RNA–Protein interactions for RNA: ENST00000466982.1

SFXN3-204, Transcript of sideroflexin 3, humanhuman

TSL 2

Gene SFXN3, Length 2,756 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-204ENST00000466982 HIST1H2BNQ99877 126 aa9.91□□□□□ -0.82
SFXN3-204ENST00000466982 HIST1H2BMQ99879 126 aa9.91□□□□□ -0.82
SFXN3-204ENST00000466982 FAAP24Q9BTP7 215 aa9.91□□□□□ -0.82
SFXN3-204ENST00000466982 ALG12Q9BV10 488 aa9.91□□□□□ -0.82
SFXN3-204ENST00000466982 SYT4Q9H2B2 425 aa9.91□□□□□ -0.82
SFXN3-204ENST00000466982 DPEP2Q9H4A9 486 aa9.91□□□□□ -0.82
SFXN3-204ENST00000466982 IL21Q9HBE4 155 aa9.91□□□□□ -0.82
SFXN3-204ENST00000466982 CHST11Q9NPF2 352 aa9.91□□□□□ -0.82
SFXN3-204ENST00000466982 YBX2Q9Y2T7 364 aaKnown RBP9.91□□□□□ -0.82
SFXN3-204ENST00000466982 LRRK1Q38SD2 2015 aa9.9□□□□□ -0.82
SFXN3-204ENST00000466982 ELOA3DA6NLF2 546 aaPredicted RBP9.9□□□□□ -0.82
SFXN3-204ENST00000466982 OR4C45A6NMZ5 311 aa9.9□□□□□ -0.82
SFXN3-204ENST00000466982 CDC40O60508 579 aaKnown RBP eCLIP9.9□□□□□ -0.82
SFXN3-204ENST00000466982 ADAP1O75689 374 aa9.9□□□□□ -0.82
SFXN3-204ENST00000466982 AHSA1O95433 338 aa9.9□□□□□ -0.82
SFXN3-204ENST00000466982 CNOT4O95628 575 aaKnown RBP9.9□□□□□ -0.82
SFXN3-204ENST00000466982 GABRR1P24046 479 aa9.9□□□□□ -0.82
SFXN3-204ENST00000466982 CCKBRP32239 447 aa9.9□□□□□ -0.82
SFXN3-204ENST00000466982 SULT1A1P50225 295 aa9.9□□□□□ -0.82
SFXN3-204ENST00000466982 NOVA1P51513 510 aaKnown RBP9.9□□□□□ -0.82
SFXN3-204ENST00000466982 PTTG1IPP53801 180 aa9.9□□□□□ -0.82
SFXN3-204ENST00000466982 SELENOTP62341 195 aa9.9□□□□□ -0.82
SFXN3-204ENST00000466982 RAB35Q15286 201 aa9.9□□□□□ -0.82
SFXN3-204ENST00000466982 ELOA3BQ3SY89 546 aa9.9□□□□□ -0.82
SFXN3-204ENST00000466982 Q5PR19 223 aa9.9□□□□□ -0.82
SFXN3-204ENST00000466982 PARS2Q7L3T8 475 aaKnown RBP9.9□□□□□ -0.82
SFXN3-204ENST00000466982 TAF8Q7Z7C8 310 aa9.9□□□□□ -0.82
SFXN3-204ENST00000466982 ELOA3Q8NG57 546 aa9.9□□□□□ -0.82
SFXN3-204ENST00000466982 OR51F2Q8NH61 342 aa9.9□□□□□ -0.82
SFXN3-204ENST00000466982 RCC1LQ96I51 464 aaKnown RBP9.9□□□□□ -0.82
SFXN3-204ENST00000466982 YPEL4Q96NS1 127 aa9.9□□□□□ -0.82
SFXN3-204ENST00000466982 RXFP3Q9NSD7 469 aa9.9□□□□□ -0.82
SFXN3-204ENST00000466982 ZFP30Q9Y2G7 519 aa9.9□□□□□ -0.82
SFXN3-204ENST00000466982 AMDHD2Q9Y303 409 aa9.9□□□□□ -0.82
SFXN3-204ENST00000466982 TET1Q8NFU7 2136 aa9.9□□□□□ -0.82
SFXN3-204ENST00000466982 TRBV5-7A0A0A0MS05 114 aa9.9□□□□□ -0.83
SFXN3-204ENST00000466982 LOC100289279A0A1B0GTE1 492 aa9.9□□□□□ -0.83
SFXN3-204ENST00000466982 LATO43561 262 aa9.9□□□□□ -0.83
SFXN3-204ENST00000466982 NDUFB2O95178 105 aa9.9□□□□□ -0.83
SFXN3-204ENST00000466982 CDKN2AP42771 156 aaKnown RBP9.9□□□□□ -0.83
SFXN3-204ENST00000466982 LSSP48449 732 aa9.9□□□□□ -0.83
SFXN3-204ENST00000466982 ADAM8P78325 824 aa9.9□□□□□ -0.83
SFXN3-204ENST00000466982 NTHL1P78549 312 aa9.9□□□□□ -0.83
SFXN3-204ENST00000466982 HERPUD1Q15011 391 aa9.9□□□□□ -0.83
SFXN3-204ENST00000466982 EBPQ15125 230 aaKnown RBP9.9□□□□□ -0.83
SFXN3-204ENST00000466982 KRTCAP3Q53RY4 240 aa9.9□□□□□ -0.83
SFXN3-204ENST00000466982 DCST2Q5T1A1 773 aa9.9□□□□□ -0.83
SFXN3-204ENST00000466982 BTNL8Q6UX41 500 aa9.9□□□□□ -0.83
SFXN3-204ENST00000466982 THRSPQ92748 146 aa9.9□□□□□ -0.83
SFXN3-204ENST00000466982 NKD1Q969G9 470 aa9.9□□□□□ -0.83
SFXN3-204ENST00000466982 SRA1Q9HD15 236 aaKnown RBP9.9□□□□□ -0.83
SFXN3-204ENST00000466982 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.9□□□□□ -0.83
SFXN3-204ENST00000466982 CGGBP1Q9UFW8 167 aaPredicted RBP9.9□□□□□ -0.83
SFXN3-204ENST00000466982 SUSD2Q9UGT4 822 aa9.9□□□□□ -0.83
SFXN3-204ENST00000466982 APOBEC3BQ9UH17 382 aaKnown RBP9.9□□□□□ -0.83
SFXN3-204ENST00000466982 CCL26Q9Y258 94 aa9.9□□□□□ -0.83
SFXN3-204ENST00000466982 A0A0B4J2E0 115 aa9.89□□□□□ -0.83
SFXN3-204ENST00000466982 A0A1B0GX12 115 aa9.89□□□□□ -0.83
SFXN3-204ENST00000466982 A0A1W2PQ45 241 aaPredicted RBP9.89□□□□□ -0.83
SFXN3-204ENST00000466982 A0A1W2PQY0 241 aa9.89□□□□□ -0.83
SFXN3-204ENST00000466982 C1QTNF3-AMACRE9PGA6 284 aa9.89□□□□□ -0.83
SFXN3-204ENST00000466982 DOK2O60496 412 aa9.89□□□□□ -0.83
SFXN3-204ENST00000466982 VAMP5O95183 116 aa9.89□□□□□ -0.83
SFXN3-204ENST00000466982 GOSR1O95249 250 aa9.89□□□□□ -0.83
SFXN3-204ENST00000466982 PCCBP05166 539 aa9.89□□□□□ -0.83
SFXN3-204ENST00000466982 APOBEC3AP31941 199 aaPredicted RBP9.89□□□□□ -0.83
SFXN3-204ENST00000466982 BRS3P32247 399 aa9.89□□□□□ -0.83
SFXN3-204ENST00000466982 KLF3P57682 345 aaPredicted RBP9.89□□□□□ -0.83
SFXN3-204ENST00000466982 VAMP2P63027 116 aa9.89□□□□□ -0.83
SFXN3-204ENST00000466982 BTN3A2P78410 334 aa9.89□□□□□ -0.83
SFXN3-204ENST00000466982 OR5I1Q13606 314 aa9.89□□□□□ -0.83
SFXN3-204ENST00000466982 GAS6Q14393 721 aa9.89□□□□□ -0.83
SFXN3-204ENST00000466982 RAB11BQ15907 218 aa9.89□□□□□ -0.83
SFXN3-204ENST00000466982 ATP6V1FQ16864 119 aa9.89□□□□□ -0.83
SFXN3-204ENST00000466982 ALG10BQ5I7T1 473 aa9.89□□□□□ -0.83
SFXN3-204ENST00000466982 LEG1Q6P5S2 330 aa9.89□□□□□ -0.83
SFXN3-204ENST00000466982 LRRC69Q6ZNQ3 347 aa9.89□□□□□ -0.83
SFXN3-204ENST00000466982 ADIPOR2Q86V24 386 aa9.89□□□□□ -0.83
SFXN3-204ENST00000466982 GKN2Q86XP6 184 aa9.89□□□□□ -0.83
SFXN3-204ENST00000466982 OR2A1Q8NGT9 310 aa9.89□□□□□ -0.83
SFXN3-204ENST00000466982 ZNF417Q8TAU3 575 aa9.89□□□□□ -0.83
SFXN3-204ENST00000466982 RNASEH2CQ8TDP1 164 aaKnown RBP9.89□□□□□ -0.83
SFXN3-204ENST00000466982 FAM216AQ8WUB2 273 aa9.89□□□□□ -0.83
SFXN3-204ENST00000466982 HIST1H2BLQ99880 126 aa9.89□□□□□ -0.83
SFXN3-204ENST00000466982 METTL8Q9H825 291 aaKnown RBP9.89□□□□□ -0.83
SFXN3-204ENST00000466982 TMEM74BQ9NUR3 256 aa9.89□□□□□ -0.83
SFXN3-204ENST00000466982 SERGEFQ9UGK8 458 aa9.89□□□□□ -0.83
SFXN3-204ENST00000466982 NUP210LQ5VU65 1888 aa9.89□□□□□ -0.83
SFXN3-204ENST00000466982 TRBV11-1A0A0K0K1C0 115 aa9.89□□□□□ -0.83
SFXN3-204ENST00000466982 H7C1C5 153 aa9.89□□□□□ -0.83
SFXN3-204ENST00000466982 ABHD16AO95870 558 aa9.89□□□□□ -0.83
SFXN3-204ENST00000466982 IL2RAP01589 272 aa9.89□□□□□ -0.83
SFXN3-204ENST00000466982 DBIP07108 87 aaKnown RBP9.89□□□□□ -0.83
SFXN3-204ENST00000466982 CTXN2P0C2S0 81 aa9.89□□□□□ -0.83
SFXN3-204ENST00000466982 ERGP11308 486 aa9.89□□□□□ -0.83
SFXN3-204ENST00000466982 RAB6AP20340 208 aa9.89□□□□□ -0.83
SFXN3-204ENST00000466982 MAOAP21397 527 aa9.89□□□□□ -0.83
SFXN3-204ENST00000466982 DVL1P1P54792 670 aaPredicted RBP9.89□□□□□ -0.83
SFXN3-204ENST00000466982 FGF8P55075 233 aaPredicted RBP9.89□□□□□ -0.83
SFXN3-204ENST00000466982 LCN6P62502 163 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms