RNA–Protein interactions for RNA: ENST00000467563.3

CHRNA4-203, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,098 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-203ENST00000467563 SP140LQ9H930 580 aa16.35■□□□□ 0.21
CHRNA4-203ENST00000467563 ZNF71Q9NQZ8 489 aaPredicted RBP16.35■□□□□ 0.21
CHRNA4-203ENST00000467563 ATPIF1Q9UII2 106 aa16.35■□□□□ 0.21
CHRNA4-203ENST00000467563 MAP1BP46821 2468 aaKnown RBP16.35■□□□□ 0.21
CHRNA4-203ENST00000467563 NR4A2P43354 598 aa16.34■□□□□ 0.21
CHRNA4-203ENST00000467563 TMPRSS3P57727 454 aa16.34■□□□□ 0.21
CHRNA4-203ENST00000467563 FOXF2Q12947 444 aa16.34■□□□□ 0.21
CHRNA4-203ENST00000467563 TRIQKQ629K1 86 aa16.34■□□□□ 0.21
CHRNA4-203ENST00000467563 VWA1Q6PCB0 445 aa16.34■□□□□ 0.21
CHRNA4-203ENST00000467563 OR4D6Q8NGJ1 314 aa16.34■□□□□ 0.21
CHRNA4-203ENST00000467563 HAVCR1Q96D42 359 aa16.34■□□□□ 0.21
CHRNA4-203ENST00000467563 GTF3C1Q12789 2109 aa16.34■□□□□ 0.21
CHRNA4-203ENST00000467563 LOC100289279A0A1B0GTE1 492 aa16.34■□□□□ 0.21
CHRNA4-203ENST00000467563 SULT1B1O43704 296 aa16.34■□□□□ 0.21
CHRNA4-203ENST00000467563 LANCL1O43813 399 aa16.34■□□□□ 0.21
CHRNA4-203ENST00000467563 RAB1AP62820 205 aa16.34■□□□□ 0.21
CHRNA4-203ENST00000467563 SEM1Q6ZVN7 128 aa16.34■□□□□ 0.21
CHRNA4-203ENST00000467563 PGAP1Q75T13 922 aa16.34■□□□□ 0.21
CHRNA4-203ENST00000467563 RNF144BQ7Z419 303 aa16.34■□□□□ 0.21
CHRNA4-203ENST00000467563 RAB40AQ8WXH6 277 aa16.34■□□□□ 0.21
CHRNA4-203ENST00000467563 REEP6Q96HR9 211 aa16.34■□□□□ 0.21
CHRNA4-203ENST00000467563 ZFP3Q96NJ6 502 aa16.34■□□□□ 0.21
CHRNA4-203ENST00000467563 CNTD2Q9H8S5 307 aa16.34■□□□□ 0.21
CHRNA4-203ENST00000467563 PLA2G10O15496 165 aa16.33■□□□□ 0.21
CHRNA4-203ENST00000467563 FAHP16930 419 aa16.33■□□□□ 0.21
CHRNA4-203ENST00000467563 ASAH1Q13510 395 aa16.33■□□□□ 0.21
CHRNA4-203ENST00000467563 BIVMQ86UB2 503 aa16.33■□□□□ 0.21
CHRNA4-203ENST00000467563 Q8NA96 180 aa16.33■□□□□ 0.21
CHRNA4-203ENST00000467563 TRIM63Q969Q1 353 aa16.33■□□□□ 0.21
CHRNA4-203ENST00000467563 FOXRED1Q96CU9 486 aaPredicted RBP16.33■□□□□ 0.21
CHRNA4-203ENST00000467563 S100A16Q96FQ6 103 aaKnown RBP16.33■□□□□ 0.21
CHRNA4-203ENST00000467563 FAIMQ9NVQ4 179 aa16.33■□□□□ 0.21
CHRNA4-203ENST00000467563 IGKV1-9A0A0C4DH69 117 aa16.33■□□□□ 0.2
CHRNA4-203ENST00000467563 TMEM272A0A1B0GTI8 110 aa16.33■□□□□ 0.2
CHRNA4-203ENST00000467563 CCL2P13500 99 aa16.33■□□□□ 0.2
CHRNA4-203ENST00000467563 IGHV1-2P23083 117 aa16.33■□□□□ 0.2
CHRNA4-203ENST00000467563 CDK2P24941 298 aa16.33■□□□□ 0.2
CHRNA4-203ENST00000467563 ARR3P36575 388 aa16.33■□□□□ 0.2
CHRNA4-203ENST00000467563 RFX2P48378 723 aa16.33■□□□□ 0.2
CHRNA4-203ENST00000467563 PRSS12P56730 875 aa16.33■□□□□ 0.2
CHRNA4-203ENST00000467563 DMRTC1Q5HYR2 192 aa16.33■□□□□ 0.2
CHRNA4-203ENST00000467563 ZNF324BQ6AW86 544 aaPredicted RBP16.33■□□□□ 0.2
CHRNA4-203ENST00000467563 RTL6Q6ICC9 239 aa16.33■□□□□ 0.2
CHRNA4-203ENST00000467563 OR2A2Q6IF42 318 aa16.33■□□□□ 0.2
CHRNA4-203ENST00000467563 FAM180AQ6UWF9 173 aa16.33■□□□□ 0.2
CHRNA4-203ENST00000467563 BAIAP2L2Q6UXY1 529 aa16.33■□□□□ 0.2
CHRNA4-203ENST00000467563 ZNF584Q8IVC4 421 aa16.33■□□□□ 0.2
CHRNA4-203ENST00000467563 SORCS2Q96PQ0 1159 aa16.33■□□□□ 0.2
CHRNA4-203ENST00000467563 SPACA5Q96QH8 159 aa16.33■□□□□ 0.2
CHRNA4-203ENST00000467563 THAP7Q9BT49 309 aaPredicted RBP16.33■□□□□ 0.2
CHRNA4-203ENST00000467563 METTL17Q9H7H0 456 aaPredicted RBP16.33■□□□□ 0.2
CHRNA4-203ENST00000467563 PIGLQ9Y2B2 252 aa16.33■□□□□ 0.2
CHRNA4-203ENST00000467563 EEF1E1O43324 174 aaKnown RBP16.32■□□□□ 0.2
CHRNA4-203ENST00000467563 MTRF1O75570 445 aaKnown RBP16.32■□□□□ 0.2
CHRNA4-203ENST00000467563 EDN3P14138 238 aa16.32■□□□□ 0.2
CHRNA4-203ENST00000467563 ARSBP15848 533 aa16.32■□□□□ 0.2
CHRNA4-203ENST00000467563 ACKR3P25106 362 aa16.32■□□□□ 0.2
CHRNA4-203ENST00000467563 TBRG1Q3YBR2 411 aa16.32■□□□□ 0.2
CHRNA4-203ENST00000467563 NRARPQ7Z6K4 114 aa16.32■□□□□ 0.2
CHRNA4-203ENST00000467563 C19orf18Q8NEA5 215 aa16.32■□□□□ 0.2
CHRNA4-203ENST00000467563 OR6K3Q8NGY3 331 aa16.32■□□□□ 0.2
CHRNA4-203ENST00000467563 C1QTNF5Q9BXJ0 243 aa16.32■□□□□ 0.2
CHRNA4-203ENST00000467563 C11orf54Q9H0W9 315 aaPredicted RBP16.32■□□□□ 0.2
CHRNA4-203ENST00000467563 MBD3L4A6NDZ8 208 aaPredicted RBP16.31■□□□□ 0.2
CHRNA4-203ENST00000467563 MBD3L3A6NE82 208 aaPredicted RBP16.31■□□□□ 0.2
CHRNA4-203ENST00000467563 MBD3L5A6NJ08 208 aaPredicted RBP16.31■□□□□ 0.2
CHRNA4-203ENST00000467563 TPOP07202 933 aa16.31■□□□□ 0.2
CHRNA4-203ENST00000467563 COX5BP10606 129 aa16.31■□□□□ 0.2
CHRNA4-203ENST00000467563 STOMP27105 288 aa16.31■□□□□ 0.2
CHRNA4-203ENST00000467563 THBS4P35443 961 aa16.31■□□□□ 0.2
CHRNA4-203ENST00000467563 PTH2RP49190 550 aa16.31■□□□□ 0.2
CHRNA4-203ENST00000467563 MMP15P51511 669 aa16.31■□□□□ 0.2
CHRNA4-203ENST00000467563 DGCR2P98153 550 aa16.31■□□□□ 0.2
CHRNA4-203ENST00000467563 PITPNAQ00169 270 aa16.31■□□□□ 0.2
CHRNA4-203ENST00000467563 TNK1Q13470 666 aa16.31■□□□□ 0.2
CHRNA4-203ENST00000467563 KRTCAP3Q53RY4 240 aa16.31■□□□□ 0.2
CHRNA4-203ENST00000467563 COLCA1Q6ZS62 124 aa16.31■□□□□ 0.2
CHRNA4-203ENST00000467563 Q6ZT83 130 aa16.31■□□□□ 0.2
CHRNA4-203ENST00000467563 MBD3L2Q8NHZ7 208 aaPredicted RBP16.31■□□□□ 0.2
CHRNA4-203ENST00000467563 RFT1Q96AA3 541 aa16.31■□□□□ 0.2
CHRNA4-203ENST00000467563 FAM215AQ9Y5M1 114 aa16.31■□□□□ 0.2
CHRNA4-203ENST00000467563 C5orf49A4QMS7 147 aa16.31■□□□□ 0.2
CHRNA4-203ENST00000467563 LDLRAD4O15165 306 aa16.31■□□□□ 0.2
CHRNA4-203ENST00000467563 CTAG2O75638 210 aa16.31■□□□□ 0.2
CHRNA4-203ENST00000467563 TNFSF13O75888 250 aa16.31■□□□□ 0.2
CHRNA4-203ENST00000467563 TOXO94900 526 aa16.31■□□□□ 0.2
CHRNA4-203ENST00000467563 ERCC1P07992 297 aaPredicted RBP16.31■□□□□ 0.2
CHRNA4-203ENST00000467563 FAM87AP0C7U9 286 aa16.31■□□□□ 0.2
CHRNA4-203ENST00000467563 CCNOP22674 350 aa16.31■□□□□ 0.2
CHRNA4-203ENST00000467563 ZNF93P35789 620 aaPredicted RBP16.31■□□□□ 0.2
CHRNA4-203ENST00000467563 UCNP55089 124 aa16.31■□□□□ 0.2
CHRNA4-203ENST00000467563 CXADRP78310 365 aa16.31■□□□□ 0.2
CHRNA4-203ENST00000467563 UBE2V2Q15819 145 aa16.31■□□□□ 0.2
CHRNA4-203ENST00000467563 RNASE12Q5GAN4 147 aaKnown RBP16.31■□□□□ 0.2
CHRNA4-203ENST00000467563 TMEM69Q5SWH9 247 aa16.31■□□□□ 0.2
CHRNA4-203ENST00000467563 TMEM53Q6P2H8 277 aa16.31■□□□□ 0.2
CHRNA4-203ENST00000467563 CCDC54Q8NEL0 328 aa16.31■□□□□ 0.2
CHRNA4-203ENST00000467563 GCDHQ92947 438 aaPredicted RBP16.31■□□□□ 0.2
CHRNA4-203ENST00000467563 UQCC2Q9BRT2 126 aa16.31■□□□□ 0.2
CHRNA4-203ENST00000467563 CHST5Q9GZS9 411 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 160.1 ms