RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 H1F0P07305 194 aaKnown RBP7.54□□□□□ -1.2
CPSF4-211ENST00000471455 CSF1P09603 554 aa7.54□□□□□ -1.2
CPSF4-211ENST00000471455 ACSM4P0C7M7 580 aa7.54□□□□□ -1.2
CPSF4-211ENST00000471455 TROVE2P10155 538 aaKnown RBP eCLIP7.54□□□□□ -1.2
CPSF4-211ENST00000471455 GRK5P34947 590 aa7.54□□□□□ -1.2
CPSF4-211ENST00000471455 GGT2P36268 569 aa7.54□□□□□ -1.2
CPSF4-211ENST00000471455 PMELP40967 661 aa7.54□□□□□ -1.2
CPSF4-211ENST00000471455 IER3P46695 156 aa7.54□□□□□ -1.2
CPSF4-211ENST00000471455 TRAP1Q12931 704 aaKnown RBP7.54□□□□□ -1.2
CPSF4-211ENST00000471455 C11orf88Q6PI97 169 aa7.54□□□□□ -1.2
CPSF4-211ENST00000471455 HDXQ7Z353 690 aa7.54□□□□□ -1.2
CPSF4-211ENST00000471455 REC114Q7Z4M0 266 aa7.54□□□□□ -1.2
CPSF4-211ENST00000471455 VTCN1Q7Z7D3 282 aa7.54□□□□□ -1.2
CPSF4-211ENST00000471455 BOLLQ8N9W6 283 aaKnown RBP7.54□□□□□ -1.2
CPSF4-211ENST00000471455 ZSCAN4Q8NAM6 433 aaPredicted RBP7.54□□□□□ -1.2
CPSF4-211ENST00000471455 OR4C15Q8NGM1 316 aa7.54□□□□□ -1.2
CPSF4-211ENST00000471455 OR5R1Q8NH85 324 aa7.54□□□□□ -1.2
CPSF4-211ENST00000471455 SLCO4A1Q96BD0 722 aa7.54□□□□□ -1.2
CPSF4-211ENST00000471455 RSRC1Q96IZ7 334 aaKnown RBP7.54□□□□□ -1.2
CPSF4-211ENST00000471455 SIRPDQ9H106 197 aa7.54□□□□□ -1.2
CPSF4-211ENST00000471455 C16orf95Q9H693 158 aa7.54□□□□□ -1.2
CPSF4-211ENST00000471455 C14orf119Q9NWQ9 140 aa7.54□□□□□ -1.2
CPSF4-211ENST00000471455 MRPL15Q9P015 296 aaKnown RBP7.54□□□□□ -1.2
CPSF4-211ENST00000471455 CTSZQ9UBR2 303 aa7.54□□□□□ -1.2
CPSF4-211ENST00000471455 VPREB3Q9UKI3 123 aa7.54□□□□□ -1.2
CPSF4-211ENST00000471455 SIGLEC7Q9Y286 467 aa7.54□□□□□ -1.2
CPSF4-211ENST00000471455 IER3IP1Q9Y5U9 82 aa7.54□□□□□ -1.2
CPSF4-211ENST00000471455 LHFPL6Q9Y693 200 aa7.54□□□□□ -1.2
CPSF4-211ENST00000471455 A0A0U1RQK1 487 aa7.53□□□□□ -1.2
CPSF4-211ENST00000471455 KRTAP9-6A0A140TA67 174 aa7.53□□□□□ -1.2
CPSF4-211ENST00000471455 hCG_1807616A0A1W2PRN6 198 aa7.53□□□□□ -1.2
CPSF4-211ENST00000471455 A0A1W2PRQ8 180 aa7.53□□□□□ -1.2
CPSF4-211ENST00000471455 GGT3PA6NGU5 568 aa7.53□□□□□ -1.2
CPSF4-211ENST00000471455 UNC119BA6NIH7 251 aa7.53□□□□□ -1.2
CPSF4-211ENST00000471455 CD300LBA8K4G0 201 aa7.53□□□□□ -1.2
CPSF4-211ENST00000471455 J3KTA2 159 aa7.53□□□□□ -1.2
CPSF4-211ENST00000471455 M0R135 149 aa7.53□□□□□ -1.2
CPSF4-211ENST00000471455 CXCR6O00574 342 aa7.53□□□□□ -1.2
CPSF4-211ENST00000471455 IMPA2O14732 288 aa7.53□□□□□ -1.2
CPSF4-211ENST00000471455 FFAR1O14842 300 aa7.53□□□□□ -1.2
CPSF4-211ENST00000471455 PTBP3O95758 552 aaKnown RBP7.53□□□□□ -1.2
CPSF4-211ENST00000471455 TSPAN15O95858 294 aa7.53□□□□□ -1.2
CPSF4-211ENST00000471455 PAHP00439 452 aa7.53□□□□□ -1.2
CPSF4-211ENST00000471455 HLA-DQA2P01906 255 aa7.53□□□□□ -1.2
CPSF4-211ENST00000471455 CA6P23280 308 aa7.53□□□□□ -1.2
CPSF4-211ENST00000471455 SLC6A6P31641 620 aa7.53□□□□□ -1.2
CPSF4-211ENST00000471455 TGFBR2P37173 567 aa7.53□□□□□ -1.2
CPSF4-211ENST00000471455 MDH1P40925 334 aaKnown RBP7.53□□□□□ -1.2
CPSF4-211ENST00000471455 KLF10Q13118 480 aa7.53□□□□□ -1.2
CPSF4-211ENST00000471455 DGCR6Q14129 220 aa7.53□□□□□ -1.2
CPSF4-211ENST00000471455 MPPED2Q15777 294 aa7.53□□□□□ -1.2
CPSF4-211ENST00000471455 KRTAP27-1Q3LI81 207 aa7.53□□□□□ -1.2
CPSF4-211ENST00000471455 CDONQ4KMG0 1287 aa7.53□□□□□ -1.2
CPSF4-211ENST00000471455 FBLN7Q53RD9 439 aa7.53□□□□□ -1.2
CPSF4-211ENST00000471455 FGD3Q5JSP0 725 aa7.53□□□□□ -1.2
CPSF4-211ENST00000471455 OTPQ5XKR4 325 aa7.53□□□□□ -1.2
CPSF4-211ENST00000471455 SFRP4Q6FHJ7 346 aaPredicted RBP7.53□□□□□ -1.2
CPSF4-211ENST00000471455 CORO6Q6QEF8 472 aa7.53□□□□□ -1.2
CPSF4-211ENST00000471455 TBPL2Q6SJ96 375 aa7.53□□□□□ -1.2
CPSF4-211ENST00000471455 SMARCD3Q6STE5 483 aa7.53□□□□□ -1.2
CPSF4-211ENST00000471455 Q6ZTK2 550 aa7.53□□□□□ -1.2
CPSF4-211ENST00000471455 BTN2A1Q7KYR7 527 aa7.53□□□□□ -1.2
CPSF4-211ENST00000471455 C1QL4Q86Z23 238 aa7.53□□□□□ -1.2
CPSF4-211ENST00000471455 DTX3Q8N9I9 347 aa7.53□□□□□ -1.2
CPSF4-211ENST00000471455 C19orf18Q8NEA5 215 aa7.53□□□□□ -1.2
CPSF4-211ENST00000471455 SLC26A10Q8NG04 563 aa7.53□□□□□ -1.2
CPSF4-211ENST00000471455 FAM110DQ8TAY7 271 aaPredicted RBP7.53□□□□□ -1.2
CPSF4-211ENST00000471455 FANK1Q8TC84 345 aa7.53□□□□□ -1.2
CPSF4-211ENST00000471455 SLC7A13Q8TCU3 470 aa7.53□□□□□ -1.2
CPSF4-211ENST00000471455 ST8SIA4Q92187 359 aa7.53□□□□□ -1.2
CPSF4-211ENST00000471455 ZNF799Q96GE5 643 aa7.53□□□□□ -1.2
CPSF4-211ENST00000471455 CNTD2Q9H8S5 307 aa7.53□□□□□ -1.2
CPSF4-211ENST00000471455 C1orf123Q9NWV4 160 aa7.53□□□□□ -1.2
CPSF4-211ENST00000471455 KAAG1Q9UBP8 84 aa7.53□□□□□ -1.2
CPSF4-211ENST00000471455 SNX13Q9Y5W8 968 aa7.53□□□□□ -1.2
CPSF4-211ENST00000471455 CAPN7Q9Y6W3 813 aa7.53□□□□□ -1.2
CPSF4-211ENST00000471455 ENPP4Q9Y6X5 453 aa7.53□□□□□ -1.2
CPSF4-211ENST00000471455 IGLV1-36A0A0B4J1U3 117 aa7.52□□□□□ -1.21
CPSF4-211ENST00000471455 ANKRD61A6NGH8 418 aa7.52□□□□□ -1.21
CPSF4-211ENST00000471455 DVL1O14640 695 aa7.52□□□□□ -1.21
CPSF4-211ENST00000471455 SLC22A2O15244 555 aa7.52□□□□□ -1.21
CPSF4-211ENST00000471455 OR10H3O60404 316 aa7.52□□□□□ -1.21
CPSF4-211ENST00000471455 PTP4A3O75365 173 aa7.52□□□□□ -1.21
CPSF4-211ENST00000471455 TSPAN9O75954 239 aa7.52□□□□□ -1.21
CPSF4-211ENST00000471455 PPP1R3DO95685 299 aa7.52□□□□□ -1.21
CPSF4-211ENST00000471455 SERPINA1P01009 418 aa7.52□□□□□ -1.21
CPSF4-211ENST00000471455 MUC1P15941 1255 aaPredicted RBP7.52□□□□□ -1.21
CPSF4-211ENST00000471455 ZNF823P16415 610 aa7.52□□□□□ -1.21
CPSF4-211ENST00000471455 ZNF26P17031 533 aaPredicted RBP7.52□□□□□ -1.21
CPSF4-211ENST00000471455 KRTAP10-3P60369 221 aa7.52□□□□□ -1.21
CPSF4-211ENST00000471455 ARF6P62330 175 aa7.52□□□□□ -1.21
CPSF4-211ENST00000471455 KRT72Q14CN4 511 aa7.52□□□□□ -1.21
CPSF4-211ENST00000471455 MEP1BQ16820 701 aa7.52□□□□□ -1.21
CPSF4-211ENST00000471455 MICBQ29980 383 aa7.52□□□□□ -1.21
CPSF4-211ENST00000471455 SLC18B1Q6NT16 456 aa7.52□□□□□ -1.21
CPSF4-211ENST00000471455 METAP1DQ6UB28 335 aaPredicted RBP7.52□□□□□ -1.21
CPSF4-211ENST00000471455 DRAM2Q6UX65 266 aa7.52□□□□□ -1.21
CPSF4-211ENST00000471455 CFAP77Q6ZQR2 320 aa7.52□□□□□ -1.21
CPSF4-211ENST00000471455 Q6ZSV7 163 aa7.52□□□□□ -1.21
CPSF4-211ENST00000471455 PTCHD4Q6ZW05 846 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms