RNA–Protein interactions for RNA: ENST00000469694.5

GPC1-208, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 2,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-208ENST00000469694 FRG2CA6NGY1 282 aa12.38□□□□□ -0.43
GPC1-208ENST00000469694 EEF1E1-BLOC1S5C9J1V9 151 aa12.38□□□□□ -0.43
GPC1-208ENST00000469694 FAM157AC9JC47 383 aa12.38□□□□□ -0.43
GPC1-208ENST00000469694 GPR37O15354 613 aa12.38□□□□□ -0.43
GPC1-208ENST00000469694 TOX3O15405 576 aaPredicted RBP12.38□□□□□ -0.43
GPC1-208ENST00000469694 CCL4P13236 92 aa12.38□□□□□ -0.43
GPC1-208ENST00000469694 ZNF28P17035 718 aa12.38□□□□□ -0.43
GPC1-208ENST00000469694 PLCXD2Q0VAA5 305 aa12.38□□□□□ -0.43
GPC1-208ENST00000469694 SKP2Q13309 424 aa12.38□□□□□ -0.43
GPC1-208ENST00000469694 DHRS11Q6UWP2 260 aa12.38□□□□□ -0.43
GPC1-208ENST00000469694 FAM3DQ96BQ1 224 aa12.38□□□□□ -0.43
GPC1-208ENST00000469694 RRNAD1Q96FB5 475 aaKnown RBP12.38□□□□□ -0.43
GPC1-208ENST00000469694 TSSK2Q96PF2 358 aa12.38□□□□□ -0.43
GPC1-208ENST00000469694 PHB2Q99623 299 aa12.38□□□□□ -0.43
GPC1-208ENST00000469694 RNF126Q9BV68 326 aa12.38□□□□□ -0.43
GPC1-208ENST00000469694 NMNAT2Q9BZQ4 307 aa12.38□□□□□ -0.43
GPC1-208ENST00000469694 CHMP1AQ9HD42 196 aaPredicted RBP12.38□□□□□ -0.43
GPC1-208ENST00000469694 MRM2Q9UI43 246 aaKnown RBP12.38□□□□□ -0.43
GPC1-208ENST00000469694 FARSAQ9Y285 508 aaKnown RBP12.38□□□□□ -0.43
GPC1-208ENST00000469694 LOC100289279A0A1B0GTE1 492 aa12.37□□□□□ -0.43
GPC1-208ENST00000469694 A6NLC8 198 aa12.37□□□□□ -0.43
GPC1-208ENST00000469694 M0R296 226 aa12.37□□□□□ -0.43
GPC1-208ENST00000469694 HEXBP07686 556 aa12.37□□□□□ -0.43
GPC1-208ENST00000469694 FCGR3AP08637 254 aa12.37□□□□□ -0.43
GPC1-208ENST00000469694 LAP3P28838 519 aa12.37□□□□□ -0.43
GPC1-208ENST00000469694 IL12BP29460 328 aa12.37□□□□□ -0.43
GPC1-208ENST00000469694 LINC01590Q5TEZ4 76 aa12.37□□□□□ -0.43
GPC1-208ENST00000469694 FNDC7Q5VTL7 733 aa12.37□□□□□ -0.43
GPC1-208ENST00000469694 FAM220AQ7Z4H9 259 aa12.37□□□□□ -0.43
GPC1-208ENST00000469694 DTWD2Q8NBA8 298 aa12.37□□□□□ -0.43
GPC1-208ENST00000469694 OR10AC1Q8NH08 325 aa12.37□□□□□ -0.43
GPC1-208ENST00000469694 NAT6Q93015 286 aa12.37□□□□□ -0.43
GPC1-208ENST00000469694 RASD2Q96D21 266 aa12.37□□□□□ -0.43
GPC1-208ENST00000469694 CST11Q9H112 138 aa12.37□□□□□ -0.43
GPC1-208ENST00000469694 SDHAF3Q9NRP4 125 aa12.37□□□□□ -0.43
GPC1-208ENST00000469694 ZNF736B4DX44 427 aaPredicted RBP12.37□□□□□ -0.43
GPC1-208ENST00000469694 HCRTR2O43614 444 aa12.37□□□□□ -0.43
GPC1-208ENST00000469694 LY86O95711 162 aa12.37□□□□□ -0.43
GPC1-208ENST00000469694 CYB5AP00167 134 aa12.37□□□□□ -0.43
GPC1-208ENST00000469694 RAB5AP20339 215 aa12.37□□□□□ -0.43
GPC1-208ENST00000469694 IL13RA1P78552 427 aa12.37□□□□□ -0.43
GPC1-208ENST00000469694 TGIF1Q15583 401 aa12.37□□□□□ -0.43
GPC1-208ENST00000469694 NKPD1Q17RQ9 610 aa12.37□□□□□ -0.43
GPC1-208ENST00000469694 LINC00114Q6XXX2 140 aa12.37□□□□□ -0.43
GPC1-208ENST00000469694 PPP1R3BQ86XI6 285 aa12.37□□□□□ -0.43
GPC1-208ENST00000469694 OR51A4Q8NGJ6 313 aa12.37□□□□□ -0.43
GPC1-208ENST00000469694 ADAMTS17Q8TE56 1095 aa12.37□□□□□ -0.43
GPC1-208ENST00000469694 SULT4A1Q9BR01 284 aa12.37□□□□□ -0.43
GPC1-208ENST00000469694 TOLLIPQ9H0E2 274 aa12.37□□□□□ -0.43
GPC1-208ENST00000469694 RXFP3Q9NSD7 469 aa12.37□□□□□ -0.43
GPC1-208ENST00000469694 ASPMQ8IZT6 3477 aa12.37□□□□□ -0.43
GPC1-208ENST00000469694 TMEM72A0PK05 275 aa12.36□□□□□ -0.43
GPC1-208ENST00000469694 OR4C45A6NMZ5 311 aa12.36□□□□□ -0.43
GPC1-208ENST00000469694 GLCEO94923 617 aa12.36□□□□□ -0.43
GPC1-208ENST00000469694 SLC34A2O95436 690 aa12.36□□□□□ -0.43
GPC1-208ENST00000469694 CD80P33681 288 aa12.36□□□□□ -0.43
GPC1-208ENST00000469694 GLP1RP43220 463 aa12.36□□□□□ -0.43
GPC1-208ENST00000469694 CLDN6P56747 220 aa12.36□□□□□ -0.43
GPC1-208ENST00000469694 ZNF117Q03924 483 aa12.36□□□□□ -0.43
GPC1-208ENST00000469694 SQSTM1Q13501 440 aa12.36□□□□□ -0.43
GPC1-208ENST00000469694 HYAL4Q2M3T9 481 aa12.36□□□□□ -0.43
GPC1-208ENST00000469694 PEAR1Q5VY43 1037 aaPredicted RBP12.36□□□□□ -0.43
GPC1-208ENST00000469694 ZSCAN4Q8NAM6 433 aaPredicted RBP12.36□□□□□ -0.43
GPC1-208ENST00000469694 MCHR2Q969V1 340 aa12.36□□□□□ -0.43
GPC1-208ENST00000469694 ARRDC1-AS1Q9H2J1 176 aa12.36□□□□□ -0.43
GPC1-208ENST00000469694 SLCO5A1Q9H2Y9 848 aa12.36□□□□□ -0.43
GPC1-208ENST00000469694 KLHDC2Q9Y2U9 406 aa12.36□□□□□ -0.43
GPC1-208ENST00000469694 WIF1Q9Y5W5 379 aa12.36□□□□□ -0.43
GPC1-208ENST00000469694 KIF26BQ2KJY2 2108 aa12.36□□□□□ -0.43
GPC1-208ENST00000469694 IGKV1D-42A0A075B6H8 117 aa12.36□□□□□ -0.43
GPC1-208ENST00000469694 A0A087WUJ7 227 aa12.36□□□□□ -0.43
GPC1-208ENST00000469694 TVP23AA6NH52 213 aa12.36□□□□□ -0.43
GPC1-208ENST00000469694 ZNF264O43296 627 aa12.36□□□□□ -0.43
GPC1-208ENST00000469694 FBXO24O75426 580 aa12.36□□□□□ -0.43
GPC1-208ENST00000469694 ZNF432O94892 652 aa12.36□□□□□ -0.43
GPC1-208ENST00000469694 NUDT14O95848 222 aa12.36□□□□□ -0.43
GPC1-208ENST00000469694 ABHD16AO95870 558 aa12.36□□□□□ -0.43
GPC1-208ENST00000469694 CD2P06729 351 aa12.36□□□□□ -0.43
GPC1-208ENST00000469694 RPS27P42677 84 aaKnown RBP12.36□□□□□ -0.43
GPC1-208ENST00000469694 SLC6A9P48067 706 aa12.36□□□□□ -0.43
GPC1-208ENST00000469694 BIKQ13323 160 aa12.36□□□□□ -0.43
GPC1-208ENST00000469694 TOMM20Q15388 145 aa12.36□□□□□ -0.43
GPC1-208ENST00000469694 RAB11BQ15907 218 aa12.36□□□□□ -0.43
GPC1-208ENST00000469694 KRBOX4Q5JUW0 171 aa12.36□□□□□ -0.43
GPC1-208ENST00000469694 RABEPKQ7Z6M1 372 aa12.36□□□□□ -0.43
GPC1-208ENST00000469694 ZNF511Q8NB15 262 aa12.36□□□□□ -0.43
GPC1-208ENST00000469694 APCDD1LQ8NCL9 501 aa12.36□□□□□ -0.43
GPC1-208ENST00000469694 ISOC2Q96AB3 205 aa12.36□□□□□ -0.43
GPC1-208ENST00000469694 OPA3Q9H6K4 179 aa12.36□□□□□ -0.43
GPC1-208ENST00000469694 BLOC1S5-TXNDC5H3BN57 136 aa12.36□□□□□ -0.43
GPC1-208ENST00000469694 EIF1AYO14602 144 aaKnown RBP12.36□□□□□ -0.43
GPC1-208ENST00000469694 EIF1AXP47813 144 aaKnown RBP12.36□□□□□ -0.43
GPC1-208ENST00000469694 ODF4Q2M2E3 257 aa12.36□□□□□ -0.43
GPC1-208ENST00000469694 KCTD9Q7L273 389 aa12.36□□□□□ -0.43
GPC1-208ENST00000469694 ANKRD37Q7Z713 158 aa12.36□□□□□ -0.43
GPC1-208ENST00000469694 GPR148Q8TDV2 347 aa12.36□□□□□ -0.43
GPC1-208ENST00000469694 KIRREL1Q96J84 757 aa12.36□□□□□ -0.43
GPC1-208ENST00000469694 AKR1E2Q96JD6 320 aa12.36□□□□□ -0.43
GPC1-208ENST00000469694 ADAD1Q96M93 576 aaKnown RBP12.36□□□□□ -0.43
GPC1-208ENST00000469694 MOGAT1Q96PD6 335 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms