RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 COPS4Q9BT78 406 aa11.03□□□□□ -0.64
CPSF4-210ENST00000469897 ADAT1Q9BUB4 502 aaKnown RBP11.03□□□□□ -0.64
CPSF4-210ENST00000469897 TSSK6Q9BXA6 273 aa11.03□□□□□ -0.64
CPSF4-210ENST00000469897 TRIM15Q9C019 465 aa11.03□□□□□ -0.64
CPSF4-210ENST00000469897 PRDM13Q9H4Q3 707 aa11.03□□□□□ -0.64
CPSF4-210ENST00000469897 LYVE1Q9Y5Y7 322 aa11.03□□□□□ -0.64
CPSF4-210ENST00000469897 ARHGAP32A7KAX9 2087 aa11.03□□□□□ -0.64
CPSF4-210ENST00000469897 CENPVL3A0A0U1RRI6 287 aa11.02□□□□□ -0.65
CPSF4-210ENST00000469897 FAM181BA6NEQ2 426 aa11.02□□□□□ -0.65
CPSF4-210ENST00000469897 ZNF879B4DU55 563 aa11.02□□□□□ -0.65
CPSF4-210ENST00000469897 ENSAO43768 121 aaKnown RBP11.02□□□□□ -0.65
CPSF4-210ENST00000469897 TOX4O94842 621 aa11.02□□□□□ -0.65
CPSF4-210ENST00000469897 CCNB2O95067 398 aa11.02□□□□□ -0.65
CPSF4-210ENST00000469897 GYPAP02724 150 aa11.02□□□□□ -0.65
CPSF4-210ENST00000469897 LIPFP07098 398 aa11.02□□□□□ -0.65
CPSF4-210ENST00000469897 CLUP10909 449 aa11.02□□□□□ -0.65
CPSF4-210ENST00000469897 FMO3P31513 532 aa11.02□□□□□ -0.65
CPSF4-210ENST00000469897 NPY4RP50391 375 aa11.02□□□□□ -0.65
CPSF4-210ENST00000469897 GYS2P54840 703 aa11.02□□□□□ -0.65
CPSF4-210ENST00000469897 MXRA7P84157 204 aa11.02□□□□□ -0.65
CPSF4-210ENST00000469897 CRMP1Q14194 572 aa11.02□□□□□ -0.65
CPSF4-210ENST00000469897 KCNJ8Q15842 424 aa11.02□□□□□ -0.65
CPSF4-210ENST00000469897 C16orf89Q6UX73 402 aa11.02□□□□□ -0.65
CPSF4-210ENST00000469897 Q6YL49 198 aa11.02□□□□□ -0.65
CPSF4-210ENST00000469897 RASSF6Q6ZTQ3 369 aa11.02□□□□□ -0.65
CPSF4-210ENST00000469897 LINC00471Q8N535 108 aa11.02□□□□□ -0.65
CPSF4-210ENST00000469897 SPERTQ8NA61 448 aa11.02□□□□□ -0.65
CPSF4-210ENST00000469897 OR4C15Q8NGM1 316 aa11.02□□□□□ -0.65
CPSF4-210ENST00000469897 OR4Q3Q8NH05 313 aa11.02□□□□□ -0.65
CPSF4-210ENST00000469897 SGK3Q96BR1 496 aa11.02□□□□□ -0.65
CPSF4-210ENST00000469897 SMURF1Q9HCE7 757 aa11.02□□□□□ -0.65
CPSF4-210ENST00000469897 TBC1D23Q9NUY8 699 aa11.02□□□□□ -0.65
CPSF4-210ENST00000469897 MRPL15Q9P015 296 aaKnown RBP11.02□□□□□ -0.65
CPSF4-210ENST00000469897 NOP16Q9Y3C1 178 aaKnown RBP11.02□□□□□ -0.65
CPSF4-210ENST00000469897 COMMD3-BMI1R4GMX3 469 aa11.02□□□□□ -0.65
CPSF4-210ENST00000469897 DYSFO75923 2080 aa11.02□□□□□ -0.65
CPSF4-210ENST00000469897 TRAV38-1A0A0B4J264 116 aa11.01□□□□□ -0.65
CPSF4-210ENST00000469897 OOEPA6NGQ2 149 aa11.01□□□□□ -0.65
CPSF4-210ENST00000469897 A6NLC8 198 aa11.01□□□□□ -0.65
CPSF4-210ENST00000469897 TBX1O43435 398 aa11.01□□□□□ -0.65
CPSF4-210ENST00000469897 NDUFA2O43678 99 aa11.01□□□□□ -0.65
CPSF4-210ENST00000469897 SPI1P17947 270 aa11.01□□□□□ -0.65
CPSF4-210ENST00000469897 CFHR2P36980 270 aa11.01□□□□□ -0.65
CPSF4-210ENST00000469897 ENTPD1P49961 510 aa11.01□□□□□ -0.65
CPSF4-210ENST00000469897 BPIFB3P59826 476 aa11.01□□□□□ -0.65
CPSF4-210ENST00000469897 ARF6P62330 175 aa11.01□□□□□ -0.65
CPSF4-210ENST00000469897 SRSF4Q08170 494 aaKnown RBP11.01□□□□□ -0.65
CPSF4-210ENST00000469897 PCK2Q16822 640 aa11.01□□□□□ -0.65
CPSF4-210ENST00000469897 TEX30Q5JUR7 227 aa11.01□□□□□ -0.65
CPSF4-210ENST00000469897 FIP1L1Q6UN15 594 aaKnown RBP11.01□□□□□ -0.65
CPSF4-210ENST00000469897 PIGWQ7Z7B1 504 aa11.01□□□□□ -0.65
CPSF4-210ENST00000469897 C11orf53Q8IXP5 236 aa11.01□□□□□ -0.65
CPSF4-210ENST00000469897 GCSAMQ8N6F7 178 aa11.01□□□□□ -0.65
CPSF4-210ENST00000469897 KIR3DL3Q8N743 410 aa11.01□□□□□ -0.65
CPSF4-210ENST00000469897 AQP11Q8NBQ7 271 aa11.01□□□□□ -0.65
CPSF4-210ENST00000469897 OR56B2PQ8NGI1 322 aa11.01□□□□□ -0.65
CPSF4-210ENST00000469897 WDFY2Q96P53 400 aa11.01□□□□□ -0.65
CPSF4-210ENST00000469897 TBX15Q96SF7 602 aa11.01□□□□□ -0.65
CPSF4-210ENST00000469897 NMNAT2Q9BZQ4 307 aa11.01□□□□□ -0.65
CPSF4-210ENST00000469897 PPP1R3EQ9H7J1 279 aa11.01□□□□□ -0.65
CPSF4-210ENST00000469897 MARCH7Q9H992 704 aa11.01□□□□□ -0.65
CPSF4-210ENST00000469897 ACTR3BQ9P1U1 418 aa11.01□□□□□ -0.65
CPSF4-210ENST00000469897 U3KQV3 271 aa11.01□□□□□ -0.65
CPSF4-210ENST00000469897 IGHV3OR15-7A0A075B7D8 119 aa11□□□□□ -0.65
CPSF4-210ENST00000469897 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11□□□□□ -0.65
CPSF4-210ENST00000469897 hCG_1807616A0A1W2PRN6 198 aa11□□□□□ -0.65
CPSF4-210ENST00000469897 SRRM5B3KS81 715 aa11□□□□□ -0.65
CPSF4-210ENST00000469897 P2RY10O00398 339 aa11□□□□□ -0.65
CPSF4-210ENST00000469897 DVL1O14640 695 aa11□□□□□ -0.65
CPSF4-210ENST00000469897 ATP8B1O43520 1251 aa11□□□□□ -0.65
CPSF4-210ENST00000469897 FCN3O75636 299 aa11□□□□□ -0.65
CPSF4-210ENST00000469897 SOX14O95416 240 aa11□□□□□ -0.65
CPSF4-210ENST00000469897 LHBP01229 141 aa11□□□□□ -0.65
CPSF4-210ENST00000469897 CRYBA1P05813 215 aa11□□□□□ -0.65
CPSF4-210ENST00000469897 MMP9P14780 707 aa11□□□□□ -0.65
CPSF4-210ENST00000469897 ATP6V1B2P21281 511 aa11□□□□□ -0.65
CPSF4-210ENST00000469897 SLC25A1P53007 311 aa11□□□□□ -0.65
CPSF4-210ENST00000469897 ELF3P78545 371 aaPredicted RBP11□□□□□ -0.65
CPSF4-210ENST00000469897 FAM3AP98173 230 aa11□□□□□ -0.65
CPSF4-210ENST00000469897 EIF2B1Q14232 305 aaKnown RBP11□□□□□ -0.65
CPSF4-210ENST00000469897 MICAQ29983 383 aa11□□□□□ -0.65
CPSF4-210ENST00000469897 SPATS1Q496A3 300 aa11□□□□□ -0.65
CPSF4-210ENST00000469897 TREML4Q6UXN2 200 aa11□□□□□ -0.65
CPSF4-210ENST00000469897 BTN2A1Q7KYR7 527 aa11□□□□□ -0.65
CPSF4-210ENST00000469897 PNLDC1Q8NA58 520 aaKnown RBP11□□□□□ -0.65
CPSF4-210ENST00000469897 OR6K6Q8NGW6 343 aa11□□□□□ -0.65
CPSF4-210ENST00000469897 OR8S1Q8NH09 359 aa11□□□□□ -0.65
CPSF4-210ENST00000469897 CHIAQ9BZP6 476 aa11□□□□□ -0.65
CPSF4-210ENST00000469897 SLITRK2Q9H156 845 aa11□□□□□ -0.65
CPSF4-210ENST00000469897 NOX4Q9NPH5 578 aa11□□□□□ -0.65
CPSF4-210ENST00000469897 TRIM36Q9NQ86 728 aa11□□□□□ -0.65
CPSF4-210ENST00000469897 ARMC1Q9NVT9 282 aa11□□□□□ -0.65
CPSF4-210ENST00000469897 C14orf119Q9NWQ9 140 aa11□□□□□ -0.65
CPSF4-210ENST00000469897 NDE1Q9NXR1 346 aa11□□□□□ -0.65
CPSF4-210ENST00000469897 VNN3Q9NY84 501 aa11□□□□□ -0.65
CPSF4-210ENST00000469897 ARL2BPQ9Y2Y0 163 aa11□□□□□ -0.65
CPSF4-210ENST00000469897 TCRBV5S2A0A599 114 aa10.99□□□□□ -0.65
CPSF4-210ENST00000469897 DHRS12A0PJE2 317 aa10.99□□□□□ -0.65
CPSF4-210ENST00000469897 ANKRD30BLA7E2S9 258 aa10.99□□□□□ -0.65
CPSF4-210ENST00000469897 B2RBV5 119 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms