RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 PCDHGB1Q9Y5G3 927 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 CACNA1AO00555 2505 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 FRYQ5TBA9 3013 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 FREM2Q5SZK8 3169 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 ANKRD11Q6UB99 2663 aaPredicted RBP3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 SVILO95425 2214 aa3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 ALPK2Q86TB3 2170 aa3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 NKX2-6A6NCS4 301 aa3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 CCDC160A6NGH7 325 aa3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 METTL15A6NJ78 407 aa3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 PRR32B1ATL7 298 aa3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 E9PI62 339 aa3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 F5H5K5 113 aa3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 RPL36A-HNRNPH2H7BZ11 118 aa3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 J3QRE1 110 aa3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 PHYHO14832 338 aa3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 MRPS14O60783 128 aaKnown RBP3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 CGAP01215 116 aa3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 PTHP01270 115 aa3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 HLA-HP01893 362 aa3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 KRT8P05787 483 aa3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 CRHP06850 196 aa3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 HTR1AP08908 422 aa3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 CST2P09228 141 aa3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 TACSTD2P09758 323 aa3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 LIMS3P0CW19 117 aa3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 LIMS4P0CW20 117 aa3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 SMIM18P0DKX4 95 aa3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 PSKH1P11801 424 aa3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 PIPP12273 146 aaPredicted RBP3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 CCL2P13500 99 aa3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 ZNF32P17041 273 aa3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 ALOX5APP20292 161 aa3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 IL32P24001 234 aa3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 HSD11B1P28845 292 aa3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 MPGP29372 298 aa3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 SERPINF1P36955 418 aa3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 GTF2A1P52655 376 aaPredicted RBP3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 RIDAP52758 137 aaKnown RBP3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 GBX2P52951 348 aaPredicted RBP3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 LSM6P62312 80 aaKnown RBP3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 ACTC1P68032 377 aa3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 ACTA1P68133 377 aa3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 MRPS34P82930 218 aaKnown RBP3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 CFHR3Q02985 330 aa3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 TGFBR3Q03167 851 aa3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 SLC3A1Q07837 685 aa3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 FAM27E3Q08E93 113 aa3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 GTF3C1Q12789 2109 aa3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 ENDOGQ14249 297 aaKnown RBP3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 GGTLC2Q14390 218 aa3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 TSTQ16762 297 aaKnown RBP3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 C4orf46Q504U0 113 aa3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 CCDC92Q53HC0 331 aaPredicted RBP3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 SOWAHCQ53LP3 525 aaPredicted RBP3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 ARMCX4Q5H9R4 360 aa3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 FAM27BQ5VT28 67 aa3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 OR7E24Q6IFN5 339 aa3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 CCDC144NLQ6NUI1 221 aa3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 ZNF774Q6NX45 483 aa3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 TMEM53Q6P2H8 277 aa3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 KCTD18Q6PI47 426 aaPredicted RBP3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 ZNF474Q6S9Z5 364 aaPredicted RBP3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 LRRN1Q6UXK5 716 aa3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 BHLHA15Q7RTS1 189 aaPredicted RBP3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 FAM220AQ7Z4H9 259 aa3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 ZNF843Q8N446 348 aa3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 ZNF433Q8N7K0 673 aaPredicted RBP3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 ZNF283Q8N7M2 679 aa3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 GJC3Q8NFK1 279 aa3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 OR1K1Q8NGR3 316 aa3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 OR52N5Q8NH56 324 aa3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 OTOSQ8NHW6 89 aa3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 SLC7A6Q92536 515 aa3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 BCL2L2Q92843 193 aaPredicted RBP3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 NABP1Q96AH0 204 aa3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 SLAMF6Q96DU3 332 aa3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 FBXO17Q96EF6 278 aa3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 MRPL48Q96GC5 212 aaKnown RBP3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 ZC3HAV1LQ96H79 300 aaKnown RBP3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 C4orf36Q96KX1 117 aa3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 ZFP3Q96NJ6 502 aa3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 FYTTD1Q96QD9 318 aaKnown RBP3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 ABHD6Q9BV23 337 aa3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 SFXN3Q9BWM7 321 aa3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 MND1Q9BWT6 205 aa3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 CDCA4Q9BXL8 241 aa3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 MROQ9BYG7 248 aa3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 MARCH7Q9H992 704 aa3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 ACOT13Q9NPJ3 140 aa3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 BABAM2Q9NXR7 383 aa3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 GAR1Q9NY12 217 aaKnown RBP3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 PLEK2Q9NYT0 353 aa3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 COQ3Q9NZJ6 369 aa3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 MRM2Q9UI43 246 aaKnown RBP3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 ERRFI1Q9UJM3 462 aaPredicted RBP3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 CAB39Q9Y376 341 aaPredicted RBP3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 GRIP1Q9Y3R0 1128 aa3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 TIMM10BQ9Y5J6 103 aa3.54□□□□□ -1.84
TMEM39A-204ENST00000468545 LHFPL6Q9Y693 200 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms