RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 ARPC3O15145 178 aa11.46□□□□□ -0.57
HMGN1-211ENST00000471260 MAGEB3O15480 346 aa11.46□□□□□ -0.57
HMGN1-211ENST00000471260 SPRY3O43610 288 aa11.46□□□□□ -0.57
HMGN1-211ENST00000471260 KITLGP21583 273 aa11.46□□□□□ -0.57
HMGN1-211ENST00000471260 FPR3P25089 353 aa11.46□□□□□ -0.57
HMGN1-211ENST00000471260 RGS6P49758 472 aa11.46□□□□□ -0.57
HMGN1-211ENST00000471260 FXYD6P3P58550 94 aa11.46□□□□□ -0.57
HMGN1-211ENST00000471260 GLO1Q04760 184 aa11.46□□□□□ -0.57
HMGN1-211ENST00000471260 SMN1Q16637 294 aaKnown RBP11.46□□□□□ -0.57
HMGN1-211ENST00000471260 ZNF770Q6IQ21 691 aaPredicted RBP11.46□□□□□ -0.57
HMGN1-211ENST00000471260 PLEKHG7Q6ZR37 379 aa11.46□□□□□ -0.57
HMGN1-211ENST00000471260 PEG10Q86TG7 708 aaKnown RBP11.46□□□□□ -0.57
HMGN1-211ENST00000471260 GJC3Q8NFK1 279 aa11.46□□□□□ -0.57
HMGN1-211ENST00000471260 OR52J3Q8NH60 311 aa11.46□□□□□ -0.57
HMGN1-211ENST00000471260 NUAK2Q9H093 628 aa11.46□□□□□ -0.57
HMGN1-211ENST00000471260 NARFLQ9H6Q4 476 aa11.46□□□□□ -0.57
HMGN1-211ENST00000471260 HIF1ANQ9NWT6 349 aa11.46□□□□□ -0.57
HMGN1-211ENST00000471260 TREM2Q9NZC2 230 aa11.46□□□□□ -0.57
HMGN1-211ENST00000471260 ASH2LQ9UBL3 628 aa11.46□□□□□ -0.57
HMGN1-211ENST00000471260 COA3Q9Y2R0 106 aaPredicted RBP11.46□□□□□ -0.57
HMGN1-211ENST00000471260 WIPI2Q9Y4P8 454 aa11.46□□□□□ -0.57
HMGN1-211ENST00000471260 PEX16Q9Y5Y5 336 aa11.46□□□□□ -0.57
HMGN1-211ENST00000471260 MXRA5Q9NR99 2828 aa11.45□□□□□ -0.58
HMGN1-211ENST00000471260 OR6C6A6NF89 314 aa11.45□□□□□ -0.58
HMGN1-211ENST00000471260 TCF21O43680 179 aa11.45□□□□□ -0.58
HMGN1-211ENST00000471260 IDH3BO43837 385 aa11.45□□□□□ -0.58
HMGN1-211ENST00000471260 TIMM8AO60220 97 aaPredicted RBP11.45□□□□□ -0.58
HMGN1-211ENST00000471260 PTTG1O95997 202 aa11.45□□□□□ -0.58
HMGN1-211ENST00000471260 OSMP13725 252 aa11.45□□□□□ -0.58
HMGN1-211ENST00000471260 TNFSF4P23510 183 aa11.45□□□□□ -0.58
HMGN1-211ENST00000471260 EPHA2P29317 976 aa11.45□□□□□ -0.58
HMGN1-211ENST00000471260 SLC6A6P31641 620 aa11.45□□□□□ -0.58
HMGN1-211ENST00000471260 SOX6P35712 828 aa11.45□□□□□ -0.58
HMGN1-211ENST00000471260 CDKN2AP42771 156 aaKnown RBP11.45□□□□□ -0.58
HMGN1-211ENST00000471260 SLC15A1P46059 708 aa11.45□□□□□ -0.58
HMGN1-211ENST00000471260 CRISP1P54107 249 aa11.45□□□□□ -0.58
HMGN1-211ENST00000471260 VBP1P61758 197 aa11.45□□□□□ -0.58
HMGN1-211ENST00000471260 NCS1P62166 190 aa11.45□□□□□ -0.58
HMGN1-211ENST00000471260 PSG7Q13046 419 aa11.45□□□□□ -0.58
HMGN1-211ENST00000471260 KRTAP24-1Q3LI83 254 aa11.45□□□□□ -0.58
HMGN1-211ENST00000471260 TMEM255AQ5JRV8 349 aa11.45□□□□□ -0.58
HMGN1-211ENST00000471260 SLX4IPQ5VYV7 408 aa11.45□□□□□ -0.58
HMGN1-211ENST00000471260 C1orf94Q6P1W5 598 aa11.45□□□□□ -0.58
HMGN1-211ENST00000471260 CD300LDQ6UXZ3 194 aa11.45□□□□□ -0.58
HMGN1-211ENST00000471260 PTCHD4Q6ZW05 846 aa11.45□□□□□ -0.58
HMGN1-211ENST00000471260 ZBTB8BQ8NAP8 495 aaPredicted RBP11.45□□□□□ -0.58
HMGN1-211ENST00000471260 OR1F12Q8NHA8 337 aa11.45□□□□□ -0.58
HMGN1-211ENST00000471260 FANK1Q8TC84 345 aa11.45□□□□□ -0.58
HMGN1-211ENST00000471260 CCL17Q92583 94 aa11.45□□□□□ -0.58
HMGN1-211ENST00000471260 GTF3AQ92664 365 aaKnown RBP11.45□□□□□ -0.58
HMGN1-211ENST00000471260 GGHQ92820 318 aa11.45□□□□□ -0.58
HMGN1-211ENST00000471260 PTP4A1Q93096 173 aa11.45□□□□□ -0.58
HMGN1-211ENST00000471260 ITFG2Q969R8 447 aa11.45□□□□□ -0.58
HMGN1-211ENST00000471260 HAVCR1Q96D42 359 aa11.45□□□□□ -0.58
HMGN1-211ENST00000471260 SAMD8Q96LT4 415 aa11.45□□□□□ -0.58
HMGN1-211ENST00000471260 ERMAPQ96PL5 475 aaPredicted RBP11.45□□□□□ -0.58
HMGN1-211ENST00000471260 GPA33Q99795 319 aa11.45□□□□□ -0.58
HMGN1-211ENST00000471260 OR52D1Q9H346 318 aa11.45□□□□□ -0.58
HMGN1-211ENST00000471260 ZNF665Q9H7R5 613 aa11.45□□□□□ -0.58
HMGN1-211ENST00000471260 IL20RAQ9UHF4 553 aa11.45□□□□□ -0.58
HMGN1-211ENST00000471260 METRNQ9UJH8 293 aa11.45□□□□□ -0.58
HMGN1-211ENST00000471260 PURGQ9UJV8 347 aaKnown RBP11.45□□□□□ -0.58
HMGN1-211ENST00000471260 A0A0A6YYJ9 748 aa11.44□□□□□ -0.58
HMGN1-211ENST00000471260 ZSCAN5BA6NJL1 495 aa11.44□□□□□ -0.58
HMGN1-211ENST00000471260 OR10H3O60404 316 aa11.44□□□□□ -0.58
HMGN1-211ENST00000471260 UPK1BO75841 260 aa11.44□□□□□ -0.58
HMGN1-211ENST00000471260 RENP00797 406 aa11.44□□□□□ -0.58
HMGN1-211ENST00000471260 RAC2P15153 192 aa11.44□□□□□ -0.58
HMGN1-211ENST00000471260 TNFRSF1AP19438 455 aa11.44□□□□□ -0.58
HMGN1-211ENST00000471260 GATA3P23771 443 aa11.44□□□□□ -0.58
HMGN1-211ENST00000471260 S100A5P33763 92 aa11.44□□□□□ -0.58
HMGN1-211ENST00000471260 HIST1H3AP68431 136 aa11.44□□□□□ -0.58
HMGN1-211ENST00000471260 TNFAIP6P98066 277 aaPredicted RBP11.44□□□□□ -0.58
HMGN1-211ENST00000471260 COX10Q12887 443 aa11.44□□□□□ -0.58
HMGN1-211ENST00000471260 CCDC92Q53HC0 331 aaPredicted RBP11.44□□□□□ -0.58
HMGN1-211ENST00000471260 SLC25A30Q5SVS4 291 aa11.44□□□□□ -0.58
HMGN1-211ENST00000471260 HIST2H3PS2Q5TEC6 136 aa11.44□□□□□ -0.58
HMGN1-211ENST00000471260 C12orf73Q69YU5 71 aa11.44□□□□□ -0.58
HMGN1-211ENST00000471260 HIST2H3AQ71DI3 136 aa11.44□□□□□ -0.58
HMGN1-211ENST00000471260 JAZF1Q86VZ6 243 aa11.44□□□□□ -0.58
HMGN1-211ENST00000471260 AQP11Q8NBQ7 271 aa11.44□□□□□ -0.58
HMGN1-211ENST00000471260 OR5L1Q8NGL2 311 aa11.44□□□□□ -0.58
HMGN1-211ENST00000471260 GNPDA2Q8TDQ7 276 aa11.44□□□□□ -0.58
HMGN1-211ENST00000471260 COQ7Q99807 217 aa11.44□□□□□ -0.58
HMGN1-211ENST00000471260 NIPSNAP1Q9BPW8 284 aa11.44□□□□□ -0.58
HMGN1-211ENST00000471260 HDHD2Q9H0R4 259 aa11.44□□□□□ -0.58
HMGN1-211ENST00000471260 RERGLQ9H628 205 aa11.44□□□□□ -0.58
HMGN1-211ENST00000471260 MSL2Q9HCI7 577 aa11.44□□□□□ -0.58
HMGN1-211ENST00000471260 IL19Q9UHD0 177 aa11.44□□□□□ -0.58
HMGN1-211ENST00000471260 POLR1DQ9Y2S0 133 aa11.44□□□□□ -0.58
HMGN1-211ENST00000471260 IGLV1-36A0A0B4J1U3 117 aa11.43□□□□□ -0.58
HMGN1-211ENST00000471260 CCRL2O00421 344 aa11.43□□□□□ -0.58
HMGN1-211ENST00000471260 RER1O15258 196 aa11.43□□□□□ -0.58
HMGN1-211ENST00000471260 SURF4O15260 269 aa11.43□□□□□ -0.58
HMGN1-211ENST00000471260 MPZL1O95297 269 aa11.43□□□□□ -0.58
HMGN1-211ENST00000471260 PPP1R3DO95685 299 aa11.43□□□□□ -0.58
HMGN1-211ENST00000471260 PNPP00491 289 aa11.43□□□□□ -0.58
HMGN1-211ENST00000471260 IGHV2-5P01817 119 aa11.43□□□□□ -0.58
HMGN1-211ENST00000471260 NOS3P29474 1203 aa11.43□□□□□ -0.58
HMGN1-211ENST00000471260 GSSP48637 474 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms