RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 HERPUD1Q15011 391 aa12.01□□□□□ -0.49
MCF2L-220ENST00000464800 ZNF826PQ6ZT77 177 aa12.01□□□□□ -0.49
MCF2L-220ENST00000464800 TSEN54Q7Z6J9 526 aaKnown RBP12.01□□□□□ -0.49
MCF2L-220ENST00000464800 NAA40Q86UY6 237 aa12.01□□□□□ -0.49
MCF2L-220ENST00000464800 CMTM4Q8IZR5 234 aa12.01□□□□□ -0.49
MCF2L-220ENST00000464800 GCSAMQ8N6F7 178 aa12.01□□□□□ -0.49
MCF2L-220ENST00000464800 OR5R1Q8NH85 324 aa12.01□□□□□ -0.49
MCF2L-220ENST00000464800 RP9Q8TA86 221 aaKnown RBP12.01□□□□□ -0.49
MCF2L-220ENST00000464800 SLC7A13Q8TCU3 470 aa12.01□□□□□ -0.49
MCF2L-220ENST00000464800 MRPL15Q9P015 296 aaKnown RBP12.01□□□□□ -0.49
MCF2L-220ENST00000464800 ENPP4Q9Y6X5 453 aa12.01□□□□□ -0.49
MCF2L-220ENST00000464800 IGHV3OR15-7A0A075B7D8 119 aa12□□□□□ -0.49
MCF2L-220ENST00000464800 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12□□□□□ -0.49
MCF2L-220ENST00000464800 GGT3PA6NGU5 568 aa12□□□□□ -0.49
MCF2L-220ENST00000464800 M0R135 149 aa12□□□□□ -0.49
MCF2L-220ENST00000464800 PAHP00439 452 aa12□□□□□ -0.49
MCF2L-220ENST00000464800 GRPP07492 148 aa12□□□□□ -0.49
MCF2L-220ENST00000464800 SLC7A2P52569 658 aa12□□□□□ -0.49
MCF2L-220ENST00000464800 FXYD6P3P58550 94 aa12□□□□□ -0.49
MCF2L-220ENST00000464800 MZT1Q08AG7 82 aa12□□□□□ -0.49
MCF2L-220ENST00000464800 SNAI3Q3KNW1 292 aa12□□□□□ -0.49
MCF2L-220ENST00000464800 SLC36A3Q495N2 470 aa12□□□□□ -0.49
MCF2L-220ENST00000464800 FGD3Q5JSP0 725 aa12□□□□□ -0.49
MCF2L-220ENST00000464800 TEX36Q5VZQ5 186 aa12□□□□□ -0.49
MCF2L-220ENST00000464800 OR6V1Q8N148 313 aa12□□□□□ -0.49
MCF2L-220ENST00000464800 SPERTQ8NA61 448 aa12□□□□□ -0.49
MCF2L-220ENST00000464800 ZNF799Q96GE5 643 aa12□□□□□ -0.49
MCF2L-220ENST00000464800 ERMAPQ96PL5 475 aaPredicted RBP12□□□□□ -0.49
MCF2L-220ENST00000464800 PPA2Q9H2U2 334 aa12□□□□□ -0.49
MCF2L-220ENST00000464800 SRA1Q9HD15 236 aaKnown RBP12□□□□□ -0.49
MCF2L-220ENST00000464800 KRCC1Q9NPI7 259 aaPredicted RBP12□□□□□ -0.49
MCF2L-220ENST00000464800 PNRC2Q9NPJ4 139 aaKnown RBP12□□□□□ -0.49
MCF2L-220ENST00000464800 SIRT7Q9NRC8 400 aa12□□□□□ -0.49
MCF2L-220ENST00000464800 ARGLU1Q9NWB6 273 aaPredicted RBP12□□□□□ -0.49
MCF2L-220ENST00000464800 C14orf119Q9NWQ9 140 aa12□□□□□ -0.49
MCF2L-220ENST00000464800 FBLN5Q9UBX5 448 aa12□□□□□ -0.49
MCF2L-220ENST00000464800 CYB5R1Q9UHQ9 305 aa12□□□□□ -0.49
MCF2L-220ENST00000464800 B9D1Q9UPM9 204 aa12□□□□□ -0.49
MCF2L-220ENST00000464800 A0A1W2PRQ8 180 aa11.99□□□□□ -0.49
MCF2L-220ENST00000464800 UNC119BA6NIH7 251 aa11.99□□□□□ -0.49
MCF2L-220ENST00000464800 NME4O00746 187 aa11.99□□□□□ -0.49
MCF2L-220ENST00000464800 NPFFO15130 113 aa11.99□□□□□ -0.49
MCF2L-220ENST00000464800 SASH3O75995 380 aa11.99□□□□□ -0.49
MCF2L-220ENST00000464800 RENP00797 406 aa11.99□□□□□ -0.49
MCF2L-220ENST00000464800 HLA-DQA2P01906 255 aa11.99□□□□□ -0.49
MCF2L-220ENST00000464800 H1F0P07305 194 aaKnown RBP11.99□□□□□ -0.49
MCF2L-220ENST00000464800 COX4I1P13073 169 aa11.99□□□□□ -0.49
MCF2L-220ENST00000464800 H2AFXP16104 143 aaPredicted RBP11.99□□□□□ -0.49
MCF2L-220ENST00000464800 OMPP47874 163 aa11.99□□□□□ -0.49
MCF2L-220ENST00000464800 ZNF92Q03936 586 aa11.99□□□□□ -0.49
MCF2L-220ENST00000464800 POU4F2Q12837 409 aa11.99□□□□□ -0.49
MCF2L-220ENST00000464800 DGCR6Q14129 220 aa11.99□□□□□ -0.49
MCF2L-220ENST00000464800 MICBQ29980 383 aa11.99□□□□□ -0.49
MCF2L-220ENST00000464800 RFX4Q33E94 735 aa11.99□□□□□ -0.49
MCF2L-220ENST00000464800 SLC35E4Q6ICL7 350 aa11.99□□□□□ -0.49
MCF2L-220ENST00000464800 SMARCD3Q6STE5 483 aa11.99□□□□□ -0.49
MCF2L-220ENST00000464800 FGFRL1Q8N441 504 aa11.99□□□□□ -0.49
MCF2L-220ENST00000464800 LY6G5BQ8NDX9 201 aa11.99□□□□□ -0.49
MCF2L-220ENST00000464800 OR2AE1Q8NHA4 323 aa11.99□□□□□ -0.49
MCF2L-220ENST00000464800 MRAPQ8TCY5 172 aa11.99□□□□□ -0.49
MCF2L-220ENST00000464800 SPTSSAQ969W0 71 aa11.99□□□□□ -0.49
MCF2L-220ENST00000464800 PPP1R14AQ96A00 147 aa11.99□□□□□ -0.49
MCF2L-220ENST00000464800 FAM162AQ96A26 154 aa11.99□□□□□ -0.49
MCF2L-220ENST00000464800 DMRTB1Q96MA1 342 aa11.99□□□□□ -0.49
MCF2L-220ENST00000464800 NMNAT3Q96T66 252 aa11.99□□□□□ -0.49
MCF2L-220ENST00000464800 HOPXQ9BPY8 73 aaPredicted RBP11.99□□□□□ -0.49
MCF2L-220ENST00000464800 RPRD1BQ9NQG5 326 aaKnown RBP11.99□□□□□ -0.49
MCF2L-220ENST00000464800 A0A1B0GW55 424 aa11.98□□□□□ -0.49
MCF2L-220ENST00000464800 A0A1W2PRD5 423 aa11.98□□□□□ -0.49
MCF2L-220ENST00000464800 A0A1W2PRF3 423 aa11.98□□□□□ -0.49
MCF2L-220ENST00000464800 A0A1W2PRM7 423 aa11.98□□□□□ -0.49
MCF2L-220ENST00000464800 RNASEK-C17orf49H0YIS7 233 aa11.98□□□□□ -0.49
MCF2L-220ENST00000464800 BHLHE40O14503 412 aa11.98□□□□□ -0.49
MCF2L-220ENST00000464800 GPR37O15354 613 aa11.98□□□□□ -0.49
MCF2L-220ENST00000464800 LHBP01229 141 aa11.98□□□□□ -0.49
MCF2L-220ENST00000464800 DUX4L2P0CJ85 424 aa11.98□□□□□ -0.49
MCF2L-220ENST00000464800 DUX4L3P0CJ86 424 aa11.98□□□□□ -0.49
MCF2L-220ENST00000464800 DUX4L4P0CJ87 422 aa11.98□□□□□ -0.49
MCF2L-220ENST00000464800 DUX4L5P0CJ88 424 aa11.98□□□□□ -0.49
MCF2L-220ENST00000464800 DUX4L6P0CJ89 424 aa11.98□□□□□ -0.49
MCF2L-220ENST00000464800 DUX4L7P0CJ90 424 aa11.98□□□□□ -0.49
MCF2L-220ENST00000464800 MUC1P15941 1255 aaPredicted RBP11.98□□□□□ -0.49
MCF2L-220ENST00000464800 NCK1P16333 377 aa11.98□□□□□ -0.49
MCF2L-220ENST00000464800 SAA4P35542 130 aa11.98□□□□□ -0.49
MCF2L-220ENST00000464800 GSK3BP49841 420 aa11.98□□□□□ -0.49
MCF2L-220ENST00000464800 PRB3Q04118 309 aaPredicted RBP11.98□□□□□ -0.49
MCF2L-220ENST00000464800 DBPQ10586 325 aaPredicted RBP11.98□□□□□ -0.49
MCF2L-220ENST00000464800 KLRD1Q13241 179 aa11.98□□□□□ -0.49
MCF2L-220ENST00000464800 PCK2Q16822 640 aa11.98□□□□□ -0.49
MCF2L-220ENST00000464800 GLYATL3Q5SZD4 288 aa11.98□□□□□ -0.49
MCF2L-220ENST00000464800 C11orf88Q6PI97 169 aa11.98□□□□□ -0.49
MCF2L-220ENST00000464800 DUX4L9Q6RFH8 374 aaPredicted RBP11.98□□□□□ -0.49
MCF2L-220ENST00000464800 SLC36A1Q7Z2H8 476 aa11.98□□□□□ -0.49
MCF2L-220ENST00000464800 LNX2Q8N448 690 aa11.98□□□□□ -0.49
MCF2L-220ENST00000464800 OR56B2PQ8NGI1 322 aa11.98□□□□□ -0.49
MCF2L-220ENST00000464800 FANK1Q8TC84 345 aa11.98□□□□□ -0.49
MCF2L-220ENST00000464800 MAP6Q96JE9 813 aa11.98□□□□□ -0.49
MCF2L-220ENST00000464800 CCL13Q99616 98 aa11.98□□□□□ -0.49
MCF2L-220ENST00000464800 NDUFAF4Q9P032 175 aa11.98□□□□□ -0.49
MCF2L-220ENST00000464800 DNAJB11Q9UBS4 358 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms