RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 CTSZQ9UBR2 303 aa14.53□□□□□ -0.08
COL7A1-208ENST00000470076 OOEPA6NGQ2 149 aa14.52□□□□□ -0.09
COL7A1-208ENST00000470076 SRRM5B3KS81 715 aa14.52□□□□□ -0.09
COL7A1-208ENST00000470076 ZNF879B4DU55 563 aa14.52□□□□□ -0.09
COL7A1-208ENST00000470076 C3orf80F5H4A9 247 aa14.52□□□□□ -0.09
COL7A1-208ENST00000470076 P2RY10O00398 339 aa14.52□□□□□ -0.09
COL7A1-208ENST00000470076 ADAM20O43506 726 aa14.52□□□□□ -0.09
COL7A1-208ENST00000470076 XRCC2O43543 280 aa14.52□□□□□ -0.09
COL7A1-208ENST00000470076 SPARCP09486 303 aa14.52□□□□□ -0.09
COL7A1-208ENST00000470076 ENTPD1P49961 510 aa14.52□□□□□ -0.09
COL7A1-208ENST00000470076 PRKXP51817 358 aa14.52□□□□□ -0.09
COL7A1-208ENST00000470076 TAF13Q15543 124 aa14.52□□□□□ -0.09
COL7A1-208ENST00000470076 TEX30Q5JUR7 227 aa14.52□□□□□ -0.09
COL7A1-208ENST00000470076 ZNF770Q6IQ21 691 aaPredicted RBP14.52□□□□□ -0.09
COL7A1-208ENST00000470076 LYPD4Q6UWN0 246 aa14.52□□□□□ -0.09
COL7A1-208ENST00000470076 DEFB107AQ8IZN7 70 aa14.52□□□□□ -0.09
COL7A1-208ENST00000470076 BOLLQ8N9W6 283 aaKnown RBP14.52□□□□□ -0.09
COL7A1-208ENST00000470076 PNLDC1Q8NA58 520 aaKnown RBP14.52□□□□□ -0.09
COL7A1-208ENST00000470076 OR8D4Q8NGM9 314 aa14.52□□□□□ -0.09
COL7A1-208ENST00000470076 OR9Q1Q8NGQ5 310 aa14.52□□□□□ -0.09
COL7A1-208ENST00000470076 SLAMF6Q96DU3 332 aa14.52□□□□□ -0.09
COL7A1-208ENST00000470076 TBC1D23Q9NUY8 699 aa14.52□□□□□ -0.09
COL7A1-208ENST00000470076 C14orf119Q9NWQ9 140 aa14.52□□□□□ -0.09
COL7A1-208ENST00000470076 C1orf123Q9NWV4 160 aa14.52□□□□□ -0.09
COL7A1-208ENST00000470076 BAIAP2Q9UQB8 552 aa14.52□□□□□ -0.09
COL7A1-208ENST00000470076 MMP24Q9Y5R2 645 aa14.52□□□□□ -0.09
COL7A1-208ENST00000470076 A0A1B0GUS0 222 aa14.51□□□□□ -0.09
COL7A1-208ENST00000470076 C5orf63A6NC05 138 aa14.51□□□□□ -0.09
COL7A1-208ENST00000470076 ZNF878C9JN71 531 aa14.51□□□□□ -0.09
COL7A1-208ENST00000470076 TNFRSF13BO14836 293 aaPredicted RBP14.51□□□□□ -0.09
COL7A1-208ENST00000470076 ATP8B1O43520 1251 aa14.51□□□□□ -0.09
COL7A1-208ENST00000470076 CCNB2O95067 398 aa14.51□□□□□ -0.09
COL7A1-208ENST00000470076 GASTP01350 101 aa14.51□□□□□ -0.09
COL7A1-208ENST00000470076 PSKH1P11801 424 aa14.51□□□□□ -0.09
COL7A1-208ENST00000470076 MDKP21741 143 aaPredicted RBP14.51□□□□□ -0.09
COL7A1-208ENST00000470076 ANOS1P23352 680 aa14.51□□□□□ -0.09
COL7A1-208ENST00000470076 CFHR2P36980 270 aa14.51□□□□□ -0.09
COL7A1-208ENST00000470076 DDOSTP39656 456 aa14.51□□□□□ -0.09
COL7A1-208ENST00000470076 MAGEA2P43356 314 aa14.51□□□□□ -0.09
COL7A1-208ENST00000470076 BLVRAP53004 296 aa14.51□□□□□ -0.09
COL7A1-208ENST00000470076 HOXA4Q00056 320 aaPredicted RBP14.51□□□□□ -0.09
COL7A1-208ENST00000470076 CRMP1Q14194 572 aa14.51□□□□□ -0.09
COL7A1-208ENST00000470076 C11orf91Q3C1V1 193 aa14.51□□□□□ -0.09
COL7A1-208ENST00000470076 OR56B2PQ8NGI1 322 aa14.51□□□□□ -0.09
COL7A1-208ENST00000470076 TSSK6Q9BXA6 273 aa14.51□□□□□ -0.09
COL7A1-208ENST00000470076 NMNAT2Q9BZQ4 307 aa14.51□□□□□ -0.09
COL7A1-208ENST00000470076 CENPMQ9NSP4 180 aa14.51□□□□□ -0.09
COL7A1-208ENST00000470076 ARL8BQ9NVJ2 186 aa14.51□□□□□ -0.09
COL7A1-208ENST00000470076 ACTR3BQ9P1U1 418 aa14.51□□□□□ -0.09
COL7A1-208ENST00000470076 A6NLC8 198 aa14.5□□□□□ -0.09
COL7A1-208ENST00000470076 ZNF593O00488 134 aaPredicted RBP14.5□□□□□ -0.09
COL7A1-208ENST00000470076 TOX4O94842 621 aa14.5□□□□□ -0.09
COL7A1-208ENST00000470076 GRPP07492 148 aa14.5□□□□□ -0.09
COL7A1-208ENST00000470076 SFTPBP07988 381 aa14.5□□□□□ -0.09
COL7A1-208ENST00000470076 SLC2A1P11166 492 aa14.5□□□□□ -0.09
COL7A1-208ENST00000470076 MMP9P14780 707 aa14.5□□□□□ -0.09
COL7A1-208ENST00000470076 SLC15A1P46059 708 aa14.5□□□□□ -0.09
COL7A1-208ENST00000470076 SLC25A1P53007 311 aa14.5□□□□□ -0.09
COL7A1-208ENST00000470076 MXRA7P84157 204 aa14.5□□□□□ -0.09
COL7A1-208ENST00000470076 TREML4Q6UXN2 200 aa14.5□□□□□ -0.09
COL7A1-208ENST00000470076 CYP2R1Q6VVX0 501 aa14.5□□□□□ -0.09
COL7A1-208ENST00000470076 Q6YL49 198 aa14.5□□□□□ -0.09
COL7A1-208ENST00000470076 TMEM86BQ8N661 226 aa14.5□□□□□ -0.09
COL7A1-208ENST00000470076 GCSAMQ8N6F7 178 aa14.5□□□□□ -0.09
COL7A1-208ENST00000470076 ZNF511Q8NB15 262 aa14.5□□□□□ -0.09
COL7A1-208ENST00000470076 AQP11Q8NBQ7 271 aa14.5□□□□□ -0.09
COL7A1-208ENST00000470076 OR2T33Q8NG76 320 aa14.5□□□□□ -0.09
COL7A1-208ENST00000470076 TAF15Q92804 592 aaKnown RBP eCLIP14.5□□□□□ -0.09
COL7A1-208ENST00000470076 SPSB4Q96A44 273 aa14.5□□□□□ -0.09
COL7A1-208ENST00000470076 FAM71F1Q96KD3 344 aaPredicted RBP14.5□□□□□ -0.09
COL7A1-208ENST00000470076 WDFY2Q96P53 400 aa14.5□□□□□ -0.09
COL7A1-208ENST00000470076 TBX15Q96SF7 602 aa14.5□□□□□ -0.09
COL7A1-208ENST00000470076 SMURF1Q9HCE7 757 aa14.5□□□□□ -0.09
COL7A1-208ENST00000470076 ARL2BPQ9Y2Y0 163 aa14.5□□□□□ -0.09
COL7A1-208ENST00000470076 hCG_1807616A0A1W2PRN6 198 aa14.49□□□□□ -0.09
COL7A1-208ENST00000470076 FAM181BA6NEQ2 426 aa14.49□□□□□ -0.09
COL7A1-208ENST00000470076 ANKRD30BLA7E2S9 258 aa14.49□□□□□ -0.09
COL7A1-208ENST00000470076 DCTN3O75935 186 aa14.49□□□□□ -0.09
COL7A1-208ENST00000470076 LHBP01229 141 aa14.49□□□□□ -0.09
COL7A1-208ENST00000470076 CRYBA1P05813 215 aa14.49□□□□□ -0.09
COL7A1-208ENST00000470076 GYPBP06028 91 aa14.49□□□□□ -0.09
COL7A1-208ENST00000470076 SPI1P17947 270 aa14.49□□□□□ -0.09
COL7A1-208ENST00000470076 OMGP23515 440 aa14.49□□□□□ -0.09
COL7A1-208ENST00000470076 GRK5P34947 590 aa14.49□□□□□ -0.09
COL7A1-208ENST00000470076 MNAT1P51948 309 aa14.49□□□□□ -0.09
COL7A1-208ENST00000470076 GRB2P62993 217 aaKnown RBP14.49□□□□□ -0.09
COL7A1-208ENST00000470076 PDCD1Q15116 288 aa14.49□□□□□ -0.09
COL7A1-208ENST00000470076 METTL11BQ5VVY1 283 aa14.49□□□□□ -0.09
COL7A1-208ENST00000470076 RUSC1-AS1Q66K80 236 aa14.49□□□□□ -0.09
COL7A1-208ENST00000470076 ZNF826PQ6ZT77 177 aa14.49□□□□□ -0.09
COL7A1-208ENST00000470076 FAM90A1Q86YD7 464 aa14.49□□□□□ -0.09
COL7A1-208ENST00000470076 OR6K6Q8NGW6 343 aa14.49□□□□□ -0.09
COL7A1-208ENST00000470076 OR8S1Q8NH09 359 aa14.49□□□□□ -0.09
COL7A1-208ENST00000470076 OR4F5Q8NH21 305 aa14.49□□□□□ -0.09
COL7A1-208ENST00000470076 GATAD2BQ8WXI9 593 aa14.49□□□□□ -0.09
COL7A1-208ENST00000470076 TOR3AQ9H497 397 aa14.49□□□□□ -0.09
COL7A1-208ENST00000470076 MAGIXQ9H6Y5 334 aa14.49□□□□□ -0.09
COL7A1-208ENST00000470076 SP140LQ9H930 580 aa14.49□□□□□ -0.09
COL7A1-208ENST00000470076 KAAG1Q9UBP8 84 aa14.49□□□□□ -0.09
COL7A1-208ENST00000470076 N6AMT1Q9Y5N5 214 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms