RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 MRPL52Q86TS9 123 aaKnown RBP3.12□□□□□ -1.91
COL11A1-208ENST00000470170 TRAPPC5Q8IUR0 188 aa3.12□□□□□ -1.91
COL11A1-208ENST00000470170 STPG2Q8N412 459 aa3.12□□□□□ -1.91
COL11A1-208ENST00000470170 KIR3DL3Q8N743 410 aa3.12□□□□□ -1.91
COL11A1-208ENST00000470170 CATSPER1Q8NEC5 780 aa3.12□□□□□ -1.91
COL11A1-208ENST00000470170 VN1R2Q8NFZ6 395 aa3.12□□□□□ -1.91
COL11A1-208ENST00000470170 OR2Y1Q8NGV0 311 aa3.12□□□□□ -1.91
COL11A1-208ENST00000470170 PIGXQ8TBF5 258 aa3.12□□□□□ -1.91
COL11A1-208ENST00000470170 FAM45AQ8TCE6 357 aa3.12□□□□□ -1.91
COL11A1-208ENST00000470170 SLC7A13Q8TCU3 470 aa3.12□□□□□ -1.91
COL11A1-208ENST00000470170 RNASEH2CQ8TDP1 164 aaKnown RBP3.12□□□□□ -1.91
COL11A1-208ENST00000470170 IL1F10Q8WWZ1 152 aa3.12□□□□□ -1.91
COL11A1-208ENST00000470170 OR8D1Q8WZ84 308 aa3.12□□□□□ -1.91
COL11A1-208ENST00000470170 UFD1Q92890 307 aa3.12□□□□□ -1.91
COL11A1-208ENST00000470170 NEIL2Q969S2 332 aa3.12□□□□□ -1.91
COL11A1-208ENST00000470170 KCNA7Q96RP8 456 aa3.12□□□□□ -1.91
COL11A1-208ENST00000470170 TM2D1Q9BX74 207 aa3.12□□□□□ -1.91
COL11A1-208ENST00000470170 LHX5Q9H2C1 402 aa3.12□□□□□ -1.91
COL11A1-208ENST00000470170 MFSD1Q9H3U5 465 aa3.12□□□□□ -1.91
COL11A1-208ENST00000470170 REEP4Q9H6H4 257 aa3.12□□□□□ -1.91
COL11A1-208ENST00000470170 PARVBQ9HBI1 364 aa3.12□□□□□ -1.91
COL11A1-208ENST00000470170 TMBIM4Q9HC24 238 aa3.12□□□□□ -1.91
COL11A1-208ENST00000470170 DDX19AQ9NUU7 478 aaKnown RBP3.12□□□□□ -1.91
COL11A1-208ENST00000470170 SDHAF2Q9NX18 166 aa3.12□□□□□ -1.91
COL11A1-208ENST00000470170 FBXL3Q9UKT7 428 aa3.12□□□□□ -1.91
COL11A1-208ENST00000470170 KCNIP3Q9Y2W7 256 aa3.12□□□□□ -1.91
COL11A1-208ENST00000470170 USH1CQ9Y6N9 552 aa3.12□□□□□ -1.91
COL11A1-208ENST00000470170 ABCB11O95342 1321 aa3.12□□□□□ -1.91
COL11A1-208ENST00000470170 GTF3C1Q12789 2109 aa3.11□□□□□ -1.91
COL11A1-208ENST00000470170 AK9Q5TCS8 1911 aa3.11□□□□□ -1.91
COL11A1-208ENST00000470170 A0A0A6YYD5 115 aa3.11□□□□□ -1.91
COL11A1-208ENST00000470170 IGHV2-70DA0A0C4DH43 119 aa3.11□□□□□ -1.91
COL11A1-208ENST00000470170 OR5B21A6NL26 309 aa3.11□□□□□ -1.91
COL11A1-208ENST00000470170 GJE1A6NN92 205 aa3.11□□□□□ -1.91
COL11A1-208ENST00000470170 HACD1B0YJ81 288 aa3.11□□□□□ -1.91
COL11A1-208ENST00000470170 IDSB3KWA1 339 aa3.11□□□□□ -1.91
COL11A1-208ENST00000470170 C9J4A7 227 aa3.11□□□□□ -1.91
COL11A1-208ENST00000470170 FTCDNL1E5RQL4 147 aa3.11□□□□□ -1.91
COL11A1-208ENST00000470170 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.11□□□□□ -1.91
COL11A1-208ENST00000470170 H7C2Y5 167 aa3.11□□□□□ -1.91
COL11A1-208ENST00000470170 TGOLN2O43493 480 aa3.11□□□□□ -1.91
COL11A1-208ENST00000470170 EEDO75530 441 aaKnown RBP3.11□□□□□ -1.91
COL11A1-208ENST00000470170 TRAPPC6AO75865 159 aa3.11□□□□□ -1.91
COL11A1-208ENST00000470170 GLSO94925 669 aaPredicted RBP3.11□□□□□ -1.91
COL11A1-208ENST00000470170 LSM8O95777 96 aaKnown RBP3.11□□□□□ -1.91
COL11A1-208ENST00000470170 DHFRP00374 187 aa3.11□□□□□ -1.91
COL11A1-208ENST00000470170 CALB1P05937 261 aa3.11□□□□□ -1.91
COL11A1-208ENST00000470170 CDK1P06493 297 aa3.11□□□□□ -1.91
COL11A1-208ENST00000470170 C2P06681 752 aa3.11□□□□□ -1.91
COL11A1-208ENST00000470170 H2AFZP0C0S5 128 aa3.11□□□□□ -1.91
COL11A1-208ENST00000470170 GFAPP14136 432 aa3.11□□□□□ -1.91
COL11A1-208ENST00000470170 CBR1P16152 277 aa3.11□□□□□ -1.91
COL11A1-208ENST00000470170 CELP19835 753 aa3.11□□□□□ -1.91
COL11A1-208ENST00000470170 COX5AP20674 150 aa3.11□□□□□ -1.91
COL11A1-208ENST00000470170 CMA1P23946 247 aa3.11□□□□□ -1.91
COL11A1-208ENST00000470170 OR1E1P30953 314 aa3.11□□□□□ -1.91
COL11A1-208ENST00000470170 FGF9P31371 208 aaPredicted RBP3.11□□□□□ -1.91
COL11A1-208ENST00000470170 RFC3P40938 356 aa3.11□□□□□ -1.91
COL11A1-208ENST00000470170 NBL1P41271 181 aa3.11□□□□□ -1.91
COL11A1-208ENST00000470170 CDK9P50750 372 aaKnown RBP3.11□□□□□ -1.91
COL11A1-208ENST00000470170 AP2S1P53680 142 aaPredicted RBP3.11□□□□□ -1.91
COL11A1-208ENST00000470170 OR4D2P58180 307 aa3.11□□□□□ -1.91
COL11A1-208ENST00000470170 SPCS3P61009 180 aa3.11□□□□□ -1.91
COL11A1-208ENST00000470170 AESQ08117 197 aa3.11□□□□□ -1.91
COL11A1-208ENST00000470170 SRSF6Q13247 344 aaKnown RBP3.11□□□□□ -1.91
COL11A1-208ENST00000470170 SLC9A3R2Q15599 337 aa3.11□□□□□ -1.91
COL11A1-208ENST00000470170 PSMD5Q16401 504 aa3.11□□□□□ -1.91
COL11A1-208ENST00000470170 DUSP7Q16829 419 aa3.11□□□□□ -1.91
COL11A1-208ENST00000470170 SPIN3Q5JUX0 258 aa3.11□□□□□ -1.91
COL11A1-208ENST00000470170 ACTL10Q5JWF8 245 aa3.11□□□□□ -1.91
COL11A1-208ENST00000470170 LRRN1Q6UXK5 716 aa3.11□□□□□ -1.91
COL11A1-208ENST00000470170 CYS1Q717R9 158 aa3.11□□□□□ -1.91
COL11A1-208ENST00000470170 ASCL5Q7RTU5 278 aa3.11□□□□□ -1.91
COL11A1-208ENST00000470170 TMED4Q7Z7H5 227 aa3.11□□□□□ -1.91
COL11A1-208ENST00000470170 IFNEQ86WN2 208 aa3.11□□□□□ -1.91
COL11A1-208ENST00000470170 C9orf40Q8IXQ3 194 aa3.11□□□□□ -1.91
COL11A1-208ENST00000470170 LINC01561Q8N1V8 128 aa3.11□□□□□ -1.91
COL11A1-208ENST00000470170 OR2L13Q8N349 312 aa3.11□□□□□ -1.91
COL11A1-208ENST00000470170 C2orf73Q8N5S3 287 aaPredicted RBP3.11□□□□□ -1.91
COL11A1-208ENST00000470170 EID2Q8N6I1 236 aa3.11□□□□□ -1.91
COL11A1-208ENST00000470170 OR4K2Q8NGD2 314 aa3.11□□□□□ -1.91
COL11A1-208ENST00000470170 OR52H1Q8NGJ2 320 aa3.11□□□□□ -1.91
COL11A1-208ENST00000470170 OR5L1Q8NGL2 311 aa3.11□□□□□ -1.91
COL11A1-208ENST00000470170 NEK7Q8TDX7 302 aa3.11□□□□□ -1.91
COL11A1-208ENST00000470170 CXorf40AQ8TE69 158 aa3.11□□□□□ -1.91
COL11A1-208ENST00000470170 DOK4Q8TEW6 326 aa3.11□□□□□ -1.91
COL11A1-208ENST00000470170 CREB3L1Q96BA8 519 aa3.11□□□□□ -1.91
COL11A1-208ENST00000470170 PPWD1Q96BP3 646 aaKnown RBP3.11□□□□□ -1.91
COL11A1-208ENST00000470170 YIPF6Q96EC8 236 aa3.11□□□□□ -1.91
COL11A1-208ENST00000470170 SGTBQ96EQ0 304 aa3.11□□□□□ -1.91
COL11A1-208ENST00000470170 WDR34Q96EX3 536 aa3.11□□□□□ -1.91
COL11A1-208ENST00000470170 Q96MT0 163 aa3.11□□□□□ -1.91
COL11A1-208ENST00000470170 RILPQ96NA2 401 aa3.11□□□□□ -1.91
COL11A1-208ENST00000470170 PRAP1Q96NZ9 151 aa3.11□□□□□ -1.91
COL11A1-208ENST00000470170 NEUROG2Q9H2A3 272 aa3.11□□□□□ -1.91
COL11A1-208ENST00000470170 RBKSQ9H477 322 aa3.11□□□□□ -1.91
COL11A1-208ENST00000470170 NANOGQ9H9S0 305 aa3.11□□□□□ -1.91
COL11A1-208ENST00000470170 EML4Q9HC35 981 aaKnown RBP3.11□□□□□ -1.91
COL11A1-208ENST00000470170 AGPAT4Q9NRZ5 378 aa3.11□□□□□ -1.91
COL11A1-208ENST00000470170 NLE1Q9NVX2 485 aaPredicted RBP3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms