD2P09758 323 aa12.05□□□□□ -0.48
BRCA1-211ENST00000472490 LYNX1P0DP58 116 aa12.05□□□□□ -0.48
BRCA1-211ENST00000472490 GABRB1P18505 474 aa12.05□□□□□ -0.48
BRCA1-211ENST00000472490 FAM3AP98173 230 aa12.05□□□□□ -0.48
BRCA1-211ENST00000472490 OR8G1Q15617 311 aa12.05□□□□□ -0.48
BRCA1-211ENST00000472490 GFOD2Q3B7J2 385 aa12.05□□□□□ -0.48
BRCA1-211ENST00000472490 PLEKHG7Q6ZR37 379 aa12.05□□□□□ -0.48
BRCA1-211ENST00000472490 YIPF7Q8N8F6 280 aa12.05□□□□□ -0.48
BRCA1-211ENST00000472490 OR56B2PQ8NGI1 322 aa12.05□□□□□ -0.48
BRCA1-211ENST00000472490 RAB1CQ92928 201 aa12.05□□□□□ -0.48
BRCA1-211ENST00000472490 YIPF5Q969M3 257 aa12.05□□□□□ -0.48
BRCA1-211ENST00000472490 ERGIC1Q969X5 290 aa12.05□□□□□ -0.48
BRCA1-211ENST00000472490 OR2V2Q96R30 315 aa12.05□□□□□ -0.48
BRCA1-211ENST00000472490 ABCB9Q9NP78 766 aa12.05□□□□□ -0.48
BRCA1-211ENST00000472490 FAM206AQ9NX38 181 aa12.05□□□□□ -0.48
BRCA1-211ENST00000472490 PPP1R3CQ9UQK1 317 aa12.05□□□□□ -0.48
BRCA1-211ENST00000472490 SNX5Q9Y5X3 404 aa12.05□□□□□ -0.48
BRCA1-211ENST00000472490 HSPE1-MOB4S4R3N1 261 aa12.05□□□□□ -0.48
BRCA1-211ENST00000472490 hCG_38984A0A1B0GV85 526 aa12.04□□□□□ -0.48
BRCA1-211ENST00000472490 DAPL1A0PJW8 107 aa12.04□□□□□ -0.48
BRCA1-211ENST00000472490 IRGMA1A4Y4 181 aa12.04□□□□□ -0.48
BRCA1-211ENST00000472490 METTL15A6NJ78 407 aa12.04□□□□□ -0.48
BRCA1-211ENST00000472490 LRRC30A6NM36 301 aa12.04□□□□□ -0.48
BRCA1-211ENST00000472490 MTRF1O75570 445 aaKnown RBP12.04□□□□□ -0.48
BRCA1-211ENST00000472490 APOL3O95236 402 aa12.04□□□□□ -0.48
BRCA1-211ENST00000472490 DBTP11182 482 aaKnown RBP12.04□□□□□ -0.48
BRCA1-211ENST00000472490 ATP6V1B1P15313 513 aa12.04□□□□□ -0.48
BRCA1-211ENST00000472490 CA6P23280 308 aa12.04□□□□□ -0.48
BRCA1-211ENST00000472490 GNALP38405 381 aa12.04□□□□□ -0.48
BRCA1-211ENST00000472490 GSK3AP49840 483 aa12.04□□□□□ -0.48
BRCA1-211ENST00000472490 ACTA2P62736 377 aa12.04□□□□□ -0.48
BRCA1-211ENST00000472490 ACTG2P63267 376 aa12.04□□□□□ -0.48
BRCA1-211ENST00000472490 ZNF91Q05481 1191 aa12.04□□□□□ -0.48
BRCA1-211ENST00000472490 RAB40BQ12829 278 aa12.04□□□□□ -0.48
BRCA1-211ENST00000472490 KLHL22Q53GT1 634 aa12.04□□□□□ -0.48
BRCA1-211ENST00000472490 ZNF691Q5VV52 312 aa12.04□□□□□ -0.48
BRCA1-211ENST00000472490 COMMD2Q86X83 199 aa12.04□□□□□ -0.48
BRCA1-211ENST00000472490 EGFL6Q8IUX8 553 aa12.04□□□□□ -0.48
BRCA1-211ENST00000472490 RFLNBQ8N5W9 214 aa12.04□□□□□ -0.48
BRCA1-211ENST00000472490 ACBD7Q8N6N7 88 aa12.04□□□□□ -0.48
BRCA1-211ENST00000472490 PLPP7Q8NBV4 271 aa12.04□□□□□ -0.48
BRCA1-211ENST00000472490 MAPK1IP1LQ8NDC0 245 aa12.04□□□□□ -0.48
BRCA1-211ENST00000472490 OR10AD1Q8NGE0 317 aa12.04□□□□□ -0.48
BRCA1-211ENST00000472490 OR8B12Q8NGG6 310 aa12.04□□□□□ -0.48
BRCA1-211ENST00000472490 ITLN1Q8WWA0 313 aa12.04□□□□□ -0.48
BRCA1-211ENST00000472490 HPS1Q92902 700 aa12.04□□□□□ -0.48
BRCA1-211ENST00000472490 MEGF10Q96KG7 1140 aa12.04□□□□□ -0.48
BRCA1-211ENST00000472490 ADAT1Q9BUB4 502 aaKnown RBP12.04□□□□□ -0.48
BRCA1-211ENST00000472490 ADI1Q9BV57 179 aa12.04□□□□□ -0.48
BRCA1-211ENST00000472490 TTTY10Q9BZA0 68 aa12.04□□□□□ -0.48
BRCA1-211ENST00000472490 PBOV1Q9GZY1 135 aa12.04□□□□□ -0.48
BRCA1-211ENST00000472490 INPP5EQ9NRR6 644 aa12.04□□□□□ -0.48
BRCA1-211ENST00000472490 C14orf119Q9NWQ9 140 aa12.04□□□□□ -0.48
BRCA1-211ENST00000472490 NUFIP1Q9UHK0 495 aaKnown RBP12.04□□□□□ -0.48
BRCA1-211ENST00000472490 MRM2Q9UI43 246 aaKnown RBP12.04□□□□□ -0.48
BRCA1-211ENST00000472490 GTF2A1LQ9UNN4 478 aa12.04□□□□□ -0.48
BRCA1-211ENST00000472490 EXOGQ9Y2C4 368 aaKnown RBP12.04□□□□□ -0.48
BRCA1-211ENST00000472490 R4GMQ9 66 aa12.04□□□□□ -0.48
BRCA1-211ENST00000472490 A0A096LNT2 108 aa12.03□□□□□ -0.48
BRCA1-211ENST00000472490 C5orf63A6NC05 138 aa12.03□□□□□ -0.48
BRCA1-211ENST00000472490 MLNRO43193 412 aa12.03□□□□□ -0.48
BRCA1-211ENST00000472490 LILRA1O75019 489 aa12.03□□□□□ -0.48
BRCA1-211ENST00000472490 IRF2P14316 349 aa12.03□□□□□ -0.48
BRCA1-211ENST00000472490 CAPGP40121 348 aa12.03□□□□□ -0.48
BRCA1-211ENST00000472490 MAP2K3P46734 347 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms