RNA–Protein interactions for RNA: ENST00000467539.1

CGREF1-208, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 4

Gene CGREF1, Length 548 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-208ENST00000467539 PAPOLBQ9NRJ5 636 aaKnown RBP15.24■□□□□ 0.03
CGREF1-208ENST00000467539 MRPL15Q9P015 296 aaKnown RBP15.24■□□□□ 0.03
CGREF1-208ENST00000467539 N6AMT1Q9Y5N5 214 aa15.24■□□□□ 0.03
CGREF1-208ENST00000467539 IGHV3-64DA0A0J9YX35 117 aa15.23■□□□□ 0.03
CGREF1-208ENST00000467539 TCF21O43680 179 aa15.23■□□□□ 0.03
CGREF1-208ENST00000467539 PTBP3O95758 552 aaKnown RBP15.23■□□□□ 0.03
CGREF1-208ENST00000467539 CYB5R3P00387 301 aaPredicted RBP15.23■□□□□ 0.03
CGREF1-208ENST00000467539 HSD11B1P28845 292 aa15.23■□□□□ 0.03
CGREF1-208ENST00000467539 RAD23AP54725 363 aa15.23■□□□□ 0.03
CGREF1-208ENST00000467539 ESRRGP62508 458 aa15.23■□□□□ 0.03
CGREF1-208ENST00000467539 SCGB2A2Q13296 93 aa15.23■□□□□ 0.03
CGREF1-208ENST00000467539 ATP6AP1Q15904 470 aa15.23■□□□□ 0.03
CGREF1-208ENST00000467539 SNAPC1Q16533 368 aa15.23■□□□□ 0.03
CGREF1-208ENST00000467539 KRTAP24-1Q3LI83 254 aa15.23■□□□□ 0.03
CGREF1-208ENST00000467539 KLHL12Q53G59 568 aa15.23■□□□□ 0.03
CGREF1-208ENST00000467539 ZNF771Q7L3S4 317 aaPredicted RBP15.23■□□□□ 0.03
CGREF1-208ENST00000467539 OR52H1Q8NGJ2 320 aa15.23■□□□□ 0.03
CGREF1-208ENST00000467539 THEM6Q8WUY1 208 aa15.23■□□□□ 0.03
CGREF1-208ENST00000467539 AMELYQ99218 206 aa15.23■□□□□ 0.03
CGREF1-208ENST00000467539 TEAD3Q99594 435 aa15.23■□□□□ 0.03
CGREF1-208ENST00000467539 C7orf69Q9H7B7 122 aa15.23■□□□□ 0.03
CGREF1-208ENST00000467539 TVP23BQ9NYZ1 205 aa15.23■□□□□ 0.03
CGREF1-208ENST00000467539 AP4S1Q9Y587 144 aa15.23■□□□□ 0.03
CGREF1-208ENST00000467539 STAB1Q9NY15 2570 aa15.22■□□□□ 0.03
CGREF1-208ENST00000467539 A0A0A6YYJ9 748 aa15.22■□□□□ 0.03
CGREF1-208ENST00000467539 G3V2T6 193 aa15.22■□□□□ 0.03
CGREF1-208ENST00000467539 TRAPPC2LH3BP13 241 aa15.22■□□□□ 0.03
CGREF1-208ENST00000467539 LYNP07948 512 aa15.22■□□□□ 0.03
CGREF1-208ENST00000467539 H2BFMP0C1H6 154 aa15.22■□□□□ 0.03
CGREF1-208ENST00000467539 SLC2A5P22732 501 aa15.22■□□□□ 0.03
CGREF1-208ENST00000467539 FASP25445 335 aa15.22■□□□□ 0.03
CGREF1-208ENST00000467539 CX3CR1P49238 355 aa15.22■□□□□ 0.03
CGREF1-208ENST00000467539 FAM3AP98173 230 aa15.22■□□□□ 0.03
CGREF1-208ENST00000467539 PTGES3Q15185 160 aaKnown RBP15.22■□□□□ 0.03
CGREF1-208ENST00000467539 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.22■□□□□ 0.03
CGREF1-208ENST00000467539 MIOXQ9UGB7 285 aa15.22■□□□□ 0.03
CGREF1-208ENST00000467539 OPN4Q9UHM6 478 aa15.22■□□□□ 0.03
CGREF1-208ENST00000467539 PPIAL4AQ9Y536 164 aa15.22■□□□□ 0.03
CGREF1-208ENST00000467539 WNK2Q9Y3S1 2297 aa15.22■□□□□ 0.03
CGREF1-208ENST00000467539 ARHGAP32A7KAX9 2087 aa15.21■□□□□ 0.03
CGREF1-208ENST00000467539 LOC105371242A0A075B767 164 aa15.21■□□□□ 0.03
CGREF1-208ENST00000467539 CEACAM18A8MTB9 384 aa15.21■□□□□ 0.03
CGREF1-208ENST00000467539 A8MXK9 166 aa15.21■□□□□ 0.03
CGREF1-208ENST00000467539 TBX1O43435 398 aa15.21■□□□□ 0.03
CGREF1-208ENST00000467539 SELENOFO60613 162 aa15.21■□□□□ 0.03
CGREF1-208ENST00000467539 ZNF205O95201 554 aa15.21■□□□□ 0.03
CGREF1-208ENST00000467539 ANXA2P07355 339 aaKnown RBP15.21■□□□□ 0.03
CGREF1-208ENST00000467539 IRF2P14316 349 aa15.21■□□□□ 0.03
CGREF1-208ENST00000467539 CFL1P23528 166 aaKnown RBP15.21■□□□□ 0.03
CGREF1-208ENST00000467539 ZNF121P58317 390 aaPredicted RBP15.21■□□□□ 0.03
CGREF1-208ENST00000467539 MPPED2Q15777 294 aa15.21■□□□□ 0.03
CGREF1-208ENST00000467539 C1orf146Q5VVC0 180 aa15.21■□□□□ 0.03
CGREF1-208ENST00000467539 SLC16A9Q7RTY1 509 aa15.21■□□□□ 0.03
CGREF1-208ENST00000467539 C1QL2Q7Z5L3 287 aa15.21■□□□□ 0.03
CGREF1-208ENST00000467539 BBS1Q8NFJ9 593 aa15.21■□□□□ 0.03
CGREF1-208ENST00000467539 OR11L1Q8NGX0 322 aa15.21■□□□□ 0.03
CGREF1-208ENST00000467539 NANPQ8TBE9 248 aa15.21■□□□□ 0.03
CGREF1-208ENST00000467539 TMEM246Q9BRR3 403 aa15.21■□□□□ 0.03
CGREF1-208ENST00000467539 OCEL1Q9H607 264 aa15.21■□□□□ 0.03
CGREF1-208ENST00000467539 MMP26Q9NRE1 261 aa15.21■□□□□ 0.03
CGREF1-208ENST00000467539 KIF17Q9P2E2 1029 aa15.21■□□□□ 0.03
CGREF1-208ENST00000467539 ZNF319Q9P2F9 582 aa15.21■□□□□ 0.03
CGREF1-208ENST00000467539 FAM20BO75063 409 aa15.2■□□□□ 0.02
CGREF1-208ENST00000467539 ALOX5APP20292 161 aa15.2■□□□□ 0.02
CGREF1-208ENST00000467539 SEC61A1P61619 476 aaKnown RBP15.2■□□□□ 0.02
CGREF1-208ENST00000467539 EFNB1P98172 346 aa15.2■□□□□ 0.02
CGREF1-208ENST00000467539 SRSF2Q01130 221 aaKnown RBP15.2■□□□□ 0.02
CGREF1-208ENST00000467539 MZT1Q08AG7 82 aa15.2■□□□□ 0.02
CGREF1-208ENST00000467539 APOFQ13790 326 aa15.2■□□□□ 0.02
CGREF1-208ENST00000467539 TIGD6Q17RP2 521 aa15.2■□□□□ 0.02
CGREF1-208ENST00000467539 ZNF404Q494X3 552 aa15.2■□□□□ 0.02
CGREF1-208ENST00000467539 ESCO2Q56NI9 601 aa15.2■□□□□ 0.02
CGREF1-208ENST00000467539 FAM201AQ5SY85 155 aa15.2■□□□□ 0.02
CGREF1-208ENST00000467539 PRAMEF6Q5VXH4 476 aa15.2■□□□□ 0.02
CGREF1-208ENST00000467539 KDM4DQ6B0I6 523 aa15.2■□□□□ 0.02
CGREF1-208ENST00000467539 FAM57BQ71RH2 274 aa15.2■□□□□ 0.02
CGREF1-208ENST00000467539 ZDHHC13Q8IUH4 622 aa15.2■□□□□ 0.02
CGREF1-208ENST00000467539 OR56B2PQ8NGI1 322 aa15.2■□□□□ 0.02
CGREF1-208ENST00000467539 REEP6Q96HR9 211 aa15.2■□□□□ 0.02
CGREF1-208ENST00000467539 ADAT1Q9BUB4 502 aaKnown RBP15.2■□□□□ 0.02
CGREF1-208ENST00000467539 YIPF3Q9GZM5 350 aa15.2■□□□□ 0.02
CGREF1-208ENST00000467539 OR10A2Q9H208 303 aa15.2■□□□□ 0.02
CGREF1-208ENST00000467539 NIPAL2Q9H841 368 aa15.2■□□□□ 0.02
CGREF1-208ENST00000467539 FN3KRPQ9HA64 309 aa15.2■□□□□ 0.02
CGREF1-208ENST00000467539 UFSP2Q9NUQ7 469 aa15.2■□□□□ 0.02
CGREF1-208ENST00000467539 RNF7Q9UBF6 113 aa15.2■□□□□ 0.02
CGREF1-208ENST00000467539 LRCH1Q9Y2L9 728 aa15.2■□□□□ 0.02
CGREF1-208ENST00000467539 ZNF12P17014 697 aa15.19■□□□□ 0.02
CGREF1-208ENST00000467539 RPS7P62081 194 aaKnown RBP15.19■□□□□ 0.02
CGREF1-208ENST00000467539 DEGS2Q6QHC5 323 aa15.19■□□□□ 0.02
CGREF1-208ENST00000467539 PGAM5Q96HS1 289 aa15.19■□□□□ 0.02
CGREF1-208ENST00000467539 RGCCQ9H4X1 137 aa15.19■□□□□ 0.02
CGREF1-208ENST00000467539 KRT84Q9NSB2 600 aa15.19■□□□□ 0.02
CGREF1-208ENST00000467539 C14orf119Q9NWQ9 140 aa15.19■□□□□ 0.02
CGREF1-208ENST00000467539 DNAJC27Q9NZQ0 273 aa15.19■□□□□ 0.02
CGREF1-208ENST00000467539 INSIG2Q9Y5U4 225 aa15.19■□□□□ 0.02
CGREF1-208ENST00000467539 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.18■□□□□ 0.02
CGREF1-208ENST00000467539 ANKRD30BLA7E2S9 258 aa15.18■□□□□ 0.02
CGREF1-208ENST00000467539 FSHBP01225 129 aa15.18■□□□□ 0.02
CGREF1-208ENST00000467539 FCGR1AP12314 374 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms