RNA–Protein interactions for RNA: ENST00000468600.1

SSB-208, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-208ENST00000468600 CSDC2Q9Y534 153 aaKnown RBP0.36□□□□□ -2.35
SSB-208ENST00000468600 COL6A6A6NMZ7 2263 aa0.36□□□□□ -2.35
SSB-208ENST00000468600 MED13Q9UHV7 2174 aa0.36□□□□□ -2.35
SSB-208ENST00000468600 GGTLC3B5MD39 225 aa0.35□□□□□ -2.35
SSB-208ENST00000468600 K7EPI3 171 aa0.35□□□□□ -2.35
SSB-208ENST00000468600 SLC31A1O15431 190 aa0.35□□□□□ -2.35
SSB-208ENST00000468600 CT45A6P0DMU7 189 aa0.35□□□□□ -2.35
SSB-208ENST00000468600 CT45A5P0DMU8 189 aa0.35□□□□□ -2.35
SSB-208ENST00000468600 CT45A7P0DMV0 189 aa0.35□□□□□ -2.35
SSB-208ENST00000468600 THRAP10827 490 aa0.35□□□□□ -2.35
SSB-208ENST00000468600 TAS2R46P59540 309 aa0.35□□□□□ -2.35
SSB-208ENST00000468600 CT45A1Q5HYN5 189 aa0.35□□□□□ -2.35
SSB-208ENST00000468600 MRPL2Q5T653 305 aaKnown RBP0.35□□□□□ -2.35
SSB-208ENST00000468600 N4BP2L1Q5TBK1 243 aaPredicted RBP0.35□□□□□ -2.35
SSB-208ENST00000468600 Q6ZSR3 168 aa0.35□□□□□ -2.35
SSB-208ENST00000468600 CT45A3Q8NHU0 189 aa0.35□□□□□ -2.35
SSB-208ENST00000468600 OR5P3Q8WZ94 311 aa0.35□□□□□ -2.35
SSB-208ENST00000468600 HAUS1Q96CS2 278 aa0.35□□□□□ -2.35
SSB-208ENST00000468600 KCNS3Q9BQ31 491 aa0.35□□□□□ -2.35
SSB-208ENST00000468600 CR1P17927 2039 aa0.35□□□□□ -2.35
SSB-208ENST00000468600 BAZ1BQ9UIG0 1483 aaKnown RBP0.35□□□□□ -2.35
SSB-208ENST00000468600 OR52A4PA6NMU1 304 aa0.34□□□□□ -2.36
SSB-208ENST00000468600 NRASP01111 189 aa0.34□□□□□ -2.36
SSB-208ENST00000468600 HRASP01112 189 aa0.34□□□□□ -2.36
SSB-208ENST00000468600 KRASP01116 189 aa0.34□□□□□ -2.36
SSB-208ENST00000468600 ARG1P05089 322 aa0.34□□□□□ -2.36
SSB-208ENST00000468600 TROVE2P10155 538 aaKnown RBP eCLIP0.34□□□□□ -2.36
SSB-208ENST00000468600 ZNF708P17019 499 aa0.34□□□□□ -2.36
SSB-208ENST00000468600 ZNF43P17038 809 aa0.34□□□□□ -2.36
SSB-208ENST00000468600 CD70P32970 193 aa0.34□□□□□ -2.36
SSB-208ENST00000468600 NSG1P42857 185 aa0.34□□□□□ -2.36
SSB-208ENST00000468600 SEC61GP60059 68 aa0.34□□□□□ -2.36
SSB-208ENST00000468600 OPN5Q6U736 354 aa0.34□□□□□ -2.36
SSB-208ENST00000468600 ZNF322Q6U7Q0 402 aaPredicted RBP0.34□□□□□ -2.36
SSB-208ENST00000468600 CERS6Q6ZMG9 384 aa0.34□□□□□ -2.36
SSB-208ENST00000468600 BBS7Q8IWZ6 715 aa0.34□□□□□ -2.36
SSB-208ENST00000468600 KMT2EQ8IZD2 1858 aa0.34□□□□□ -2.36
SSB-208ENST00000468600 RPRMLQ8N4K4 120 aa0.34□□□□□ -2.36
SSB-208ENST00000468600 CBR4Q8N4T8 237 aa0.34□□□□□ -2.36
SSB-208ENST00000468600 DRAM1Q8N682 238 aa0.34□□□□□ -2.36
SSB-208ENST00000468600 OR8K3Q8NH51 312 aa0.34□□□□□ -2.36
SSB-208ENST00000468600 APH1BQ8WW43 257 aa0.34□□□□□ -2.36
SSB-208ENST00000468600 GBF1Q92538 1859 aa0.34□□□□□ -2.36
SSB-208ENST00000468600 SLC41A3Q96GZ6 507 aa0.34□□□□□ -2.36
SSB-208ENST00000468600 ATP5SQ99766 215 aa0.34□□□□□ -2.36
SSB-208ENST00000468600 VWA8A3KMH1 1905 aa0.34□□□□□ -2.36
SSB-208ENST00000468600 PCDH11XQ9BZA7 1347 aa0.34□□□□□ -2.36
SSB-208ENST00000468600 ISPDA4D126 451 aa0.33□□□□□ -2.36
SSB-208ENST00000468600 NCBP2LA6PVI3 153 aaKnown RBP0.33□□□□□ -2.36
SSB-208ENST00000468600 AQP8O94778 261 aa0.33□□□□□ -2.36
SSB-208ENST00000468600 HNRNPH3P31942 346 aaKnown RBP0.33□□□□□ -2.36
SSB-208ENST00000468600 OR1G1P47890 313 aa0.33□□□□□ -2.36
SSB-208ENST00000468600 TMED10P49755 219 aaKnown RBP0.33□□□□□ -2.36
SSB-208ENST00000468600 STXBP1P61764 594 aaKnown RBP0.33□□□□□ -2.36
SSB-208ENST00000468600 IFITM3Q01628 133 aa0.33□□□□□ -2.36
SSB-208ENST00000468600 LIPEQ05469 1076 aa0.33□□□□□ -2.36
SSB-208ENST00000468600 PRDX4Q13162 271 aa0.33□□□□□ -2.36
SSB-208ENST00000468600 MBOAT2Q6ZWT7 520 aa0.33□□□□□ -2.36
SSB-208ENST00000468600 COMTD1Q86VU5 262 aa0.33□□□□□ -2.36
SSB-208ENST00000468600 FAM71AQ8IYT1 594 aa0.33□□□□□ -2.36
SSB-208ENST00000468600 OR6Q1Q8NGQ2 317 aa0.33□□□□□ -2.36
SSB-208ENST00000468600 OR5B3Q8NH48 314 aa0.33□□□□□ -2.36
SSB-208ENST00000468600 CCDC126Q96EE4 140 aa0.33□□□□□ -2.36
SSB-208ENST00000468600 BTN2A3PQ96KV6 586 aa0.33□□□□□ -2.36
SSB-208ENST00000468600 MS4A8Q9BY19 250 aa0.33□□□□□ -2.36
SSB-208ENST00000468600 SLIRPQ9GZT3 109 aaKnown RBP0.33□□□□□ -2.36
SSB-208ENST00000468600 RSPH9Q9H1X1 276 aaPredicted RBP0.33□□□□□ -2.36
SSB-208ENST00000468600 FBXO8Q9NRD0 319 aa0.33□□□□□ -2.36
SSB-208ENST00000468600 SNX6Q9UNH7 406 aa0.33□□□□□ -2.36
SSB-208ENST00000468600 LOXHD1Q8IVV2 1947 aa0.32□□□□□ -2.36
SSB-208ENST00000468600 IGKV1OR2-108A0A075B7D4 117 aa0.32□□□□□ -2.36
SSB-208ENST00000468600 IGKV1-6A0A0C4DH72 117 aa0.32□□□□□ -2.36
SSB-208ENST00000468600 C19orf71A6NCJ1 209 aa0.32□□□□□ -2.36
SSB-208ENST00000468600 A6NDN8 102 aa0.32□□□□□ -2.36
SSB-208ENST00000468600 H7C1H1 209 aa0.32□□□□□ -2.36
SSB-208ENST00000468600 RAD51CO43502 376 aa0.32□□□□□ -2.36
SSB-208ENST00000468600 RAD1O60671 282 aa0.32□□□□□ -2.36
SSB-208ENST00000468600 SMPD2O60906 423 aa0.32□□□□□ -2.36
SSB-208ENST00000468600 FARS2O95363 451 aaKnown RBP0.32□□□□□ -2.36
SSB-208ENST00000468600 IGHV3-53P01767 116 aa0.32□□□□□ -2.36
SSB-208ENST00000468600 OR5AC1P0C628 307 aa0.32□□□□□ -2.36
SSB-208ENST00000468600 GZMHP20718 246 aa0.32□□□□□ -2.36
SSB-208ENST00000468600 IL32P24001 234 aa0.32□□□□□ -2.36
SSB-208ENST00000468600 BMI1P35226 326 aa0.32□□□□□ -2.36
SSB-208ENST00000468600 CEBPDP49716 269 aaPredicted RBP0.32□□□□□ -2.36
SSB-208ENST00000468600 PLP1P60201 277 aa0.32□□□□□ -2.36
SSB-208ENST00000468600 SEMG2Q02383 582 aa0.32□□□□□ -2.36
SSB-208ENST00000468600 CUL2Q13617 745 aa0.32□□□□□ -2.36
SSB-208ENST00000468600 MBOAT1Q6ZNC8 495 aa0.32□□□□□ -2.36
SSB-208ENST00000468600 ZNF567Q8N184 647 aa0.32□□□□□ -2.36
SSB-208ENST00000468600 ZFP62Q8NB50 900 aaPredicted RBP0.32□□□□□ -2.36
SSB-208ENST00000468600 UBAC2Q8NBM4 344 aa0.32□□□□□ -2.36
SSB-208ENST00000468600 RXFP4Q8TDU9 374 aa0.32□□□□□ -2.36
SSB-208ENST00000468600 RRAGDQ9NQL2 400 aaPredicted RBP0.32□□□□□ -2.36
SSB-208ENST00000468600 DDX19BQ9UMR2 479 aa0.32□□□□□ -2.36
SSB-208ENST00000468600 COMMD3-BMI1R4GMX3 469 aa0.32□□□□□ -2.36
SSB-208ENST00000468600 DYSFO75923 2080 aa0.31□□□□□ -2.36
SSB-208ENST00000468600 SYCE1LA8MT33 242 aa0.31□□□□□ -2.36
SSB-208ENST00000468600 C9JVG2 144 aa0.31□□□□□ -2.36
SSB-208ENST00000468600 PEX11AO75192 247 aa0.31□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms