RNA–Protein interactions for RNA: ENST00000467681.5

SSBP1-206, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-206ENST00000467681 APH1BQ8WW43 257 aa11.56□□□□□ -0.56
SSBP1-206ENST00000467681 NRG4Q8WWG1 115 aa11.56□□□□□ -0.56
SSBP1-206ENST00000467681 YIPF5Q969M3 257 aa11.56□□□□□ -0.56
SSBP1-206ENST00000467681 REEP6Q96HR9 211 aa11.56□□□□□ -0.56
SSBP1-206ENST00000467681 TBX5Q99593 518 aa11.56□□□□□ -0.56
SSBP1-206ENST00000467681 OPA3Q9H6K4 179 aa11.56□□□□□ -0.56
SSBP1-206ENST00000467681 CHODLQ9H9P2 273 aa11.56□□□□□ -0.56
SSBP1-206ENST00000467681 MRPS18AQ9NVS2 196 aaKnown RBP11.56□□□□□ -0.56
SSBP1-206ENST00000467681 FAM206AQ9NX38 181 aa11.56□□□□□ -0.56
SSBP1-206ENST00000467681 A0A096LNT2 108 aa11.55□□□□□ -0.56
SSBP1-206ENST00000467681 METTL15A6NJ78 407 aa11.55□□□□□ -0.56
SSBP1-206ENST00000467681 H0YJX3 145 aa11.55□□□□□ -0.56
SSBP1-206ENST00000467681 SMAD7O15105 426 aaKnown RBP11.55□□□□□ -0.56
SSBP1-206ENST00000467681 CDC14BO60729 498 aa11.55□□□□□ -0.56
SSBP1-206ENST00000467681 RP2O75695 350 aa11.55□□□□□ -0.56
SSBP1-206ENST00000467681 CLIC3O95833 236 aa11.55□□□□□ -0.56
SSBP1-206ENST00000467681 PNPP00491 289 aa11.55□□□□□ -0.56
SSBP1-206ENST00000467681 ACHEP22303 614 aa11.55□□□□□ -0.56
SSBP1-206ENST00000467681 CAPGP40121 348 aa11.55□□□□□ -0.56
SSBP1-206ENST00000467681 ISL1P61371 349 aa11.55□□□□□ -0.56
SSBP1-206ENST00000467681 FAM3AP98173 230 aa11.55□□□□□ -0.56
SSBP1-206ENST00000467681 IL5RAQ01344 420 aa11.55□□□□□ -0.56
SSBP1-206ENST00000467681 ZNF85Q03923 595 aa11.55□□□□□ -0.56
SSBP1-206ENST00000467681 LOXL1Q08397 574 aaPredicted RBP11.55□□□□□ -0.56
SSBP1-206ENST00000467681 IL18R1Q13478 541 aa11.55□□□□□ -0.56
SSBP1-206ENST00000467681 TIGD6Q17RP2 521 aa11.55□□□□□ -0.56
SSBP1-206ENST00000467681 SSX6Q7RTT6 188 aa11.55□□□□□ -0.56
SSBP1-206ENST00000467681 BHLHE23Q8NDY6 225 aa11.55□□□□□ -0.56
SSBP1-206ENST00000467681 TFAP2CQ92754 450 aa11.55□□□□□ -0.56
SSBP1-206ENST00000467681 ITFG2Q969R8 447 aa11.55□□□□□ -0.56
SSBP1-206ENST00000467681 LGALS12Q96DT0 336 aa11.55□□□□□ -0.56
SSBP1-206ENST00000467681 ELMOD3Q96FG2 381 aa11.55□□□□□ -0.56
SSBP1-206ENST00000467681 PIMREGQ9BSJ6 248 aa11.55□□□□□ -0.56
SSBP1-206ENST00000467681 ADI1Q9BV57 179 aa11.55□□□□□ -0.56
SSBP1-206ENST00000467681 TTTY10Q9BZA0 68 aa11.55□□□□□ -0.56
SSBP1-206ENST00000467681 SLC22A4Q9H015 551 aa11.55□□□□□ -0.56
SSBP1-206ENST00000467681 VCXQ9H320 206 aa11.55□□□□□ -0.56
SSBP1-206ENST00000467681 SAP30LQ9HAJ7 183 aa11.55□□□□□ -0.56
SSBP1-206ENST00000467681 AMBNQ9NP70 447 aa11.55□□□□□ -0.56
SSBP1-206ENST00000467681 RPL36Q9Y3U8 105 aaKnown RBP11.55□□□□□ -0.56
SSBP1-206ENST00000467681 HSPE1-MOB4S4R3N1 261 aa11.55□□□□□ -0.56
SSBP1-206ENST00000467681 IGHV1-69-2A0A0G2JMI3 117 aa11.54□□□□□ -0.56
SSBP1-206ENST00000467681 A0A0U1RQV5 110 aa11.54□□□□□ -0.56
SSBP1-206ENST00000467681 H0YL77 283 aa11.54□□□□□ -0.56
SSBP1-206ENST00000467681 SRSF10O75494 262 aaKnown RBP11.54□□□□□ -0.56
SSBP1-206ENST00000467681 KRT8P05787 483 aa11.54□□□□□ -0.56
SSBP1-206ENST00000467681 DBTP11182 482 aaKnown RBP11.54□□□□□ -0.56
SSBP1-206ENST00000467681 USF1P22415 310 aaPredicted RBP11.54□□□□□ -0.56
SSBP1-206ENST00000467681 GSK3AP49840 483 aa11.54□□□□□ -0.56
SSBP1-206ENST00000467681 ACTC1P68032 377 aa11.54□□□□□ -0.56
SSBP1-206ENST00000467681 ACTA1P68133 377 aa11.54□□□□□ -0.56
SSBP1-206ENST00000467681 ZNF91Q05481 1191 aa11.54□□□□□ -0.56
SSBP1-206ENST00000467681 ZNF829Q3KNS6 432 aaPredicted RBP11.54□□□□□ -0.56
SSBP1-206ENST00000467681 PLEKHG7Q6ZR37 379 aa11.54□□□□□ -0.56
SSBP1-206ENST00000467681 ZNF771Q7L3S4 317 aaPredicted RBP11.54□□□□□ -0.56
SSBP1-206ENST00000467681 KCTD20Q7Z5Y7 419 aa11.54□□□□□ -0.56
SSBP1-206ENST00000467681 ACBD7Q8N6N7 88 aa11.54□□□□□ -0.56
SSBP1-206ENST00000467681 YIPF7Q8N8F6 280 aa11.54□□□□□ -0.56
SSBP1-206ENST00000467681 SETD9Q8NE22 299 aa11.54□□□□□ -0.56
SSBP1-206ENST00000467681 OR8B12Q8NGG6 310 aa11.54□□□□□ -0.56
SSBP1-206ENST00000467681 OR56B2PQ8NGI1 322 aa11.54□□□□□ -0.56
SSBP1-206ENST00000467681 PPP1R14AQ96A00 147 aa11.54□□□□□ -0.56
SSBP1-206ENST00000467681 SIGLEC11Q96RL6 698 aa11.54□□□□□ -0.56
SSBP1-206ENST00000467681 PBOV1Q9GZY1 135 aa11.54□□□□□ -0.56
SSBP1-206ENST00000467681 ZNF275Q9NSD4 429 aaPredicted RBP11.54□□□□□ -0.56
SSBP1-206ENST00000467681 MRPL15Q9P015 296 aaKnown RBP11.54□□□□□ -0.56
SSBP1-206ENST00000467681 IL19Q9UHD0 177 aa11.54□□□□□ -0.56
SSBP1-206ENST00000467681 NUFIP1Q9UHK0 495 aaKnown RBP11.54□□□□□ -0.56
SSBP1-206ENST00000467681 ZNF391Q9UJN7 358 aa11.54□□□□□ -0.56
SSBP1-206ENST00000467681 R4GMQ9 66 aa11.54□□□□□ -0.56
SSBP1-206ENST00000467681 hCG_38984A0A1B0GV85 526 aa11.53□□□□□ -0.56
SSBP1-206ENST00000467681 DAPL1A0PJW8 107 aa11.53□□□□□ -0.56
SSBP1-206ENST00000467681 MLNRO43193 412 aa11.53□□□□□ -0.56
SSBP1-206ENST00000467681 FADS2O95864 444 aaKnown RBP11.53□□□□□ -0.56
SSBP1-206ENST00000467681 HLA-DPB1P04440 258 aa11.53□□□□□ -0.56
SSBP1-206ENST00000467681 TNFRSF1AP19438 455 aa11.53□□□□□ -0.56
SSBP1-206ENST00000467681 CA6P23280 308 aa11.53□□□□□ -0.56
SSBP1-206ENST00000467681 SRP9P49458 86 aaKnown RBP11.53□□□□□ -0.56
SSBP1-206ENST00000467681 RAB40BQ12829 278 aa11.53□□□□□ -0.56
SSBP1-206ENST00000467681 HFEQ30201 348 aa11.53□□□□□ -0.56
SSBP1-206ENST00000467681 KLHL22Q53GT1 634 aa11.53□□□□□ -0.56
SSBP1-206ENST00000467681 LIPNQ5VXI9 398 aa11.53□□□□□ -0.56
SSBP1-206ENST00000467681 BIVMQ86UB2 503 aa11.53□□□□□ -0.56
SSBP1-206ENST00000467681 KLBQ86Z14 1044 aa11.53□□□□□ -0.56
SSBP1-206ENST00000467681 EGFL6Q8IUX8 553 aa11.53□□□□□ -0.56
SSBP1-206ENST00000467681 ELMOD2Q8IZ81 293 aa11.53□□□□□ -0.56
SSBP1-206ENST00000467681 MAPK1IP1LQ8NDC0 245 aa11.53□□□□□ -0.56
SSBP1-206ENST00000467681 ITLN1Q8WWA0 313 aa11.53□□□□□ -0.56
SSBP1-206ENST00000467681 LYZL4Q96KX0 146 aa11.53□□□□□ -0.56
SSBP1-206ENST00000467681 BPESC1Q9GZL8 116 aa11.53□□□□□ -0.56
SSBP1-206ENST00000467681 G6PC2Q9NQR9 355 aa11.53□□□□□ -0.56
SSBP1-206ENST00000467681 NOP16Q9Y3C1 178 aaKnown RBP11.53□□□□□ -0.56
SSBP1-206ENST00000467681 SNX5Q9Y5X3 404 aa11.53□□□□□ -0.56
SSBP1-206ENST00000467681 CACNG2Q9Y698 323 aa11.53□□□□□ -0.56
SSBP1-206ENST00000467681 HIVEP2P31629 2446 aa11.52□□□□□ -0.56
SSBP1-206ENST00000467681 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.52□□□□□ -0.575e-19■■■■■ 32
SSBP1-206ENST00000467681 IGHV4-61A0A0C4DH41 118 aa11.52□□□□□ -0.57
SSBP1-206ENST00000467681 F5H5P2 479 aa11.52□□□□□ -0.57
SSBP1-206ENST00000467681 LOC110117498-PIK3R3F6TDL0 507 aa11.52□□□□□ -0.57
SSBP1-206ENST00000467681 PPIHO43447 177 aaKnown RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms