RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 FAM3AP98173 230 aa16.97■□□□□ 0.31
NPHP4-206ENST00000468253 SNCBQ16143 134 aa16.97■□□□□ 0.31
NPHP4-206ENST00000468253 TIGD6Q17RP2 521 aa16.97■□□□□ 0.31
NPHP4-206ENST00000468253 LRRC36Q1X8D7 754 aa16.97■□□□□ 0.31
NPHP4-206ENST00000468253 LPCAT4Q643R3 524 aa16.97■□□□□ 0.31
NPHP4-206ENST00000468253 ENTHD1Q8IYW4 607 aa16.97■□□□□ 0.31
NPHP4-206ENST00000468253 SPERTQ8NA61 448 aa16.97■□□□□ 0.31
NPHP4-206ENST00000468253 HPS1Q92902 700 aa16.97■□□□□ 0.31
NPHP4-206ENST00000468253 REEP6Q96HR9 211 aa16.97■□□□□ 0.31
NPHP4-206ENST00000468253 APOL4Q9BPW4 351 aa16.97■□□□□ 0.31
NPHP4-206ENST00000468253 A0A0U1RQV5 110 aa16.96■□□□□ 0.31
NPHP4-206ENST00000468253 ERICH4A6NGS2 130 aa16.96■□□□□ 0.31
NPHP4-206ENST00000468253 J3QRE1 110 aa16.96■□□□□ 0.31
NPHP4-206ENST00000468253 TBX1O43435 398 aa16.96■□□□□ 0.31
NPHP4-206ENST00000468253 CDC14BO60729 498 aa16.96■□□□□ 0.31
NPHP4-206ENST00000468253 HEXAP06865 529 aa16.96■□□□□ 0.31
NPHP4-206ENST00000468253 ANOS1P23352 680 aa16.96■□□□□ 0.31
NPHP4-206ENST00000468253 TMEM249Q2WGJ8 235 aa16.96■□□□□ 0.31
NPHP4-206ENST00000468253 ZNF829Q3KNS6 432 aaPredicted RBP16.96■□□□□ 0.31
NPHP4-206ENST00000468253 ZNF684Q5T5D7 378 aa16.96■□□□□ 0.31
NPHP4-206ENST00000468253 MAPK1IP1LQ8NDC0 245 aa16.96■□□□□ 0.31
NPHP4-206ENST00000468253 ERGIC1Q969X5 290 aa16.96■□□□□ 0.31
NPHP4-206ENST00000468253 SMR3AQ99954 134 aa16.96■□□□□ 0.31
NPHP4-206ENST00000468253 FAM206AQ9NX38 181 aa16.96■□□□□ 0.31
NPHP4-206ENST00000468253 IKZF2Q9UKS7 526 aa16.96■□□□□ 0.31
NPHP4-206ENST00000468253 EXOGQ9Y2C4 368 aaKnown RBP16.96■□□□□ 0.31
NPHP4-206ENST00000468253 ABCA1O95477 2261 aa16.95■□□□□ 0.3
NPHP4-206ENST00000468253 IGHV4-61A0A0C4DH41 118 aa16.95■□□□□ 0.3
NPHP4-206ENST00000468253 A0A1W2PQL4 384 aaPredicted RBP16.95■□□□□ 0.3
NPHP4-206ENST00000468253 PRR32B1ATL7 298 aa16.95■□□□□ 0.3
NPHP4-206ENST00000468253 MLNRO43193 412 aa16.95■□□□□ 0.3
NPHP4-206ENST00000468253 PPIHO43447 177 aaKnown RBP16.95■□□□□ 0.3
NPHP4-206ENST00000468253 PEX2P28328 305 aa16.95■□□□□ 0.3
NPHP4-206ENST00000468253 GSK3AP49840 483 aa16.95■□□□□ 0.3
NPHP4-206ENST00000468253 CHN2P52757 468 aa16.95■□□□□ 0.3
NPHP4-206ENST00000468253 SLC34A1Q06495 639 aa16.95■□□□□ 0.3
NPHP4-206ENST00000468253 KRT74Q7RTS7 529 aa16.95■□□□□ 0.3
NPHP4-206ENST00000468253 KCTD20Q7Z5Y7 419 aa16.95■□□□□ 0.3
NPHP4-206ENST00000468253 DHRSXQ8N5I4 330 aa16.95■□□□□ 0.3
NPHP4-206ENST00000468253 PLPP7Q8NBV4 271 aa16.95■□□□□ 0.3
NPHP4-206ENST00000468253 BHLHE23Q8NDY6 225 aa16.95■□□□□ 0.3
NPHP4-206ENST00000468253 CSNK2A3Q8NEV1 391 aa16.95■□□□□ 0.3
NPHP4-206ENST00000468253 CCL17Q92583 94 aa16.95■□□□□ 0.3
NPHP4-206ENST00000468253 RAB1CQ92928 201 aa16.95■□□□□ 0.3
NPHP4-206ENST00000468253 MEGF10Q96KG7 1140 aa16.95■□□□□ 0.3
NPHP4-206ENST00000468253 OR2V2Q96R30 315 aa16.95■□□□□ 0.3
NPHP4-206ENST00000468253 MYCBPQ99417 103 aaPredicted RBP16.95■□□□□ 0.3
NPHP4-206ENST00000468253 BRD7Q9NPI1 651 aa16.95■□□□□ 0.3
NPHP4-206ENST00000468253 MRPS18AQ9NVS2 196 aaKnown RBP16.95■□□□□ 0.3
NPHP4-206ENST00000468253 MRM2Q9UI43 246 aaKnown RBP16.95■□□□□ 0.3
NPHP4-206ENST00000468253 HIVEP2P31629 2446 aa16.95■□□□□ 0.3
NPHP4-206ENST00000468253 SETD2Q9BYW2 2564 aaPredicted RBP16.94■□□□□ 0.3
NPHP4-206ENST00000468253 hCG_38984A0A1B0GV85 526 aa16.94■□□□□ 0.3
NPHP4-206ENST00000468253 METTL15A6NJ78 407 aa16.94■□□□□ 0.3
NPHP4-206ENST00000468253 CLDN25C9JDP6 229 aa16.94■□□□□ 0.3
NPHP4-206ENST00000468253 KRT8P05787 483 aa16.94■□□□□ 0.3
NPHP4-206ENST00000468253 ATP6V1B1P15313 513 aa16.94■□□□□ 0.3
NPHP4-206ENST00000468253 GATA4P43694 442 aa16.94■□□□□ 0.3
NPHP4-206ENST00000468253 GZMKP49863 264 aa16.94■□□□□ 0.3
NPHP4-206ENST00000468253 ACTC1P68032 377 aa16.94■□□□□ 0.3
NPHP4-206ENST00000468253 ACTA1P68133 377 aa16.94■□□□□ 0.3
NPHP4-206ENST00000468253 ADARB1P78563 741 aaKnown RBP16.94■□□□□ 0.3
NPHP4-206ENST00000468253 MZT1Q08AG7 82 aa16.94■□□□□ 0.3
NPHP4-206ENST00000468253 OR8B8Q15620 311 aa16.94■□□□□ 0.3
NPHP4-206ENST00000468253 SPRNQ5BIV9 151 aa16.94■□□□□ 0.3
NPHP4-206ENST00000468253 PLEKHG7Q6ZR37 379 aa16.94■□□□□ 0.3
NPHP4-206ENST00000468253 OR10H4Q8NGA5 316 aa16.94■□□□□ 0.3
NPHP4-206ENST00000468253 ITLN1Q8WWA0 313 aa16.94■□□□□ 0.3
NPHP4-206ENST00000468253 RNFT2Q96EX2 444 aa16.94■□□□□ 0.3
NPHP4-206ENST00000468253 TIMD4Q96H15 378 aa16.94■□□□□ 0.3
NPHP4-206ENST00000468253 C1orf159Q96HA4 380 aa16.94■□□□□ 0.3
NPHP4-206ENST00000468253 PBOV1Q9GZY1 135 aa16.94■□□□□ 0.3
NPHP4-206ENST00000468253 GCM1Q9NP62 436 aa16.94■□□□□ 0.3
NPHP4-206ENST00000468253 NUFIP1Q9UHK0 495 aaKnown RBP16.94■□□□□ 0.3
NPHP4-206ENST00000468253 PPP1R3CQ9UQK1 317 aa16.94■□□□□ 0.3
NPHP4-206ENST00000468253 NIPBLQ6KC79 2804 aaeCLIP16.94■□□□□ 0.3
NPHP4-206ENST00000468253 ANKRD30BLA7E2S9 258 aa16.93■□□□□ 0.3
NPHP4-206ENST00000468253 H0YAE9 185 aa16.93■□□□□ 0.3
NPHP4-206ENST00000468253 H0YL77 283 aa16.93■□□□□ 0.3
NPHP4-206ENST00000468253 PSMD9O00233 223 aa16.93■□□□□ 0.3
NPHP4-206ENST00000468253 CD5LO43866 347 aa16.93■□□□□ 0.3
NPHP4-206ENST00000468253 SRSF10O75494 262 aaKnown RBP16.93■□□□□ 0.3
NPHP4-206ENST00000468253 PTBP3O95758 552 aaKnown RBP16.93■□□□□ 0.3
NPHP4-206ENST00000468253 CA6P23280 308 aa16.93■□□□□ 0.3
NPHP4-206ENST00000468253 CD200P41217 278 aa16.93■□□□□ 0.3
NPHP4-206ENST00000468253 KRTAP1-1Q07627 177 aa16.93■□□□□ 0.3
NPHP4-206ENST00000468253 IL18R1Q13478 541 aa16.93■□□□□ 0.3
NPHP4-206ENST00000468253 ZNF181Q2M3W8 571 aa16.93■□□□□ 0.3
NPHP4-206ENST00000468253 CYB5R2Q6BCY4 276 aa16.93■□□□□ 0.3
NPHP4-206ENST00000468253 PEG10Q86TG7 708 aaKnown RBP16.93■□□□□ 0.3
NPHP4-206ENST00000468253 FTMTQ8N4E7 242 aa16.93■□□□□ 0.3
NPHP4-206ENST00000468253 OR8B12Q8NGG6 310 aa16.93■□□□□ 0.3
NPHP4-206ENST00000468253 OR56B2PQ8NGI1 322 aa16.93■□□□□ 0.3
NPHP4-206ENST00000468253 SIGLEC11Q96RL6 698 aa16.93■□□□□ 0.3
NPHP4-206ENST00000468253 VCXQ9H320 206 aa16.93■□□□□ 0.3
NPHP4-206ENST00000468253 MOB1AQ9H8S9 216 aa16.93■□□□□ 0.3
NPHP4-206ENST00000468253 TMEM106BQ9NUM4 274 aa16.93■□□□□ 0.3
NPHP4-206ENST00000468253 RPL36Q9Y3U8 105 aaKnown RBP16.93■□□□□ 0.3
NPHP4-206ENST00000468253 SNX5Q9Y5X3 404 aa16.93■□□□□ 0.3
NPHP4-206ENST00000468253 R4GMQ9 66 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms