RNA–Protein interactions for RNA: ENST00000469713.1

VPS8-220, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 668 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-220ENST00000469713 WDR82Q6UXN9 313 aa2.3□□□□□ -2.04
VPS8-220ENST00000469713 OTUD6AQ7L8S5 288 aa2.3□□□□□ -2.04
VPS8-220ENST00000469713 HMGN2P46Q86SG4 172 aa2.3□□□□□ -2.04
VPS8-220ENST00000469713 OSR2Q8N2R0 312 aa2.3□□□□□ -2.04
VPS8-220ENST00000469713 ZNF645Q8N7E2 425 aa2.3□□□□□ -2.04
VPS8-220ENST00000469713 TTLQ8NG68 377 aa2.3□□□□□ -2.04
VPS8-220ENST00000469713 GPX8Q8TED1 209 aa2.3□□□□□ -2.04
VPS8-220ENST00000469713 DEDD2Q8WXF8 326 aa2.3□□□□□ -2.04
VPS8-220ENST00000469713 C9orf72Q96LT7 481 aa2.3□□□□□ -2.04
VPS8-220ENST00000469713 RNF157Q96PX1 679 aa2.3□□□□□ -2.04
VPS8-220ENST00000469713 TBL1YQ9BQ87 522 aa2.3□□□□□ -2.04
VPS8-220ENST00000469713 ZNF2Q9BSG1 426 aaPredicted RBP2.3□□□□□ -2.04
VPS8-220ENST00000469713 RSG1Q9BU20 258 aa2.3□□□□□ -2.04
VPS8-220ENST00000469713 C8orf33Q9H7E9 229 aaPredicted RBP2.3□□□□□ -2.04
VPS8-220ENST00000469713 YEATS2Q9ULM3 1422 aa2.29□□□□□ -2.04
VPS8-220ENST00000469713 IGLV2-18A0A075B6J9 118 aa2.29□□□□□ -2.04
VPS8-220ENST00000469713 IGKV1-27A0A075B6S5 117 aa2.29□□□□□ -2.04
VPS8-220ENST00000469713 IGHV3-72A0A0B4J1Y9 119 aa2.29□□□□□ -2.04
VPS8-220ENST00000469713 OR5H1A6NKK0 313 aa2.29□□□□□ -2.04
VPS8-220ENST00000469713 ZNF850A8MQ14 1090 aa2.29□□□□□ -2.04
VPS8-220ENST00000469713 CASC3O15234 703 aaKnown RBP2.29□□□□□ -2.04
VPS8-220ENST00000469713 RRP8O43159 456 aaKnown RBP2.29□□□□□ -2.04
VPS8-220ENST00000469713 XRCC2O43543 280 aa2.29□□□□□ -2.04
VPS8-220ENST00000469713 SLC16A7O60669 478 aa2.29□□□□□ -2.04
VPS8-220ENST00000469713 SLC19A2O60779 497 aa2.29□□□□□ -2.04
VPS8-220ENST00000469713 SERPINB7O75635 380 aa2.29□□□□□ -2.04
VPS8-220ENST00000469713 RBBP9O75884 186 aa2.29□□□□□ -2.04
VPS8-220ENST00000469713 IGHV3-11P01762 117 aa2.29□□□□□ -2.04
VPS8-220ENST00000469713 CD74P04233 296 aa2.29□□□□□ -2.04
VPS8-220ENST00000469713 GLAP06280 429 aa2.29□□□□□ -2.04
VPS8-220ENST00000469713 RALBP11234 206 aa2.29□□□□□ -2.04
VPS8-220ENST00000469713 RAB5AP20339 215 aa2.29□□□□□ -2.04
VPS8-220ENST00000469713 GGT2P36268 569 aa2.29□□□□□ -2.04
VPS8-220ENST00000469713 MYCNOSP40205 109 aa2.29□□□□□ -2.04
VPS8-220ENST00000469713 GPR1P46091 355 aa2.29□□□□□ -2.04
VPS8-220ENST00000469713 CLDN8P56748 225 aa2.29□□□□□ -2.04
VPS8-220ENST00000469713 CLDN18P56856 261 aa2.29□□□□□ -2.04
VPS8-220ENST00000469713 SIGLEC14Q08ET2 396 aa2.29□□□□□ -2.04
VPS8-220ENST00000469713 HIKESHIQ53FT3 197 aa2.29□□□□□ -2.04
VPS8-220ENST00000469713 IGFL1Q6UW32 110 aa2.29□□□□□ -2.04
VPS8-220ENST00000469713 RTL4Q6ZR62 310 aa2.29□□□□□ -2.04
VPS8-220ENST00000469713 KRTAP5-5Q701N2 237 aaPredicted RBP2.29□□□□□ -2.04
VPS8-220ENST00000469713 CMTM8Q8IZV2 173 aa2.29□□□□□ -2.04
VPS8-220ENST00000469713 INO80EQ8NBZ0 244 aaPredicted RBP2.29□□□□□ -2.04
VPS8-220ENST00000469713 OR1J4Q8NGS1 313 aa2.29□□□□□ -2.04
VPS8-220ENST00000469713 C17orf50Q8WW18 174 aa2.29□□□□□ -2.04
VPS8-220ENST00000469713 SLC25A46Q96AG3 418 aa2.29□□□□□ -2.04
VPS8-220ENST00000469713 CDX2Q99626 313 aaPredicted RBP2.29□□□□□ -2.04
VPS8-220ENST00000469713 GPR21Q99679 349 aa2.29□□□□□ -2.04
VPS8-220ENST00000469713 SCRT1Q9BWW7 348 aa2.29□□□□□ -2.04
VPS8-220ENST00000469713 ING2Q9H160 280 aa2.29□□□□□ -2.04
VPS8-220ENST00000469713 NCOR1P1Q9H4R4 102 aa2.29□□□□□ -2.04
VPS8-220ENST00000469713 ZNF442Q9H7R0 627 aa2.29□□□□□ -2.04
VPS8-220ENST00000469713 ZC4H2Q9NQZ6 224 aa2.29□□□□□ -2.04
VPS8-220ENST00000469713 MCUBQ9NWR8 336 aa2.29□□□□□ -2.04
VPS8-220ENST00000469713 ENOPH1Q9UHY7 261 aa2.29□□□□□ -2.04
VPS8-220ENST00000469713 PSME2Q9UL46 239 aa2.29□□□□□ -2.04
VPS8-220ENST00000469713 RHBDD3Q9Y3P4 386 aa2.29□□□□□ -2.04
VPS8-220ENST00000469713 IGLV3-12A0A075B6K2 115 aa2.28□□□□□ -2.04
VPS8-220ENST00000469713 TRAV6A0A075B6T7 132 aa2.28□□□□□ -2.04
VPS8-220ENST00000469713 IGHV7-4-1A0A0J9YVY3 117 aa2.28□□□□□ -2.04
VPS8-220ENST00000469713 GOLGA6L7A0A1B0GV03 622 aa2.28□□□□□ -2.04
VPS8-220ENST00000469713 RPL36A-HNRNPH2H7BZ11 118 aa2.28□□□□□ -2.04
VPS8-220ENST00000469713 TNFRSF11BO00300 401 aa2.28□□□□□ -2.04
VPS8-220ENST00000469713 RAD1O60671 282 aa2.28□□□□□ -2.04
VPS8-220ENST00000469713 MPDU1O75352 247 aa2.28□□□□□ -2.04
VPS8-220ENST00000469713 IL4P05112 153 aa2.28□□□□□ -2.04
VPS8-220ENST00000469713 MYL9P24844 172 aa2.28□□□□□ -2.04
VPS8-220ENST00000469713 HTR1DP28221 377 aa2.28□□□□□ -2.04
VPS8-220ENST00000469713 ATP6V0D1P61421 351 aa2.28□□□□□ -2.04
VPS8-220ENST00000469713 RAB11AP62491 216 aa2.28□□□□□ -2.04
VPS8-220ENST00000469713 PPIDQ08752 370 aaKnown RBP2.28□□□□□ -2.04
VPS8-220ENST00000469713 DNAJC3Q13217 504 aa2.28□□□□□ -2.04
VPS8-220ENST00000469713 PNOCQ13519 176 aa2.28□□□□□ -2.04
VPS8-220ENST00000469713 TFDP2Q14188 446 aa2.28□□□□□ -2.04
VPS8-220ENST00000469713 RAB11BQ15907 218 aa2.28□□□□□ -2.04
VPS8-220ENST00000469713 TTC19Q6DKK2 380 aaPredicted RBP2.28□□□□□ -2.04
VPS8-220ENST00000469713 RWDD4Q6NW29 188 aaKnown RBP2.28□□□□□ -2.04
VPS8-220ENST00000469713 SLC25A34Q6PIV7 304 aa2.28□□□□□ -2.04
VPS8-220ENST00000469713 NEGR1Q7Z3B1 354 aa2.28□□□□□ -2.04
VPS8-220ENST00000469713 UNC93AQ86WB7 457 aa2.28□□□□□ -2.04
VPS8-220ENST00000469713 MYOCDQ8IZQ8 938 aa2.28□□□□□ -2.04
VPS8-220ENST00000469713 TRAM1L1Q8N609 369 aa2.28□□□□□ -2.04
VPS8-220ENST00000469713 C19orf18Q8NEA5 215 aa2.28□□□□□ -2.04
VPS8-220ENST00000469713 OR13G1Q8NGZ3 307 aa2.28□□□□□ -2.04
VPS8-220ENST00000469713 ITFG1Q8TB96 612 aa2.28□□□□□ -2.04
VPS8-220ENST00000469713 GHSRQ92847 366 aa2.28□□□□□ -2.04
VPS8-220ENST00000469713 NAA50Q9GZZ1 169 aaKnown RBP2.28□□□□□ -2.04
VPS8-220ENST00000469713 DEFB129Q9H1M3 183 aa2.28□□□□□ -2.04
VPS8-220ENST00000469713 EXOSC4Q9NPD3 245 aaKnown RBP2.28□□□□□ -2.04
VPS8-220ENST00000469713 SIGLEC9Q9Y336 463 aa2.28□□□□□ -2.04
VPS8-220ENST00000469713 S4R3C0 116 aa2.28□□□□□ -2.04
VPS8-220ENST00000469713 AHDC1Q5TGY3 1603 aaPredicted RBP2.28□□□□□ -2.05
VPS8-220ENST00000469713 SCN1AP35498 2009 aa2.27□□□□□ -2.05
VPS8-220ENST00000469713 IGKV6-21A0A0C4DH24 114 aa2.27□□□□□ -2.05
VPS8-220ENST00000469713 CENPVL3A0A0U1RRI6 287 aa2.27□□□□□ -2.05
VPS8-220ENST00000469713 SERPINE3A8MV23 424 aa2.27□□□□□ -2.05
VPS8-220ENST00000469713 ZNF99A8MXY4 864 aaPredicted RBP2.27□□□□□ -2.05
VPS8-220ENST00000469713 K7EM74 188 aa2.27□□□□□ -2.05
VPS8-220ENST00000469713 EIF1BO60739 113 aaKnown RBP2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms