RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 VCXQ9H320 206 aa17.25■□□□□ 0.35
SKA3-205ENST00000465471 CHODLQ9H9P2 273 aa17.25■□□□□ 0.35
SKA3-205ENST00000465471 MRPS18AQ9NVS2 196 aaKnown RBP17.25■□□□□ 0.35
SKA3-205ENST00000465471 IKZF2Q9UKS7 526 aa17.25■□□□□ 0.35
SKA3-205ENST00000465471 N6AMT1Q9Y5N5 214 aa17.25■□□□□ 0.35
SKA3-205ENST00000465471 H0YHG0 523 aa17.24■□□□□ 0.35
SKA3-205ENST00000465471 H0YJX3 145 aa17.24■□□□□ 0.35
SKA3-205ENST00000465471 MAGEB4O15481 346 aaPredicted RBP17.24■□□□□ 0.35
SKA3-205ENST00000465471 COL8A2P25067 703 aa17.24■□□□□ 0.35
SKA3-205ENST00000465471 ATP6V1E1P36543 226 aa17.24■□□□□ 0.35
SKA3-205ENST00000465471 CAPGP40121 348 aa17.24■□□□□ 0.35
SKA3-205ENST00000465471 NR4A2P43354 598 aa17.24■□□□□ 0.35
SKA3-205ENST00000465471 ISL1P61371 349 aa17.24■□□□□ 0.35
SKA3-205ENST00000465471 TIGD6Q17RP2 521 aa17.24■□□□□ 0.35
SKA3-205ENST00000465471 ZNF829Q3KNS6 432 aaPredicted RBP17.24■□□□□ 0.35
SKA3-205ENST00000465471 SPRNQ5BIV9 151 aa17.24■□□□□ 0.35
SKA3-205ENST00000465471 OR2Z1Q8NG97 314 aa17.24■□□□□ 0.35
SKA3-205ENST00000465471 OR13G1Q8NGZ3 307 aa17.24■□□□□ 0.35
SKA3-205ENST00000465471 BRD7Q9NPI1 651 aa17.24■□□□□ 0.35
SKA3-205ENST00000465471 DECR2Q9NUI1 292 aa17.24■□□□□ 0.35
SKA3-205ENST00000465471 IL19Q9UHD0 177 aa17.24■□□□□ 0.35
SKA3-205ENST00000465471 NUFIP1Q9UHK0 495 aaKnown RBP17.24■□□□□ 0.35
SKA3-205ENST00000465471 ZNF391Q9UJN7 358 aa17.24■□□□□ 0.35
SKA3-205ENST00000465471 A0A0U1RQV5 110 aa17.23■□□□□ 0.35
SKA3-205ENST00000465471 TMEM269A0A1B0GVZ9 245 aa17.23■□□□□ 0.35
SKA3-205ENST00000465471 SULT1C4O75897 302 aa17.23■□□□□ 0.35
SKA3-205ENST00000465471 PNPP00491 289 aa17.23■□□□□ 0.35
SKA3-205ENST00000465471 IGLV3-1P01715 115 aa17.23■□□□□ 0.35
SKA3-205ENST00000465471 INHBBP09529 407 aa17.23■□□□□ 0.35
SKA3-205ENST00000465471 CFL1P23528 166 aaKnown RBP17.23■□□□□ 0.35
SKA3-205ENST00000465471 ACTC1P68032 377 aa17.23■□□□□ 0.35
SKA3-205ENST00000465471 ACTA1P68133 377 aa17.23■□□□□ 0.35
SKA3-205ENST00000465471 TNFAIP6P98066 277 aaPredicted RBP17.23■□□□□ 0.35
SKA3-205ENST00000465471 IL5RAQ01344 420 aa17.23■□□□□ 0.35
SKA3-205ENST00000465471 LOXL1Q08397 574 aaPredicted RBP17.23■□□□□ 0.35
SKA3-205ENST00000465471 MFGE8Q08431 387 aaPredicted RBP17.23■□□□□ 0.35
SKA3-205ENST00000465471 OR8B8Q15620 311 aa17.23■□□□□ 0.35
SKA3-205ENST00000465471 SETD9Q8NE22 299 aa17.23■□□□□ 0.35
SKA3-205ENST00000465471 OR56B2PQ8NGI1 322 aa17.23■□□□□ 0.35
SKA3-205ENST00000465471 LYZL4Q96KX0 146 aa17.23■□□□□ 0.35
SKA3-205ENST00000465471 BPESC1Q9GZL8 116 aa17.23■□□□□ 0.35
SKA3-205ENST00000465471 EGLN1Q9GZT9 426 aa17.23■□□□□ 0.35
SKA3-205ENST00000465471 MOB1AQ9H8S9 216 aa17.23■□□□□ 0.35
SKA3-205ENST00000465471 MRPL15Q9P015 296 aaKnown RBP17.23■□□□□ 0.35
SKA3-205ENST00000465471 PCDHGB1Q9Y5G3 927 aa17.23■□□□□ 0.35
SKA3-205ENST00000465471 R4GMQ9 66 aa17.23■□□□□ 0.35
SKA3-205ENST00000465471 HSPE1-MOB4S4R3N1 261 aa17.23■□□□□ 0.35
SKA3-205ENST00000465471 IGHV1-69-2A0A0G2JMI3 117 aa17.22■□□□□ 0.35
SKA3-205ENST00000465471 GGT3PA6NGU5 568 aa17.22■□□□□ 0.35
SKA3-205ENST00000465471 IGHA1P01876 353 aa17.22■□□□□ 0.35
SKA3-205ENST00000465471 GNAO1P09471 354 aa17.22■□□□□ 0.35
SKA3-205ENST00000465471 DDOSTP39656 456 aa17.22■□□□□ 0.35
SKA3-205ENST00000465471 RAB40BQ12829 278 aa17.22■□□□□ 0.35
SKA3-205ENST00000465471 CARTPTQ16568 116 aa17.22■□□□□ 0.35
SKA3-205ENST00000465471 SMN1Q16637 294 aaKnown RBP17.22■□□□□ 0.35
SKA3-205ENST00000465471 ZNF540Q8NDQ6 660 aa17.22■□□□□ 0.35
SKA3-205ENST00000465471 OR10AD1Q8NGE0 317 aa17.22■□□□□ 0.35
SKA3-205ENST00000465471 CNIH3Q8TBE1 160 aa17.22■□□□□ 0.35
SKA3-205ENST00000465471 FBLIM1Q8WUP2 373 aa17.22■□□□□ 0.35
SKA3-205ENST00000465471 SPRYD4Q8WW59 207 aaPredicted RBP17.22■□□□□ 0.35
SKA3-205ENST00000465471 TFAP2CQ92754 450 aa17.22■□□□□ 0.35
SKA3-205ENST00000465471 PBOV1Q9GZY1 135 aa17.22■□□□□ 0.35
SKA3-205ENST00000465471 SLC22A4Q9H015 551 aa17.22■□□□□ 0.35
SKA3-205ENST00000465471 AMBNQ9NP70 447 aa17.22■□□□□ 0.35
SKA3-205ENST00000465471 G6PC2Q9NQR9 355 aa17.22■□□□□ 0.35
SKA3-205ENST00000465471 ZNF275Q9NSD4 429 aaPredicted RBP17.22■□□□□ 0.35
SKA3-205ENST00000465471 TMEM100Q9NV29 134 aa17.22■□□□□ 0.35
SKA3-205ENST00000465471 RPL36Q9Y3U8 105 aaKnown RBP17.22■□□□□ 0.35
SKA3-205ENST00000465471 METTL15A6NJ78 407 aa17.21■□□□□ 0.35
SKA3-205ENST00000465471 H0YL77 283 aa17.21■□□□□ 0.35
SKA3-205ENST00000465471 KRT8P05787 483 aa17.21■□□□□ 0.35
SKA3-205ENST00000465471 TNFSF4P23510 183 aa17.21■□□□□ 0.35
SKA3-205ENST00000465471 GSK3AP49840 483 aa17.21■□□□□ 0.35
SKA3-205ENST00000465471 CDONQ4KMG0 1287 aa17.21■□□□□ 0.35
SKA3-205ENST00000465471 PLEKHG7Q6ZR37 379 aa17.21■□□□□ 0.35
SKA3-205ENST00000465471 ZNF771Q7L3S4 317 aaPredicted RBP17.21■□□□□ 0.35
SKA3-205ENST00000465471 ACBD7Q8N6N7 88 aa17.21■□□□□ 0.35
SKA3-205ENST00000465471 RNF166Q96A37 237 aaPredicted RBP17.21■□□□□ 0.35
SKA3-205ENST00000465471 OR2V2Q96R30 315 aa17.21■□□□□ 0.35
SKA3-205ENST00000465471 ZNF649Q9BS31 505 aa17.21■□□□□ 0.35
SKA3-205ENST00000465471 CACNG2Q9Y698 323 aa17.21■□□□□ 0.35
SKA3-205ENST00000465471 YLPM1P49750 1951 aaKnown RBP17.2■□□□□ 0.34
SKA3-205ENST00000465471 MTORP42345 2549 aa17.2■□□□□ 0.34
SKA3-205ENST00000465471 TPD52L2O43399 206 aaKnown RBP17.2■□□□□ 0.34
SKA3-205ENST00000465471 CDC14BO60729 498 aa17.2■□□□□ 0.34
SKA3-205ENST00000465471 ATP6V1G2O95670 118 aa17.2■□□□□ 0.34
SKA3-205ENST00000465471 TTRP02766 147 aa17.2■□□□□ 0.34
SKA3-205ENST00000465471 HLA-DPB1P04440 258 aa17.2■□□□□ 0.34
SKA3-205ENST00000465471 TACSTD2P09758 323 aa17.2■□□□□ 0.34
SKA3-205ENST00000465471 AQP4P55087 323 aa17.2■□□□□ 0.34
SKA3-205ENST00000465471 TMEM33P57088 247 aa17.2■□□□□ 0.34
SKA3-205ENST00000465471 GFOD2Q3B7J2 385 aa17.2■□□□□ 0.34
SKA3-205ENST00000465471 LIPNQ5VXI9 398 aa17.2■□□□□ 0.34
SKA3-205ENST00000465471 KRT74Q7RTS7 529 aa17.2■□□□□ 0.34
SKA3-205ENST00000465471 YIPF7Q8N8F6 280 aa17.2■□□□□ 0.34
SKA3-205ENST00000465471 ITLN1Q8WWA0 313 aa17.2■□□□□ 0.34
SKA3-205ENST00000465471 ITFG2Q969R8 447 aa17.2■□□□□ 0.34
SKA3-205ENST00000465471 MEGF10Q96KG7 1140 aa17.2■□□□□ 0.34
SKA3-205ENST00000465471 SIGLEC11Q96RL6 698 aa17.2■□□□□ 0.34
SKA3-205ENST00000465471 SOX7Q9BT81 388 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms