RNA–Protein interactions for RNA: ENST00000466704.1

CALD1-214, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 903 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-214ENST00000466704 TWIST2Q8WVJ9 160 aa2.72□□□□□ -1.97
CALD1-214ENST00000466704 UCN3Q969E3 161 aa2.72□□□□□ -1.97
CALD1-214ENST00000466704 PPWD1Q96BP3 646 aaKnown RBP2.72□□□□□ -1.97
CALD1-214ENST00000466704 TM4SF18Q96CE8 201 aa2.72□□□□□ -1.97
CALD1-214ENST00000466704 SLC25A38Q96DW6 304 aa2.72□□□□□ -1.97
CALD1-214ENST00000466704 C16orf74Q96GX8 76 aa2.72□□□□□ -1.97
CALD1-214ENST00000466704 IMMP1LQ96LU5 166 aa2.72□□□□□ -1.97
CALD1-214ENST00000466704 CCT7Q99832 543 aa2.72□□□□□ -1.97
CALD1-214ENST00000466704 FAIM2Q9BWQ8 316 aa2.72□□□□□ -1.97
CALD1-214ENST00000466704 C20orf27Q9GZN8 174 aa2.72□□□□□ -1.97
CALD1-214ENST00000466704 ILKAPQ9H0C8 392 aaPredicted RBP2.72□□□□□ -1.97
CALD1-214ENST00000466704 ZNF702PQ9H963 129 aa2.72□□□□□ -1.97
CALD1-214ENST00000466704 LRTM1Q9HBL6 345 aa2.72□□□□□ -1.97
CALD1-214ENST00000466704 MEPEQ9NQ76 525 aaPredicted RBP2.72□□□□□ -1.97
CALD1-214ENST00000466704 PNO1Q9NRX1 252 aaKnown RBP2.72□□□□□ -1.97
CALD1-214ENST00000466704 C1orf109Q9NX04 203 aa2.72□□□□□ -1.97
CALD1-214ENST00000466704 GHRLQ9UBU3 117 aa2.72□□□□□ -1.97
CALD1-214ENST00000466704 PSME2Q9UL46 239 aa2.72□□□□□ -1.97
CALD1-214ENST00000466704 EXOSC1Q9Y3B2 195 aaKnown RBP2.72□□□□□ -1.97
CALD1-214ENST00000466704 POLR3HQ9Y535 204 aaPredicted RBP2.72□□□□□ -1.97
CALD1-214ENST00000466704 DNAJC15Q9Y5T4 150 aa2.72□□□□□ -1.97
CALD1-214ENST00000466704 CLCA3PQ9Y6N3 262 aa2.72□□□□□ -1.97
CALD1-214ENST00000466704 POLQO75417 2590 aa2.72□□□□□ -1.97
CALD1-214ENST00000466704 SPG11Q96JI7 2443 aa2.72□□□□□ -1.97
CALD1-214ENST00000466704 F8P00451 2351 aa2.71□□□□□ -1.98
CALD1-214ENST00000466704 NAV3Q8IVL0 2385 aa2.71□□□□□ -1.98
CALD1-214ENST00000466704 TRBV11-1A0A0K0K1C0 115 aa2.71□□□□□ -1.98
CALD1-214ENST00000466704 LSM1O15116 133 aaKnown RBP2.71□□□□□ -1.98
CALD1-214ENST00000466704 ATP8B1O43520 1251 aa2.71□□□□□ -1.98
CALD1-214ENST00000466704 DPM1O60762 260 aa2.71□□□□□ -1.98
CALD1-214ENST00000466704 SNNO75324 88 aaPredicted RBP2.71□□□□□ -1.98
CALD1-214ENST00000466704 PRPS2P11908 318 aa2.71□□□□□ -1.98
CALD1-214ENST00000466704 CPN1P15169 458 aa2.71□□□□□ -1.98
CALD1-214ENST00000466704 NT5EP21589 574 aa2.71□□□□□ -1.98
CALD1-214ENST00000466704 MPIP34949 423 aa2.71□□□□□ -1.98
CALD1-214ENST00000466704 RPL14P50914 215 aaKnown RBP2.71□□□□□ -1.98
CALD1-214ENST00000466704 XKP51811 444 aa2.71□□□□□ -1.98
CALD1-214ENST00000466704 WNT4P56705 351 aa2.71□□□□□ -1.98
CALD1-214ENST00000466704 RPL38P63173 70 aaKnown RBP2.71□□□□□ -1.98
CALD1-214ENST00000466704 ARG2P78540 354 aa2.71□□□□□ -1.98
CALD1-214ENST00000466704 OC90Q02509 493 aaPredicted RBP2.71□□□□□ -1.98
CALD1-214ENST00000466704 C2orf80Q0P641 193 aa2.71□□□□□ -1.98
CALD1-214ENST00000466704 ZP4Q12836 540 aa2.71□□□□□ -1.98
CALD1-214ENST00000466704 KLRB1Q12918 225 aa2.71□□□□□ -1.98
CALD1-214ENST00000466704 CYP51A1Q16850 503 aa2.71□□□□□ -1.98
CALD1-214ENST00000466704 ATP6AP1LQ52LC2 224 aa2.71□□□□□ -1.98
CALD1-214ENST00000466704 HSP90B2PQ58FF3 399 aa2.71□□□□□ -1.98
CALD1-214ENST00000466704 XKR7Q5GH72 579 aa2.71□□□□□ -1.98
CALD1-214ENST00000466704 DMKNQ6E0U4 476 aaPredicted RBP2.71□□□□□ -1.98
CALD1-214ENST00000466704 FAM71E1Q6IPT2 247 aa2.71□□□□□ -1.98
CALD1-214ENST00000466704 RAB12Q6IQ22 244 aa2.71□□□□□ -1.98
CALD1-214ENST00000466704 UFSP1Q6NVU6 142 aa2.71□□□□□ -1.98
CALD1-214ENST00000466704 NOXRED1Q6NXP6 359 aa2.71□□□□□ -1.98
CALD1-214ENST00000466704 IGFL2Q6UWQ7 119 aa2.71□□□□□ -1.98
CALD1-214ENST00000466704 FAM159AQ6UWV7 190 aa2.71□□□□□ -1.98
CALD1-214ENST00000466704 ISLR2Q6UXK2 745 aa2.71□□□□□ -1.98
CALD1-214ENST00000466704 HACD2Q6Y1H2 254 aa2.71□□□□□ -1.98
CALD1-214ENST00000466704 HSDL2Q6YN16 418 aa2.71□□□□□ -1.98
CALD1-214ENST00000466704 DGAT2L6Q6ZPD8 337 aa2.71□□□□□ -1.98
CALD1-214ENST00000466704 Q6ZVH6 145 aa2.71□□□□□ -1.98
CALD1-214ENST00000466704 NET1Q7Z628 596 aaPredicted RBP2.71□□□□□ -1.98
CALD1-214ENST00000466704 RPS19BP1Q86WX3 136 aaKnown RBP2.71□□□□□ -1.98
CALD1-214ENST00000466704 CRLF3Q8IUI8 442 aa2.71□□□□□ -1.98
CALD1-214ENST00000466704 ST13P4Q8IZP2 240 aaPredicted RBP2.71□□□□□ -1.98
CALD1-214ENST00000466704 LRRC25Q8N386 305 aaPredicted RBP2.71□□□□□ -1.98
CALD1-214ENST00000466704 KIF2BQ8N4N8 673 aa2.71□□□□□ -1.98
CALD1-214ENST00000466704 ZADH2Q8N4Q0 377 aa2.71□□□□□ -1.98
CALD1-214ENST00000466704 FNDC5Q8NAU1 212 aa2.71□□□□□ -1.98
CALD1-214ENST00000466704 MORN4Q8NDC4 146 aa2.71□□□□□ -1.98
CALD1-214ENST00000466704 B3GNT7Q8NFL0 401 aa2.71□□□□□ -1.98
CALD1-214ENST00000466704 OR5L2Q8NGL0 311 aa2.71□□□□□ -1.98
CALD1-214ENST00000466704 RAB3IL1Q8TBN0 382 aa2.71□□□□□ -1.98
CALD1-214ENST00000466704 DOK4Q8TEW6 326 aa2.71□□□□□ -1.98
CALD1-214ENST00000466704 C16orf78Q8WTQ4 265 aa2.71□□□□□ -1.98
CALD1-214ENST00000466704 DYDC1Q8WWB3 177 aa2.71□□□□□ -1.98
CALD1-214ENST00000466704 PSMF1Q92530 271 aa2.71□□□□□ -1.98
CALD1-214ENST00000466704 ZNF75CPQ92670 426 aaPredicted RBP2.71□□□□□ -1.98
CALD1-214ENST00000466704 NCLNQ969V3 563 aa2.71□□□□□ -1.98
CALD1-214ENST00000466704 TUBGCP3Q96CW5 907 aa2.71□□□□□ -1.98
CALD1-214ENST00000466704 C19orf60Q96EN9 201 aa2.71□□□□□ -1.98
CALD1-214ENST00000466704 PPP1R36Q96LQ0 422 aa2.71□□□□□ -1.98
CALD1-214ENST00000466704 PPP3R2Q96LZ3 170 aa2.71□□□□□ -1.98
CALD1-214ENST00000466704 TSSK3Q96PN8 268 aa2.71□□□□□ -1.98
CALD1-214ENST00000466704 SORT1Q99523 831 aa2.71□□□□□ -1.98
CALD1-214ENST00000466704 PELOQ9BRX2 385 aaKnown RBP2.71□□□□□ -1.98
CALD1-214ENST00000466704 EBPLQ9BY08 206 aa2.71□□□□□ -1.98
CALD1-214ENST00000466704 OR8D2Q9GZM6 311 aa2.71□□□□□ -1.98
CALD1-214ENST00000466704 Q9H3A6 140 aa2.71□□□□□ -1.98
CALD1-214ENST00000466704 ADAP2Q9NPF8 381 aa2.71□□□□□ -1.98
CALD1-214ENST00000466704 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.71□□□□□ -1.98
CALD1-214ENST00000466704 STMN3Q9NZ72 180 aa2.71□□□□□ -1.98
CALD1-214ENST00000466704 RPS6KB2Q9UBS0 482 aa2.71□□□□□ -1.98
CALD1-214ENST00000466704 MARCOQ9UEW3 520 aaPredicted RBP2.71□□□□□ -1.98
CALD1-214ENST00000466704 ZNF223Q9UK11 482 aaPredicted RBP2.71□□□□□ -1.98
CALD1-214ENST00000466704 CES1P1Q9UKY3 287 aa2.71□□□□□ -1.98
CALD1-214ENST00000466704 TMED5Q9Y3A6 229 aa2.71□□□□□ -1.98
CALD1-214ENST00000466704 ZNF780BQ9Y6R6 833 aa2.71□□□□□ -1.98
CALD1-214ENST00000466704 TDRD6O60522 2096 aaKnown RBP2.71□□□□□ -1.98
CALD1-214ENST00000466704 KALRNO60229 2985 aa2.71□□□□□ -1.98
CALD1-214ENST00000466704 ABCA2Q9BZC7 2435 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms