RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 UBE2UQ5VVX9 321 aa4.1□□□□□ -1.75
SF3B1-208ENST00000470268 ANKRD16Q6P6B7 361 aa4.1□□□□□ -1.75
SF3B1-208ENST00000470268 CCBE1Q6UXH8 406 aaPredicted RBP4.1□□□□□ -1.75
SF3B1-208ENST00000470268 PLEKHG7Q6ZR37 379 aa4.1□□□□□ -1.75
SF3B1-208ENST00000470268 HIST2H3AQ71DI3 136 aa4.1□□□□□ -1.75
SF3B1-208ENST00000470268 SLC16A14Q7RTX9 510 aa4.1□□□□□ -1.75
SF3B1-208ENST00000470268 DCXRQ7Z4W1 244 aa4.1□□□□□ -1.75
SF3B1-208ENST00000470268 MYPOPQ86VE0 399 aaPredicted RBP4.1□□□□□ -1.75
SF3B1-208ENST00000470268 ZNF584Q8IVC4 421 aa4.1□□□□□ -1.75
SF3B1-208ENST00000470268 ACBD7Q8N6N7 88 aa4.1□□□□□ -1.75
SF3B1-208ENST00000470268 ZNF485Q8NCK3 441 aa4.1□□□□□ -1.75
SF3B1-208ENST00000470268 CPEB3Q8NE35 698 aaKnown RBP4.1□□□□□ -1.75
SF3B1-208ENST00000470268 OR2T27Q8NH04 317 aa4.1□□□□□ -1.75
SF3B1-208ENST00000470268 OR52N5Q8NH56 324 aa4.1□□□□□ -1.75
SF3B1-208ENST00000470268 AKR7LQ8NHP1 331 aa4.1□□□□□ -1.75
SF3B1-208ENST00000470268 ZNF420Q8TAQ5 688 aaPredicted RBP4.1□□□□□ -1.75
SF3B1-208ENST00000470268 SLC7A6Q92536 515 aa4.1□□□□□ -1.75
SF3B1-208ENST00000470268 S100PBPQ96BU1 408 aa4.1□□□□□ -1.75
SF3B1-208ENST00000470268 TMEM80Q96HE8 168 aa4.1□□□□□ -1.75
SF3B1-208ENST00000470268 OPALINQ96PE5 141 aa4.1□□□□□ -1.75
SF3B1-208ENST00000470268 DCLRE1CQ96SD1 692 aaKnown RBP4.1□□□□□ -1.75
SF3B1-208ENST00000470268 ABHD6Q9BV23 337 aa4.1□□□□□ -1.75
SF3B1-208ENST00000470268 ISG20L2Q9H9L3 353 aaKnown RBP4.1□□□□□ -1.75
SF3B1-208ENST00000470268 B3GNT2Q9NY97 397 aa4.1□□□□□ -1.75
SF3B1-208ENST00000470268 COQ3Q9NZJ6 369 aa4.1□□□□□ -1.75
SF3B1-208ENST00000470268 ZMAT5Q9UDW3 170 aaKnown RBP4.1□□□□□ -1.75
SF3B1-208ENST00000470268 COL12A1Q99715 3063 aa4.1□□□□□ -1.75
SF3B1-208ENST00000470268 ZNF462Q96JM2 2506 aa4.1□□□□□ -1.75
SF3B1-208ENST00000470268 PHF3Q92576 2039 aaKnown RBP4.1□□□□□ -1.75
SF3B1-208ENST00000470268 ARHGAP21Q5T5U3 1957 aa4.09□□□□□ -1.75
SF3B1-208ENST00000470268 DAPL1A0PJW8 107 aa4.09□□□□□ -1.75
SF3B1-208ENST00000470268 OR5H1A6NKK0 313 aa4.09□□□□□ -1.75
SF3B1-208ENST00000470268 SYNGR3O43761 229 aa4.09□□□□□ -1.75
SF3B1-208ENST00000470268 AGFG2O95081 481 aa4.09□□□□□ -1.75
SF3B1-208ENST00000470268 GABARAPO95166 117 aa4.09□□□□□ -1.75
SF3B1-208ENST00000470268 RAB36O95755 333 aa4.09□□□□□ -1.75
SF3B1-208ENST00000470268 ABHD16AO95870 558 aa4.09□□□□□ -1.75
SF3B1-208ENST00000470268 CST2P09228 141 aa4.09□□□□□ -1.75
SF3B1-208ENST00000470268 UGT2B10P36537 528 aa4.09□□□□□ -1.75
SF3B1-208ENST00000470268 OR12D2P58182 307 aa4.09□□□□□ -1.75
SF3B1-208ENST00000470268 TGFBR3Q03167 851 aa4.09□□□□□ -1.75
SF3B1-208ENST00000470268 TBCEQ15813 527 aaPredicted RBP4.09□□□□□ -1.75
SF3B1-208ENST00000470268 FBXL19-AS1Q494R0 122 aa4.09□□□□□ -1.75
SF3B1-208ENST00000470268 TP53I3Q53FA7 332 aa4.09□□□□□ -1.75
SF3B1-208ENST00000470268 ZNF774Q6NX45 483 aa4.09□□□□□ -1.75
SF3B1-208ENST00000470268 LRRN1Q6UXK5 716 aa4.09□□□□□ -1.75
SF3B1-208ENST00000470268 BHLHA15Q7RTS1 189 aaPredicted RBP4.09□□□□□ -1.75
SF3B1-208ENST00000470268 ABHD12BQ7Z5M8 362 aaPredicted RBP4.09□□□□□ -1.75
SF3B1-208ENST00000470268 NAA40Q86UY6 237 aa4.09□□□□□ -1.75
SF3B1-208ENST00000470268 MDP1Q86V88 176 aa4.09□□□□□ -1.75
SF3B1-208ENST00000470268 P2RY8Q86VZ1 359 aa4.09□□□□□ -1.75
SF3B1-208ENST00000470268 OR10H5Q8NGA6 315 aa4.09□□□□□ -1.75
SF3B1-208ENST00000470268 CA5BP1Q8WTZ4 195 aa4.09□□□□□ -1.75
SF3B1-208ENST00000470268 RAB2BQ8WUD1 216 aa4.09□□□□□ -1.75
SF3B1-208ENST00000470268 THEM6Q8WUY1 208 aa4.09□□□□□ -1.75
SF3B1-208ENST00000470268 RNF133Q8WVZ7 376 aa4.09□□□□□ -1.75
SF3B1-208ENST00000470268 IPCEF1Q8WWN9 437 aaPredicted RBP4.09□□□□□ -1.75
SF3B1-208ENST00000470268 HSD17B8Q92506 261 aa4.09□□□□□ -1.75
SF3B1-208ENST00000470268 MYDGFQ969H8 173 aa4.09□□□□□ -1.75
SF3B1-208ENST00000470268 TMEM203Q969S6 136 aa4.09□□□□□ -1.75
SF3B1-208ENST00000470268 PPP1R14BQ96C90 147 aa4.09□□□□□ -1.75
SF3B1-208ENST00000470268 CHCHD6Q9BRQ6 235 aa4.09□□□□□ -1.75
SF3B1-208ENST00000470268 C1QTNF6Q9BXI9 259 aa4.09□□□□□ -1.75
SF3B1-208ENST00000470268 CDCA4Q9BXL8 241 aa4.09□□□□□ -1.75
SF3B1-208ENST00000470268 OR2H1Q9GZK4 316 aa4.09□□□□□ -1.75
SF3B1-208ENST00000470268 ACTR6Q9GZN1 396 aa4.09□□□□□ -1.75
SF3B1-208ENST00000470268 WNT5BQ9H1J7 359 aa4.09□□□□□ -1.75
SF3B1-208ENST00000470268 SLC17A5Q9NRA2 495 aa4.09□□□□□ -1.75
SF3B1-208ENST00000470268 SLCO1C1Q9NYB5 712 aa4.09□□□□□ -1.75
SF3B1-208ENST00000470268 MRM2Q9UI43 246 aaKnown RBP4.09□□□□□ -1.75
SF3B1-208ENST00000470268 LAMP5Q9UJQ1 280 aa4.09□□□□□ -1.75
SF3B1-208ENST00000470268 FBXL3Q9UKT7 428 aa4.09□□□□□ -1.75
SF3B1-208ENST00000470268 POLR1DQ9Y2S0 133 aa4.09□□□□□ -1.75
SF3B1-208ENST00000470268 LSM2Q9Y333 95 aaKnown RBP4.09□□□□□ -1.75
SF3B1-208ENST00000470268 RP1L1Q8IWN7 2480 aaPredicted RBP4.09□□□□□ -1.76
SF3B1-208ENST00000470268 LOC100509620A0A075B734 347 aa4.09□□□□□ -1.76
SF3B1-208ENST00000470268 C5orf63A6NC05 138 aa4.09□□□□□ -1.76
SF3B1-208ENST00000470268 WIPF3A6NGB9 483 aa4.09□□□□□ -1.76
SF3B1-208ENST00000470268 E9PI62 339 aa4.09□□□□□ -1.76
SF3B1-208ENST00000470268 C16orf97H3BN30 126 aa4.09□□□□□ -1.76
SF3B1-208ENST00000470268 C19orf84I3L1E1 186 aa4.09□□□□□ -1.76
SF3B1-208ENST00000470268 ZNF701M0R085 212 aaPredicted RBP4.09□□□□□ -1.76
SF3B1-208ENST00000470268 MAGEB3O15480 346 aa4.09□□□□□ -1.76
SF3B1-208ENST00000470268 GPX5O75715 221 aa4.09□□□□□ -1.76
SF3B1-208ENST00000470268 FARS2O95363 451 aaKnown RBP4.09□□□□□ -1.76
SF3B1-208ENST00000470268 PNPP00491 289 aa4.09□□□□□ -1.76
SF3B1-208ENST00000470268 PLATP00750 562 aa4.09□□□□□ -1.76
SF3B1-208ENST00000470268 IGKV3-15P01624 115 aa4.09□□□□□ -1.76
SF3B1-208ENST00000470268 CD79AP11912 226 aa4.09□□□□□ -1.76
SF3B1-208ENST00000470268 CCL2P13500 99 aa4.09□□□□□ -1.76
SF3B1-208ENST00000470268 PLA2G2AP14555 144 aa4.09□□□□□ -1.76
SF3B1-208ENST00000470268 OPRL1P41146 370 aa4.09□□□□□ -1.76
SF3B1-208ENST00000470268 GUCA1AP43080 201 aaPredicted RBP4.09□□□□□ -1.76
SF3B1-208ENST00000470268 CAPZA2P47755 286 aa4.09□□□□□ -1.76
SF3B1-208ENST00000470268 RGS6P49758 472 aa4.09□□□□□ -1.76
SF3B1-208ENST00000470268 ASCL1P50553 236 aa4.09□□□□□ -1.76
SF3B1-208ENST00000470268 TAB1Q15750 504 aa4.09□□□□□ -1.76
SF3B1-208ENST00000470268 SLC25A35Q3KQZ1 300 aa4.09□□□□□ -1.76
SF3B1-208ENST00000470268 CDONQ4KMG0 1287 aa4.09□□□□□ -1.76
SF3B1-208ENST00000470268 PABPC1L2AQ5JQF8 200 aa4.09□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms