RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 ZNF573Q86YE8 665 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 Q8NFD4 153 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 OR13D1Q8NGV5 346 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 OR1P1Q8NH06 330 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 FAM46BQ96A09 425 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 CCDC74AQ96AQ1 378 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 TMEM18Q96B42 140 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 HHIPL1Q96JK4 782 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 OR10C1Q96KK4 312 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 STACQ99469 402 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 ARHGDIGQ99819 225 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 CABLES2Q9BTV7 478 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 TM7SF3Q9NS93 570 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 KLK13Q9UKR3 277 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 SIGLEC7Q9Y286 467 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 CNTRLQ7Z7A1 2325 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 LOC102724200A0A096LPH7 203 aaPredicted RBP3.78□□□□□ -1.8
VPS50-210ENST00000471188 SMIM35A0A1B0GVV1 85 aa3.78□□□□□ -1.8
VPS50-210ENST00000471188 ANKUB1A6NFN9 424 aa3.78□□□□□ -1.8
VPS50-210ENST00000471188 A6NIZ1 184 aa3.78□□□□□ -1.8
VPS50-210ENST00000471188 OR4C45A6NMZ5 311 aa3.78□□□□□ -1.8
VPS50-210ENST00000471188 A8MXE2 369 aa3.78□□□□□ -1.8
VPS50-210ENST00000471188 ITGB1BP1O14713 200 aa3.78□□□□□ -1.8
VPS50-210ENST00000471188 KLF4O43474 513 aa3.78□□□□□ -1.8
VPS50-210ENST00000471188 SOCS5O75159 536 aa3.78□□□□□ -1.8
VPS50-210ENST00000471188 GJB5O95377 273 aa3.78□□□□□ -1.8
VPS50-210ENST00000471188 CD160O95971 181 aa3.78□□□□□ -1.8
VPS50-210ENST00000471188 IGHEP01854 428 aa3.78□□□□□ -1.8
VPS50-210ENST00000471188 ZNF735P0CB33 412 aa3.78□□□□□ -1.8
VPS50-210ENST00000471188 ZNF888P0CJ79 500 aaPredicted RBP3.78□□□□□ -1.8
VPS50-210ENST00000471188 FGF5P12034 268 aa3.78□□□□□ -1.8
VPS50-210ENST00000471188 ARRB1P49407 418 aaPredicted RBP3.78□□□□□ -1.8
VPS50-210ENST00000471188 UCP3P55916 312 aa3.78□□□□□ -1.8
VPS50-210ENST00000471188 RAP1BP61224 184 aa3.78□□□□□ -1.8
VPS50-210ENST00000471188 CXCL9Q07325 125 aa3.78□□□□□ -1.8
VPS50-210ENST00000471188 PMPCAQ10713 525 aa3.78□□□□□ -1.8
VPS50-210ENST00000471188 OR1Q1Q15612 314 aa3.78□□□□□ -1.8
VPS50-210ENST00000471188 XP32Q5T750 250 aa3.78□□□□□ -1.8
VPS50-210ENST00000471188 OTPQ5XKR4 325 aa3.78□□□□□ -1.8
VPS50-210ENST00000471188 ABLIM2Q6H8Q1 611 aa3.78□□□□□ -1.8
VPS50-210ENST00000471188 C16orf54Q6UWD8 224 aa3.78□□□□□ -1.8
VPS50-210ENST00000471188 FAM180AQ6UWF9 173 aa3.78□□□□□ -1.8
VPS50-210ENST00000471188 ZNF66Q6ZN08 573 aa3.78□□□□□ -1.8
VPS50-210ENST00000471188 TPRG1Q6ZUI0 275 aa3.78□□□□□ -1.8
VPS50-210ENST00000471188 TMCO2Q7Z6W1 182 aaPredicted RBP3.78□□□□□ -1.8
VPS50-210ENST00000471188 RTN4RL1Q86UN2 441 aaPredicted RBP3.78□□□□□ -1.8
VPS50-210ENST00000471188 CSNK1A1LQ8N752 337 aa3.78□□□□□ -1.8
VPS50-210ENST00000471188 ZNF321PQ8N8H1 164 aa3.78□□□□□ -1.8
VPS50-210ENST00000471188 NECAP1Q8NC96 275 aa3.78□□□□□ -1.8
VPS50-210ENST00000471188 NUP43Q8NFH3 380 aa3.78□□□□□ -1.8
VPS50-210ENST00000471188 TMEM37Q8WXS4 190 aa3.78□□□□□ -1.8
VPS50-210ENST00000471188 RSC1A1Q92681 617 aa3.78□□□□□ -1.8
VPS50-210ENST00000471188 HAS2Q92819 552 aa3.78□□□□□ -1.8
VPS50-210ENST00000471188 CMBLQ96DG6 245 aa3.78□□□□□ -1.8
VPS50-210ENST00000471188 TVP23CQ96ET8 276 aa3.78□□□□□ -1.8
VPS50-210ENST00000471188 SLC41A2Q96JW4 573 aa3.78□□□□□ -1.8
VPS50-210ENST00000471188 TSSK2Q96PF2 358 aa3.78□□□□□ -1.8
VPS50-210ENST00000471188 TP53RKQ96S44 253 aa3.78□□□□□ -1.8
VPS50-210ENST00000471188 FBRSQ9HAH7 460 aa3.78□□□□□ -1.8
VPS50-210ENST00000471188 RXFP3Q9NSD7 469 aa3.78□□□□□ -1.8
VPS50-210ENST00000471188 OR52A1Q9UKL2 312 aa3.78□□□□□ -1.8
VPS50-210ENST00000471188 ZNF443Q9Y2A4 671 aaPredicted RBP3.78□□□□□ -1.8
VPS50-210ENST00000471188 HIF3AQ9Y2N7 669 aa3.78□□□□□ -1.8
VPS50-210ENST00000471188 TRBV6-7A0A0A0MS04 114 aa3.78□□□□□ -1.8
VPS50-210ENST00000471188 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.78□□□□□ -1.8
VPS50-210ENST00000471188 LNP1A1A4G5 178 aa3.78□□□□□ -1.8
VPS50-210ENST00000471188 FTCDNL1E5RQL4 147 aa3.78□□□□□ -1.8
VPS50-210ENST00000471188 DOK2O60496 412 aa3.78□□□□□ -1.8
VPS50-210ENST00000471188 KNG1P01042 644 aa3.78□□□□□ -1.8
VPS50-210ENST00000471188 TK1P04183 234 aa3.78□□□□□ -1.8
VPS50-210ENST00000471188 MELTFP08582 738 aa3.78□□□□□ -1.8
VPS50-210ENST00000471188 SLC35G6P0C7Q6 338 aa3.78□□□□□ -1.8
VPS50-210ENST00000471188 FUT3P21217 361 aa3.78□□□□□ -1.8
VPS50-210ENST00000471188 SLC2A5P22732 501 aa3.78□□□□□ -1.8
VPS50-210ENST00000471188 CHRNB4P30926 498 aa3.78□□□□□ -1.8
VPS50-210ENST00000471188 MAS1LP35410 378 aa3.78□□□□□ -1.8
VPS50-210ENST00000471188 GPR3P46089 330 aa3.78□□□□□ -1.8
VPS50-210ENST00000471188 RAB7AP51149 207 aa3.78□□□□□ -1.8
VPS50-210ENST00000471188 BTN3A2P78410 334 aa3.78□□□□□ -1.8
VPS50-210ENST00000471188 SSBP1Q04837 148 aaKnown RBP3.78□□□□□ -1.8
VPS50-210ENST00000471188 SRSF5Q13243 272 aaKnown RBP3.78□□□□□ -1.8
VPS50-210ENST00000471188 SQSTM1Q13501 440 aa3.78□□□□□ -1.8
VPS50-210ENST00000471188 MRPL58Q14197 206 aaKnown RBP3.78□□□□□ -1.8
VPS50-210ENST00000471188 IAH1Q2TAA2 248 aaPredicted RBP3.78□□□□□ -1.8
VPS50-210ENST00000471188 PRAMEF14Q5SWL7 426 aa3.78□□□□□ -1.8
VPS50-210ENST00000471188 OPN5Q6U736 354 aa3.78□□□□□ -1.8
VPS50-210ENST00000471188 DNM1P46Q6ZS02 220 aa3.78□□□□□ -1.8
VPS50-210ENST00000471188 Q6ZVL8 140 aa3.78□□□□□ -1.8
VPS50-210ENST00000471188 CYB561D1Q8N8Q1 229 aa3.78□□□□□ -1.8
VPS50-210ENST00000471188 ZDHHC22Q8N966 263 aa3.78□□□□□ -1.8
VPS50-210ENST00000471188 ADPRHL1Q8NDY3 354 aa3.78□□□□□ -1.8
VPS50-210ENST00000471188 OR1L6Q8NGR2 347 aa3.78□□□□□ -1.8
VPS50-210ENST00000471188 OR6N2Q8NGY6 317 aa3.78□□□□□ -1.8
VPS50-210ENST00000471188 ZNF461Q8TAF7 563 aa3.78□□□□□ -1.8
VPS50-210ENST00000471188 GPR119Q8TDV5 335 aa3.78□□□□□ -1.8
VPS50-210ENST00000471188 ZNRF4Q8WWF5 429 aa3.78□□□□□ -1.8
VPS50-210ENST00000471188 CDS1Q92903 461 aa3.78□□□□□ -1.8
VPS50-210ENST00000471188 C2orf50Q96LR7 162 aa3.78□□□□□ -1.8
VPS50-210ENST00000471188 ZNF558Q96NG5 402 aa3.78□□□□□ -1.8
VPS50-210ENST00000471188 HIST1H2AAQ96QV6 131 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms