RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-208ENST00000470045 PCDHB10Q9UN67 800 aa11.8□□□□□ -0.52
COMMD3-208ENST00000470045 LOC105371242A0A075B767 164 aa11.79□□□□□ -0.52
COMMD3-208ENST00000470045 IGHV3-64DA0A0J9YX35 117 aa11.79□□□□□ -0.52
COMMD3-208ENST00000470045 TCF21O43680 179 aa11.79□□□□□ -0.52
COMMD3-208ENST00000470045 GMDSO60547 372 aa11.79□□□□□ -0.52
COMMD3-208ENST00000470045 ATP5HO75947 161 aa11.79□□□□□ -0.52
COMMD3-208ENST00000470045 APOC1P02654 83 aa11.79□□□□□ -0.52
COMMD3-208ENST00000470045 CA6P23280 308 aa11.79□□□□□ -0.52
COMMD3-208ENST00000470045 CX3CR1P49238 355 aa11.79□□□□□ -0.52
COMMD3-208ENST00000470045 SRSF2Q01130 221 aaKnown RBP11.79□□□□□ -0.52
COMMD3-208ENST00000470045 OR8G1Q15617 311 aa11.79□□□□□ -0.52
COMMD3-208ENST00000470045 ATP6AP1Q15904 470 aa11.79□□□□□ -0.52
COMMD3-208ENST00000470045 ZNF404Q494X3 552 aa11.79□□□□□ -0.52
COMMD3-208ENST00000470045 SLC35D3Q5M8T2 416 aa11.79□□□□□ -0.52
COMMD3-208ENST00000470045 TMEM236Q5W0B7 351 aa11.79□□□□□ -0.52
COMMD3-208ENST00000470045 SPATC1Q76KD6 591 aa11.79□□□□□ -0.52
COMMD3-208ENST00000470045 CPOQ8IVL8 374 aa11.79□□□□□ -0.52
COMMD3-208ENST00000470045 C1orf87Q8N0U7 546 aa11.79□□□□□ -0.52
COMMD3-208ENST00000470045 OR56B2PQ8NGI1 322 aa11.79□□□□□ -0.52
COMMD3-208ENST00000470045 OR5K1Q8NHB7 308 aa11.79□□□□□ -0.52
COMMD3-208ENST00000470045 OTULINQ96BN8 352 aa11.79□□□□□ -0.52
COMMD3-208ENST00000470045 ZMYND19Q96E35 227 aaPredicted RBP11.79□□□□□ -0.52
COMMD3-208ENST00000470045 ADAT1Q9BUB4 502 aaKnown RBP11.79□□□□□ -0.52
COMMD3-208ENST00000470045 TMEM165Q9HC07 324 aa11.79□□□□□ -0.52
COMMD3-208ENST00000470045 PAPOLBQ9NRJ5 636 aaKnown RBP11.79□□□□□ -0.52
COMMD3-208ENST00000470045 LRCH1Q9Y2L9 728 aa11.79□□□□□ -0.52
COMMD3-208ENST00000470045 DOCK11Q5JSL3 2073 aa11.79□□□□□ -0.52
COMMD3-208ENST00000470045 A0A0A6YYJ9 748 aa11.78□□□□□ -0.52
COMMD3-208ENST00000470045 hCG_38984A0A1B0GV85 526 aa11.78□□□□□ -0.52
COMMD3-208ENST00000470045 GGT3PA6NGU5 568 aa11.78□□□□□ -0.52
COMMD3-208ENST00000470045 LRRC30A6NM36 301 aa11.78□□□□□ -0.52
COMMD3-208ENST00000470045 SELENOFO60613 162 aa11.78□□□□□ -0.52
COMMD3-208ENST00000470045 FAM20BO75063 409 aa11.78□□□□□ -0.52
COMMD3-208ENST00000470045 WNT2P09544 360 aa11.78□□□□□ -0.52
COMMD3-208ENST00000470045 ZNF12P17014 697 aa11.78□□□□□ -0.52
COMMD3-208ENST00000470045 HSD11B1P28845 292 aa11.78□□□□□ -0.52
COMMD3-208ENST00000470045 DDOSTP39656 456 aa11.78□□□□□ -0.52
COMMD3-208ENST00000470045 DAPP51397 102 aa11.78□□□□□ -0.52
COMMD3-208ENST00000470045 CRISP1P54107 249 aa11.78□□□□□ -0.52
COMMD3-208ENST00000470045 FAM3AP98173 230 aa11.78□□□□□ -0.52
COMMD3-208ENST00000470045 SCGB2A2Q13296 93 aa11.78□□□□□ -0.52
COMMD3-208ENST00000470045 MPPED2Q15777 294 aa11.78□□□□□ -0.52
COMMD3-208ENST00000470045 PRAMEF6Q5VXH4 476 aa11.78□□□□□ -0.52
COMMD3-208ENST00000470045 LIPNQ5VXI9 398 aa11.78□□□□□ -0.52
COMMD3-208ENST00000470045 SLC16A9Q7RTY1 509 aa11.78□□□□□ -0.52
COMMD3-208ENST00000470045 KLBQ86Z14 1044 aa11.78□□□□□ -0.52
COMMD3-208ENST00000470045 PLPP7Q8NBV4 271 aa11.78□□□□□ -0.52
COMMD3-208ENST00000470045 DEFB108BQ8NET1 73 aa11.78□□□□□ -0.52
COMMD3-208ENST00000470045 BBS1Q8NFJ9 593 aa11.78□□□□□ -0.52
COMMD3-208ENST00000470045 SEMA6DQ8NFY4 1073 aa11.78□□□□□ -0.52
COMMD3-208ENST00000470045 TMEM246Q9BRR3 403 aa11.78□□□□□ -0.52
COMMD3-208ENST00000470045 C19orf24Q9BVV8 132 aa11.78□□□□□ -0.52
COMMD3-208ENST00000470045 SP140LQ9H930 580 aa11.78□□□□□ -0.52
COMMD3-208ENST00000470045 KIF17Q9P2E2 1029 aa11.78□□□□□ -0.52
COMMD3-208ENST00000470045 TRAPPC2LH3BP13 241 aa11.77□□□□□ -0.53
COMMD3-208ENST00000470045 ANXA2P07355 339 aaKnown RBP11.77□□□□□ -0.53
COMMD3-208ENST00000470045 LYNP07948 512 aa11.77□□□□□ -0.53
COMMD3-208ENST00000470045 EPHA1P21709 976 aa11.77□□□□□ -0.53
COMMD3-208ENST00000470045 ZNF121P58317 390 aaPredicted RBP11.77□□□□□ -0.53
COMMD3-208ENST00000470045 ESRRGP62508 458 aa11.77□□□□□ -0.53
COMMD3-208ENST00000470045 PAX2Q02962 417 aa11.77□□□□□ -0.53
COMMD3-208ENST00000470045 PTGES3Q15185 160 aaKnown RBP11.77□□□□□ -0.53
COMMD3-208ENST00000470045 KLHL12Q53G59 568 aa11.77□□□□□ -0.53
COMMD3-208ENST00000470045 ESCO2Q56NI9 601 aa11.77□□□□□ -0.53
COMMD3-208ENST00000470045 FAM201AQ5SY85 155 aa11.77□□□□□ -0.53
COMMD3-208ENST00000470045 SPERTQ8NA61 448 aa11.77□□□□□ -0.53
COMMD3-208ENST00000470045 OR52H1Q8NGJ2 320 aa11.77□□□□□ -0.53
COMMD3-208ENST00000470045 DACT3Q96B18 629 aaPredicted RBP11.77□□□□□ -0.53
COMMD3-208ENST00000470045 SGK3Q96BR1 496 aa11.77□□□□□ -0.53
COMMD3-208ENST00000470045 PLEKHA8Q96JA3 519 aa11.77□□□□□ -0.53
COMMD3-208ENST00000470045 TEX12Q9BXU0 123 aa11.77□□□□□ -0.53
COMMD3-208ENST00000470045 GABARAPL1Q9H0R8 117 aa11.77□□□□□ -0.53
COMMD3-208ENST00000470045 C7orf69Q9H7B7 122 aa11.77□□□□□ -0.53
COMMD3-208ENST00000470045 MMP26Q9NRE1 261 aa11.77□□□□□ -0.53
COMMD3-208ENST00000470045 ZNF319Q9P2F9 582 aa11.77□□□□□ -0.53
COMMD3-208ENST00000470045 KLHDC2Q9Y2U9 406 aa11.77□□□□□ -0.53
COMMD3-208ENST00000470045 PPIAL4AQ9Y536 164 aa11.77□□□□□ -0.53
COMMD3-208ENST00000470045 INSIG2Q9Y5U4 225 aa11.77□□□□□ -0.53
COMMD3-208ENST00000470045 CCDC182A6NF36 153 aa11.76□□□□□ -0.53
COMMD3-208ENST00000470045 TBX1O43435 398 aa11.76□□□□□ -0.53
COMMD3-208ENST00000470045 ZNF205O95201 554 aa11.76□□□□□ -0.53
COMMD3-208ENST00000470045 H2BFMP0C1H6 154 aa11.76□□□□□ -0.53
COMMD3-208ENST00000470045 IRF2P14316 349 aa11.76□□□□□ -0.53
COMMD3-208ENST00000470045 RPS2P15880 293 aaKnown RBP11.76□□□□□ -0.53
COMMD3-208ENST00000470045 ADRA2CP18825 462 aa11.76□□□□□ -0.53
COMMD3-208ENST00000470045 ALOX5APP20292 161 aa11.76□□□□□ -0.53
COMMD3-208ENST00000470045 CFL1P23528 166 aaKnown RBP11.76□□□□□ -0.53
COMMD3-208ENST00000470045 NAA10P41227 235 aaPredicted RBP11.76□□□□□ -0.53
COMMD3-208ENST00000470045 PSMA6P60900 246 aaKnown RBP11.76□□□□□ -0.53
COMMD3-208ENST00000470045 APOFQ13790 326 aa11.76□□□□□ -0.53
COMMD3-208ENST00000470045 SNAPC1Q16533 368 aa11.76□□□□□ -0.53
COMMD3-208ENST00000470045 TIGD6Q17RP2 521 aa11.76□□□□□ -0.53
COMMD3-208ENST00000470045 TUSC1Q2TAM9 212 aa11.76□□□□□ -0.53
COMMD3-208ENST00000470045 C1orf146Q5VVC0 180 aa11.76□□□□□ -0.53
COMMD3-208ENST00000470045 KDM4DQ6B0I6 523 aa11.76□□□□□ -0.53
COMMD3-208ENST00000470045 DCDC5Q6ZRR9 648 aa11.76□□□□□ -0.53
COMMD3-208ENST00000470045 USP43Q70EL4 1123 aa11.76□□□□□ -0.53
COMMD3-208ENST00000470045 FAM57BQ71RH2 274 aa11.76□□□□□ -0.53
COMMD3-208ENST00000470045 OR11L1Q8NGX0 322 aa11.76□□□□□ -0.53
COMMD3-208ENST00000470045 NANPQ8TBE9 248 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms