RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 KCTD9Q7L273 389 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 GRINAQ7Z429 371 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 RANBP3LQ86VV4 465 aaPredicted RBP2.76□□□□□ -1.97
VPS13D-203ENST00000466732 C10orf107Q8IVU9 208 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 ZNF100Q8IYN0 542 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 PRR22Q8IZ63 422 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 STPG2Q8N412 459 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 ZNF525Q8N782 197 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 NECAB1Q8N987 351 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 CCDC71LQ8N9Z2 235 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 COLGALT1Q8NBJ5 622 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 FBXL13Q8NEE6 735 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 OR10W1Q8NGF6 305 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 OR56B1Q8NGI3 324 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 OR4D6Q8NGJ1 314 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 OR13C9Q8NGT0 318 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 OR13D1Q8NGV5 346 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 OR11L1Q8NGX0 322 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 DYNC2LI1Q8TCX1 351 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 GPX8Q8TED1 209 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 ZFP90Q8TF47 636 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 ACOT11Q8WXI4 607 aaPredicted RBP2.76□□□□□ -1.97
VPS13D-203ENST00000466732 TMEM234Q8WY98 164 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 ARNTL2Q8WYA1 636 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 TM4SF18Q96CE8 201 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 FAF2Q96CS3 445 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 CCDC124Q96CT7 223 aaKnown RBP2.76□□□□□ -1.97
VPS13D-203ENST00000466732 PHYHIPLQ96FC7 376 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 CMTM7Q96FZ5 175 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 C4orf36Q96KX1 117 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 GLT1D1Q96MS3 346 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 Q96MT0 163 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 GUCD1Q96NT3 240 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 ZNF607Q96SK3 696 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 STACQ99469 402 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 FMO2Q99518 471 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 PHB2Q99623 299 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 RBBP8Q99708 897 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 OMDQ99983 421 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 KCTD14Q9BQ13 255 aaPredicted RBP2.76□□□□□ -1.97
VPS13D-203ENST00000466732 VPS25Q9BRG1 176 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 SLC30A2Q9BRI3 323 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 SLC35A5Q9BS91 424 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 TMEM121Q9BTD3 319 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 MED10Q9BTT4 135 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 ZNF426Q9BUY5 554 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 ANKRD60Q9BZ19 345 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 NKX6-2Q9C056 277 aaPredicted RBP2.76□□□□□ -1.97
VPS13D-203ENST00000466732 SLC38A1Q9H2H9 487 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 TMEM38AQ9H6F2 299 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 TPT1P8Q9HAU6 139 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 CACYBPQ9HB71 228 aaKnown RBP2.76□□□□□ -1.97
VPS13D-203ENST00000466732 YAE1D1Q9NRH1 226 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 PAK1IP1Q9NWT1 392 aaPredicted RBP2.76□□□□□ -1.97
VPS13D-203ENST00000466732 TAS2R16Q9NYV7 291 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 TECRQ9NZ01 308 aaKnown RBP2.76□□□□□ -1.97
VPS13D-203ENST00000466732 AHSPQ9NZD4 102 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 FBXO5Q9UKT4 447 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 FBXL3Q9UKT7 428 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 TBC1D24Q9ULP9 559 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 PLA2G4CQ9UP65 541 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 RNF11Q9Y3C5 154 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 OR51B4Q9Y5P0 310 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 ECM29Q5VYK3 1845 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 ATP10BO94823 1461 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 KIF1AQ12756 1690 aa2.76□□□□□ -1.97
VPS13D-203ENST00000466732 ZSWIM8A7E2V4 1837 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 KIF13BQ9NQT8 1826 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 FBLL1A6NHQ2 334 aaKnown RBP2.75□□□□□ -1.97
VPS13D-203ENST00000466732 FAM74A7A6NL05 159 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 C1orf196B1AJZ1 125 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 M0R143 59 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 AIPO00170 330 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 CDIPTO14735 213 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 UBDO15205 165 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 ZNF264O43296 627 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 TCF21O43680 179 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 SNAPC5O75971 98 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 VAPBO95292 243 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 CTDNEP1O95476 244 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 CLDN9O95484 217 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 C6orf47O95873 294 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 SERPINA1P01009 418 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 FTH1P02794 183 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 C8GP07360 202 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 TSPAN19P0C672 248 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 UBCP0CG48 685 aaKnown RBP2.75□□□□□ -1.97
VPS13D-203ENST00000466732 MYL2P10916 166 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 GTF2F2P13984 249 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 RPA2P15927 270 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 HLA-GP17693 338 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 PGAM1P18669 254 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 FUT1P19526 365 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 SERPINA2P20848 420 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 GSTM3P21266 225 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 TBXA2RP21731 343 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 ZBTB25P24278 435 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 DPP4P27487 766 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 GNRHRP30968 328 aa2.75□□□□□ -1.97
VPS13D-203ENST00000466732 CALCRP30988 508 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms