RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 OTULINQ96BN8 352 aa12.81□□□□□ -0.36
COL1A1-203ENST00000471344 NEIL1Q96FI4 390 aaPredicted RBP12.81□□□□□ -0.36
COL1A1-203ENST00000471344 KCNJ15Q99712 375 aa12.81□□□□□ -0.36
COL1A1-203ENST00000471344 MRI1Q9BV20 369 aa12.81□□□□□ -0.36
COL1A1-203ENST00000471344 CTSZQ9UBR2 303 aa12.81□□□□□ -0.36
COL1A1-203ENST00000471344 MIOXQ9UGB7 285 aa12.81□□□□□ -0.36
COL1A1-203ENST00000471344 NUP50Q9UKX7 468 aa12.81□□□□□ -0.36
COL1A1-203ENST00000471344 BAIAP2Q9UQB8 552 aa12.81□□□□□ -0.36
COL1A1-203ENST00000471344 TMEM89A2RUT3 159 aa12.8□□□□□ -0.36
COL1A1-203ENST00000471344 C22orf46C9J442 243 aa12.8□□□□□ -0.36
COL1A1-203ENST00000471344 ZNF878C9JN71 531 aa12.8□□□□□ -0.36
COL1A1-203ENST00000471344 C3orf80F5H4A9 247 aa12.8□□□□□ -0.36
COL1A1-203ENST00000471344 H3BN98 237 aa12.8□□□□□ -0.36
COL1A1-203ENST00000471344 GSC2O15499 205 aa12.8□□□□□ -0.36
COL1A1-203ENST00000471344 DNAJC8O75937 253 aaPredicted RBP12.8□□□□□ -0.36
COL1A1-203ENST00000471344 IFNGP01579 166 aa12.8□□□□□ -0.36
COL1A1-203ENST00000471344 ZNF3P17036 446 aa12.8□□□□□ -0.36
COL1A1-203ENST00000471344 CX3CR1P49238 355 aa12.8□□□□□ -0.36
COL1A1-203ENST00000471344 GK3PQ14409 553 aa12.8□□□□□ -0.36
COL1A1-203ENST00000471344 TAF13Q15543 124 aa12.8□□□□□ -0.36
COL1A1-203ENST00000471344 DNAL1Q4LDG9 190 aa12.8□□□□□ -0.36
COL1A1-203ENST00000471344 TEX30Q5JUR7 227 aa12.8□□□□□ -0.36
COL1A1-203ENST00000471344 CD300LDQ6UXZ3 194 aa12.8□□□□□ -0.36
COL1A1-203ENST00000471344 ZNF841Q6ZN19 808 aa12.8□□□□□ -0.36
COL1A1-203ENST00000471344 C1orf87Q8N0U7 546 aa12.8□□□□□ -0.36
COL1A1-203ENST00000471344 CELF2-AS1Q8N7Q2 184 aa12.8□□□□□ -0.36
COL1A1-203ENST00000471344 OR8B3Q8NGG8 313 aa12.8□□□□□ -0.36
COL1A1-203ENST00000471344 TEX47Q8TBZ9 253 aa12.8□□□□□ -0.36
COL1A1-203ENST00000471344 GIPC3Q8TF64 312 aa12.8□□□□□ -0.36
COL1A1-203ENST00000471344 TAF15Q92804 592 aaKnown RBP eCLIP12.8□□□□□ -0.36
COL1A1-203ENST00000471344 GCDHQ92947 438 aaPredicted RBP12.8□□□□□ -0.36
COL1A1-203ENST00000471344 LRGUKQ96M69 825 aa12.8□□□□□ -0.36
COL1A1-203ENST00000471344 OR8B2Q96RD0 313 aa12.8□□□□□ -0.36
COL1A1-203ENST00000471344 DNAJC27Q9NZQ0 273 aa12.8□□□□□ -0.36
COL1A1-203ENST00000471344 ZNF319Q9P2F9 582 aa12.8□□□□□ -0.36
COL1A1-203ENST00000471344 MDFIC2A0A1B0GVS7 189 aa12.79□□□□□ -0.36
COL1A1-203ENST00000471344 DNAJC9-AS1A6NH13 148 aa12.79□□□□□ -0.36
COL1A1-203ENST00000471344 TBX1O43435 398 aa12.79□□□□□ -0.36
COL1A1-203ENST00000471344 FCN3O75636 299 aa12.79□□□□□ -0.36
COL1A1-203ENST00000471344 PTBP3O95758 552 aaKnown RBP12.79□□□□□ -0.36
COL1A1-203ENST00000471344 ANXA2P07355 339 aaKnown RBP12.79□□□□□ -0.36
COL1A1-203ENST00000471344 IRF2P14316 349 aa12.79□□□□□ -0.36
COL1A1-203ENST00000471344 FPR2P25090 351 aa12.79□□□□□ -0.36
COL1A1-203ENST00000471344 POU1F1P28069 291 aa12.79□□□□□ -0.36
COL1A1-203ENST00000471344 GSTT1P30711 240 aa12.79□□□□□ -0.36
COL1A1-203ENST00000471344 GRK5P34947 590 aa12.79□□□□□ -0.36
COL1A1-203ENST00000471344 COMPP49747 757 aaPredicted RBP12.79□□□□□ -0.36
COL1A1-203ENST00000471344 ELF3P78545 371 aaPredicted RBP12.79□□□□□ -0.36
COL1A1-203ENST00000471344 KLHL12Q53G59 568 aa12.79□□□□□ -0.36
COL1A1-203ENST00000471344 WDR25Q64LD2 544 aaPredicted RBP12.79□□□□□ -0.36
COL1A1-203ENST00000471344 DOK3Q7L591 496 aa12.79□□□□□ -0.36
COL1A1-203ENST00000471344 PRSS45Q7RTY3 260 aa12.79□□□□□ -0.36
COL1A1-203ENST00000471344 WDR86Q86TI4 376 aa12.79□□□□□ -0.36
COL1A1-203ENST00000471344 TIGD4Q8IY51 512 aa12.79□□□□□ -0.36
COL1A1-203ENST00000471344 PARP8Q8N3A8 854 aa12.79□□□□□ -0.36
COL1A1-203ENST00000471344 OR11L1Q8NGX0 322 aa12.79□□□□□ -0.36
COL1A1-203ENST00000471344 RAB40AQ8WXH6 277 aa12.79□□□□□ -0.36
COL1A1-203ENST00000471344 ZMYND19Q96E35 227 aaPredicted RBP12.79□□□□□ -0.36
COL1A1-203ENST00000471344 JMJD8Q96S16 334 aa12.79□□□□□ -0.36
COL1A1-203ENST00000471344 INTS14Q96SY0 518 aa12.79□□□□□ -0.36
COL1A1-203ENST00000471344 ABHD6Q9BV23 337 aa12.79□□□□□ -0.36
COL1A1-203ENST00000471344 MMADHCQ9H3L0 296 aaPredicted RBP12.79□□□□□ -0.36
COL1A1-203ENST00000471344 SMURF1Q9HCE7 757 aa12.79□□□□□ -0.36
COL1A1-203ENST00000471344 C1orf123Q9NWV4 160 aa12.79□□□□□ -0.36
COL1A1-203ENST00000471344 PDP1Q9P0J1 537 aaPredicted RBP12.79□□□□□ -0.36
COL1A1-203ENST00000471344 POMPQ9Y244 141 aa12.79□□□□□ -0.36
COL1A1-203ENST00000471344 KLHDC2Q9Y2U9 406 aa12.79□□□□□ -0.36
COL1A1-203ENST00000471344 DOCK11Q5JSL3 2073 aa12.79□□□□□ -0.36
COL1A1-203ENST00000471344 TRAV40A0A0B4J280 105 aa12.78□□□□□ -0.36
COL1A1-203ENST00000471344 SELENOFO60613 162 aa12.78□□□□□ -0.36
COL1A1-203ENST00000471344 GRPP07492 148 aa12.78□□□□□ -0.36
COL1A1-203ENST00000471344 EGR1P18146 543 aa12.78□□□□□ -0.36
COL1A1-203ENST00000471344 PRKACGP22612 351 aa12.78□□□□□ -0.36
COL1A1-203ENST00000471344 PSMB10P40306 273 aa12.78□□□□□ -0.36
COL1A1-203ENST00000471344 ZNF121P58317 390 aaPredicted RBP12.78□□□□□ -0.36
COL1A1-203ENST00000471344 FAM3AP98173 230 aa12.78□□□□□ -0.36
COL1A1-203ENST00000471344 POU4F2Q12837 409 aa12.78□□□□□ -0.36
COL1A1-203ENST00000471344 GFOD2Q3B7J2 385 aa12.78□□□□□ -0.36
COL1A1-203ENST00000471344 PLBD1Q6P4A8 553 aa12.78□□□□□ -0.36
COL1A1-203ENST00000471344 DCDC5Q6ZRR9 648 aa12.78□□□□□ -0.36
COL1A1-203ENST00000471344 FAM57BQ71RH2 274 aa12.78□□□□□ -0.36
COL1A1-203ENST00000471344 SLC16A9Q7RTY1 509 aa12.78□□□□□ -0.36
COL1A1-203ENST00000471344 BBS1Q8NFJ9 593 aa12.78□□□□□ -0.36
COL1A1-203ENST00000471344 RNF133Q8WVZ7 376 aa12.78□□□□□ -0.36
COL1A1-203ENST00000471344 UTP4Q969X6 686 aaKnown RBP12.78□□□□□ -0.36
COL1A1-203ENST00000471344 SPSB4Q96A44 273 aa12.78□□□□□ -0.36
COL1A1-203ENST00000471344 NUDT16L1Q9BRJ7 211 aaKnown RBP12.78□□□□□ -0.36
COL1A1-203ENST00000471344 OR51V1Q9H2C8 321 aa12.78□□□□□ -0.36
COL1A1-203ENST00000471344 MARCH7Q9H992 704 aa12.78□□□□□ -0.36
COL1A1-203ENST00000471344 FN3KRPQ9HA64 309 aa12.78□□□□□ -0.36
COL1A1-203ENST00000471344 BRD7Q9NPI1 651 aa12.78□□□□□ -0.36
COL1A1-203ENST00000471344 MRPL15Q9P015 296 aaKnown RBP12.78□□□□□ -0.36
COL1A1-203ENST00000471344 RNF7Q9UBF6 113 aa12.78□□□□□ -0.36
COL1A1-203ENST00000471344 CLN8Q9UBY8 286 aa12.78□□□□□ -0.36
COL1A1-203ENST00000471344 IGHV3OR15-7A0A075B7D8 119 aa12.77□□□□□ -0.37
COL1A1-203ENST00000471344 A0A1B0GW55 424 aa12.77□□□□□ -0.37
COL1A1-203ENST00000471344 ARRDC5A6NEK1 342 aa12.77□□□□□ -0.37
COL1A1-203ENST00000471344 A6NLC8 198 aa12.77□□□□□ -0.37
COL1A1-203ENST00000471344 XRCC2O43543 280 aa12.77□□□□□ -0.37
COL1A1-203ENST00000471344 GMDSO60547 372 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms