RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 PLPP7Q8NBV4 271 aa16.01■□□□□ 0.15
COL7A1-207ENST00000467985 Q8TCH9 128 aa16.01■□□□□ 0.15
COL7A1-207ENST00000467985 PLEKHA8Q96JA3 519 aa16.01■□□□□ 0.15
COL7A1-207ENST00000467985 MRI1Q9BV20 369 aa16.01■□□□□ 0.15
COL7A1-207ENST00000467985 TOR3AQ9H497 397 aa16.01■□□□□ 0.15
COL7A1-207ENST00000467985 ZNF556Q9HAH1 456 aa16.01■□□□□ 0.15
COL7A1-207ENST00000467985 CENPMQ9NSP4 180 aa16.01■□□□□ 0.15
COL7A1-207ENST00000467985 MRPL15Q9P015 296 aaKnown RBP16.01■□□□□ 0.15
COL7A1-207ENST00000467985 PDP1Q9P0J1 537 aaPredicted RBP16.01■□□□□ 0.15
COL7A1-207ENST00000467985 ARHGAP32A7KAX9 2087 aa16.01■□□□□ 0.15
COL7A1-207ENST00000467985 GGT3PA6NGU5 568 aa16■□□□□ 0.15
COL7A1-207ENST00000467985 XRCC2O43543 280 aa16■□□□□ 0.15
COL7A1-207ENST00000467985 CLUP10909 449 aa16■□□□□ 0.15
COL7A1-207ENST00000467985 PSKH1P11801 424 aa16■□□□□ 0.15
COL7A1-207ENST00000467985 ZNF12P17014 697 aa16■□□□□ 0.15
COL7A1-207ENST00000467985 CA6P23280 308 aa16■□□□□ 0.15
COL7A1-207ENST00000467985 RBMXP38159 391 aaKnown RBP16■□□□□ 0.15
COL7A1-207ENST00000467985 PRKXP51817 358 aa16■□□□□ 0.15
COL7A1-207ENST00000467985 PRSS12P56730 875 aa16■□□□□ 0.15
COL7A1-207ENST00000467985 ZNF92Q03936 586 aa16■□□□□ 0.15
COL7A1-207ENST00000467985 ZNF154Q13106 437 aa16■□□□□ 0.15
COL7A1-207ENST00000467985 MAB21L1Q13394 359 aa16■□□□□ 0.15
COL7A1-207ENST00000467985 ZNF404Q494X3 552 aa16■□□□□ 0.15
COL7A1-207ENST00000467985 RHOUQ7L0Q8 258 aa16■□□□□ 0.15
COL7A1-207ENST00000467985 NLRC3Q7RTR2 1065 aa16■□□□□ 0.15
COL7A1-207ENST00000467985 KLBQ86Z14 1044 aa16■□□□□ 0.15
COL7A1-207ENST00000467985 ZDHHC13Q8IUH4 622 aa16■□□□□ 0.15
COL7A1-207ENST00000467985 SPERTQ8NA61 448 aa16■□□□□ 0.15
COL7A1-207ENST00000467985 DEFB108BQ8NET1 73 aa16■□□□□ 0.15
COL7A1-207ENST00000467985 OR5K1Q8NHB7 308 aa16■□□□□ 0.15
COL7A1-207ENST00000467985 INTS14Q96SY0 518 aa16■□□□□ 0.15
COL7A1-207ENST00000467985 SSBP3Q9BWW4 388 aaPredicted RBP16■□□□□ 0.15
COL7A1-207ENST00000467985 DCLRE1BQ9H816 532 aa16■□□□□ 0.15
COL7A1-207ENST00000467985 MMP26Q9NRE1 261 aa16■□□□□ 0.15
COL7A1-207ENST00000467985 PPIAL4AQ9Y536 164 aa16■□□□□ 0.15
COL7A1-207ENST00000467985 INSIG2Q9Y5U4 225 aa16■□□□□ 0.15
COL7A1-207ENST00000467985 AUP1Q9Y679 476 aa16■□□□□ 0.15
COL7A1-207ENST00000467985 IGHV3-64DA0A0J9YX35 117 aa15.99■□□□□ 0.15
COL7A1-207ENST00000467985 SAC3D1A6NKF1 404 aa15.99■□□□□ 0.15
COL7A1-207ENST00000467985 TRAPPC2LH3BP13 241 aa15.99■□□□□ 0.15
COL7A1-207ENST00000467985 TRIM77I1YAP6 450 aa15.99■□□□□ 0.15
COL7A1-207ENST00000467985 GSTT1P30711 240 aa15.99■□□□□ 0.15
COL7A1-207ENST00000467985 SEC61A1P61619 476 aaKnown RBP15.99■□□□□ 0.15
COL7A1-207ENST00000467985 MZT1Q08AG7 82 aa15.99■□□□□ 0.15
COL7A1-207ENST00000467985 EIF2B1Q14232 305 aaKnown RBP15.99■□□□□ 0.15
COL7A1-207ENST00000467985 GLYATL3Q5SZD4 288 aa15.99■□□□□ 0.15
COL7A1-207ENST00000467985 LINC01590Q5TEZ4 76 aa15.99■□□□□ 0.15
COL7A1-207ENST00000467985 SHFQ7M4L6 423 aa15.99■□□□□ 0.15
COL7A1-207ENST00000467985 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.99■□□□□ 0.15
COL7A1-207ENST00000467985 OR2AE1Q8NHA4 323 aa15.99■□□□□ 0.15
COL7A1-207ENST00000467985 NEIL1Q96FI4 390 aaPredicted RBP15.99■□□□□ 0.15
COL7A1-207ENST00000467985 TMEM246Q9BRR3 403 aa15.99■□□□□ 0.15
COL7A1-207ENST00000467985 ADAT1Q9BUB4 502 aaKnown RBP15.99■□□□□ 0.15
COL7A1-207ENST00000467985 MARCH7Q9H992 704 aa15.99■□□□□ 0.15
COL7A1-207ENST00000467985 FN3KRPQ9HA64 309 aa15.99■□□□□ 0.15
COL7A1-207ENST00000467985 FAM183AA6NL82 134 aa15.98■□□□□ 0.15
COL7A1-207ENST00000467985 G3V2T6 193 aa15.98■□□□□ 0.15
COL7A1-207ENST00000467985 GLCEO94923 617 aa15.98■□□□□ 0.15
COL7A1-207ENST00000467985 POU1F1P28069 291 aa15.98■□□□□ 0.15
COL7A1-207ENST00000467985 HSD11B1P28845 292 aa15.98■□□□□ 0.15
COL7A1-207ENST00000467985 DDOSTP39656 456 aa15.98■□□□□ 0.15
COL7A1-207ENST00000467985 PMELP40967 661 aa15.98■□□□□ 0.15
COL7A1-207ENST00000467985 GNB2P62879 340 aa15.98■□□□□ 0.15
COL7A1-207ENST00000467985 KCNJ8Q15842 424 aa15.98■□□□□ 0.15
COL7A1-207ENST00000467985 ARMCX4Q5H9R4 360 aa15.98■□□□□ 0.15
COL7A1-207ENST00000467985 DPY19L4Q7Z388 723 aa15.98■□□□□ 0.15
COL7A1-207ENST00000467985 ERI1Q8IV48 349 aaKnown RBP15.98■□□□□ 0.15
COL7A1-207ENST00000467985 IQCF1Q8N6M8 205 aa15.98■□□□□ 0.15
COL7A1-207ENST00000467985 OR8B3Q8NGG8 313 aa15.98■□□□□ 0.15
COL7A1-207ENST00000467985 FAM216AQ8WUB2 273 aa15.98■□□□□ 0.15
COL7A1-207ENST00000467985 RNF133Q8WVZ7 376 aa15.98■□□□□ 0.15
COL7A1-207ENST00000467985 SPSB4Q96A44 273 aa15.98■□□□□ 0.15
COL7A1-207ENST00000467985 OTULINQ96BN8 352 aa15.98■□□□□ 0.15
COL7A1-207ENST00000467985 NRBF2Q96F24 287 aa15.98■□□□□ 0.15
COL7A1-207ENST00000467985 OR8B2Q96RD0 313 aa15.98■□□□□ 0.15
COL7A1-207ENST00000467985 SLC6A7Q99884 636 aa15.98■□□□□ 0.15
COL7A1-207ENST00000467985 TEX12Q9BXU0 123 aa15.98■□□□□ 0.15
COL7A1-207ENST00000467985 NTN4Q9HB63 628 aa15.98■□□□□ 0.15
COL7A1-207ENST00000467985 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.97■□□□□ 0.15
COL7A1-207ENST00000467985 PRR23D1E9PI22 279 aaPredicted RBP15.97■□□□□ 0.15
COL7A1-207ENST00000467985 RGS9O75916 674 aaPredicted RBP15.97■□□□□ 0.15
COL7A1-207ENST00000467985 ZNF205O95201 554 aa15.97■□□□□ 0.15
COL7A1-207ENST00000467985 PTBP3O95758 552 aaKnown RBP15.97■□□□□ 0.15
COL7A1-207ENST00000467985 HMGN1P05114 100 aa15.97■□□□□ 0.15
COL7A1-207ENST00000467985 PRR23D2P0DMB1 279 aaPredicted RBP15.97■□□□□ 0.15
COL7A1-207ENST00000467985 PPIAL4GP0DN37 164 aa15.97■□□□□ 0.15
COL7A1-207ENST00000467985 ANXA8P13928 327 aa15.97■□□□□ 0.15
COL7A1-207ENST00000467985 CFL1P23528 166 aaKnown RBP15.97■□□□□ 0.15
COL7A1-207ENST00000467985 CX3CR1P49238 355 aa15.97■□□□□ 0.15
COL7A1-207ENST00000467985 GINS1Q14691 196 aa15.97■□□□□ 0.15
COL7A1-207ENST00000467985 BTNL3Q6UXE8 466 aa15.97■□□□□ 0.15
COL7A1-207ENST00000467985 LRRN1Q6UXK5 716 aa15.97■□□□□ 0.15
COL7A1-207ENST00000467985 DCDC5Q6ZRR9 648 aa15.97■□□□□ 0.15
COL7A1-207ENST00000467985 TMEM179BQ7Z7N9 219 aa15.97■□□□□ 0.15
COL7A1-207ENST00000467985 OR52H1Q8NGJ2 320 aa15.97■□□□□ 0.15
COL7A1-207ENST00000467985 OR6N2Q8NGY6 317 aa15.97■□□□□ 0.15
COL7A1-207ENST00000467985 DVL3Q92997 716 aaPredicted RBP15.97■□□□□ 0.15
COL7A1-207ENST00000467985 ABHD6Q9BV23 337 aa15.97■□□□□ 0.15
COL7A1-207ENST00000467985 MED20Q9H944 212 aa15.97■□□□□ 0.15
COL7A1-207ENST00000467985 TRIM36Q9NQ86 728 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms