RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 VWC2LB2RUY7 222 aa12.32□□□□□ -0.44
SQSTM1-205ENST00000464493 H0YAE9 185 aa12.32□□□□□ -0.44
SQSTM1-205ENST00000464493 J3QRE1 110 aa12.32□□□□□ -0.44
SQSTM1-205ENST00000464493 CDC14BO60729 498 aa12.32□□□□□ -0.44
SQSTM1-205ENST00000464493 KRT8P05787 483 aa12.32□□□□□ -0.44
SQSTM1-205ENST00000464493 ACHEP22303 614 aa12.32□□□□□ -0.44
SQSTM1-205ENST00000464493 GIFP27352 417 aa12.32□□□□□ -0.44
SQSTM1-205ENST00000464493 CAPGP40121 348 aa12.32□□□□□ -0.44
SQSTM1-205ENST00000464493 NR4A2P43354 598 aa12.32□□□□□ -0.44
SQSTM1-205ENST00000464493 MMP16P51512 607 aa12.32□□□□□ -0.44
SQSTM1-205ENST00000464493 FAM3AP98173 230 aa12.32□□□□□ -0.44
SQSTM1-205ENST00000464493 ZNF91Q05481 1191 aa12.32□□□□□ -0.44
SQSTM1-205ENST00000464493 IL18R1Q13478 541 aa12.32□□□□□ -0.44
SQSTM1-205ENST00000464493 RIN1Q13671 783 aa12.32□□□□□ -0.44
SQSTM1-205ENST00000464493 GFOD2Q3B7J2 385 aa12.32□□□□□ -0.44
SQSTM1-205ENST00000464493 ZNF829Q3KNS6 432 aaPredicted RBP12.32□□□□□ -0.44
SQSTM1-205ENST00000464493 SETD9Q8NE22 299 aa12.32□□□□□ -0.44
SQSTM1-205ENST00000464493 NRG4Q8WWG1 115 aa12.32□□□□□ -0.44
SQSTM1-205ENST00000464493 LGALS12Q96DT0 336 aa12.32□□□□□ -0.44
SQSTM1-205ENST00000464493 AMBNQ9NP70 447 aa12.32□□□□□ -0.44
SQSTM1-205ENST00000464493 FAM206AQ9NX38 181 aa12.32□□□□□ -0.44
SQSTM1-205ENST00000464493 IL19Q9UHD0 177 aa12.32□□□□□ -0.44
SQSTM1-205ENST00000464493 MRM2Q9UI43 246 aaKnown RBP12.32□□□□□ -0.44
SQSTM1-205ENST00000464493 EXOGQ9Y2C4 368 aaKnown RBP12.32□□□□□ -0.44
SQSTM1-205ENST00000464493 RPL36Q9Y3U8 105 aaKnown RBP12.32□□□□□ -0.44
SQSTM1-205ENST00000464493 ZANQ9Y493 2812 aa12.31□□□□□ -0.44
SQSTM1-205ENST00000464493 A0A1B0GWJ7 208 aa12.31□□□□□ -0.44
SQSTM1-205ENST00000464493 DAPL1A0PJW8 107 aa12.31□□□□□ -0.44
SQSTM1-205ENST00000464493 METTL15A6NJ78 407 aa12.31□□□□□ -0.44
SQSTM1-205ENST00000464493 H0YL77 283 aa12.31□□□□□ -0.44
SQSTM1-205ENST00000464493 WBP4O75554 376 aaKnown RBP12.31□□□□□ -0.44
SQSTM1-205ENST00000464493 RP2O75695 350 aa12.31□□□□□ -0.44
SQSTM1-205ENST00000464493 SULT1C4O75897 302 aa12.31□□□□□ -0.44
SQSTM1-205ENST00000464493 HLA-DPB1P04440 258 aa12.31□□□□□ -0.44
SQSTM1-205ENST00000464493 DBTP11182 482 aaKnown RBP12.31□□□□□ -0.44
SQSTM1-205ENST00000464493 TNFRSF1AP19438 455 aa12.31□□□□□ -0.44
SQSTM1-205ENST00000464493 DDOSTP39656 456 aa12.31□□□□□ -0.44
SQSTM1-205ENST00000464493 TMEM33P57088 247 aa12.31□□□□□ -0.44
SQSTM1-205ENST00000464493 ISL1P61371 349 aa12.31□□□□□ -0.44
SQSTM1-205ENST00000464493 ACTC1P68032 377 aa12.31□□□□□ -0.44
SQSTM1-205ENST00000464493 ACTA1P68133 377 aa12.31□□□□□ -0.44
SQSTM1-205ENST00000464493 ZNF85Q03923 595 aa12.31□□□□□ -0.44
SQSTM1-205ENST00000464493 HFEQ30201 348 aa12.31□□□□□ -0.44
SQSTM1-205ENST00000464493 SPRNQ5BIV9 151 aa12.31□□□□□ -0.44
SQSTM1-205ENST00000464493 PLEKHG7Q6ZR37 379 aa12.31□□□□□ -0.44
SQSTM1-205ENST00000464493 ACBD7Q8N6N7 88 aa12.31□□□□□ -0.44
SQSTM1-205ENST00000464493 YIPF7Q8N8F6 280 aa12.31□□□□□ -0.44
SQSTM1-205ENST00000464493 MAPK1IP1LQ8NDC0 245 aa12.31□□□□□ -0.44
SQSTM1-205ENST00000464493 OR10AD1Q8NGE0 317 aa12.31□□□□□ -0.44
SQSTM1-205ENST00000464493 OR8B12Q8NGG6 310 aa12.31□□□□□ -0.44
SQSTM1-205ENST00000464493 OR56B2PQ8NGI1 322 aa12.31□□□□□ -0.44
SQSTM1-205ENST00000464493 BPESC1Q9GZL8 116 aa12.31□□□□□ -0.44
SQSTM1-205ENST00000464493 PBOV1Q9GZY1 135 aa12.31□□□□□ -0.44
SQSTM1-205ENST00000464493 SLC22A4Q9H015 551 aa12.31□□□□□ -0.44
SQSTM1-205ENST00000464493 ZNF275Q9NSD4 429 aaPredicted RBP12.31□□□□□ -0.44
SQSTM1-205ENST00000464493 MRPL15Q9P015 296 aaKnown RBP12.31□□□□□ -0.44
SQSTM1-205ENST00000464493 ZNF391Q9UJN7 358 aa12.31□□□□□ -0.44
SQSTM1-205ENST00000464493 A0A096LNT2 108 aa12.3□□□□□ -0.44
SQSTM1-205ENST00000464493 hCG_38984A0A1B0GV85 526 aa12.3□□□□□ -0.44
SQSTM1-205ENST00000464493 MLNRO43193 412 aa12.3□□□□□ -0.44
SQSTM1-205ENST00000464493 SRSF10O75494 262 aaKnown RBP12.3□□□□□ -0.44
SQSTM1-205ENST00000464493 RPP14O95059 124 aaKnown RBP12.3□□□□□ -0.44
SQSTM1-205ENST00000464493 FADS2O95864 444 aaKnown RBP12.3□□□□□ -0.44
SQSTM1-205ENST00000464493 PNPP00491 289 aa12.3□□□□□ -0.44
SQSTM1-205ENST00000464493 USF1P22415 310 aaPredicted RBP12.3□□□□□ -0.44
SQSTM1-205ENST00000464493 CA6P23280 308 aa12.3□□□□□ -0.44
SQSTM1-205ENST00000464493 GSK3AP49840 483 aa12.3□□□□□ -0.44
SQSTM1-205ENST00000464493 LOXL1Q08397 574 aaPredicted RBP12.3□□□□□ -0.44
SQSTM1-205ENST00000464493 RAB40BQ12829 278 aa12.3□□□□□ -0.44
SQSTM1-205ENST00000464493 RIPK1Q13546 671 aa12.3□□□□□ -0.44
SQSTM1-205ENST00000464493 SMN1Q16637 294 aaKnown RBP12.3□□□□□ -0.44
SQSTM1-205ENST00000464493 KLHL22Q53GT1 634 aa12.3□□□□□ -0.44
SQSTM1-205ENST00000464493 ZNF684Q5T5D7 378 aa12.3□□□□□ -0.44
SQSTM1-205ENST00000464493 LIPNQ5VXI9 398 aa12.3□□□□□ -0.44
SQSTM1-205ENST00000464493 CNIH3Q8TBE1 160 aa12.3□□□□□ -0.44
SQSTM1-205ENST00000464493 ITLN1Q8WWA0 313 aa12.3□□□□□ -0.44
SQSTM1-205ENST00000464493 CCL17Q92583 94 aa12.3□□□□□ -0.44
SQSTM1-205ENST00000464493 PPP1R14AQ96A00 147 aa12.3□□□□□ -0.44
SQSTM1-205ENST00000464493 OR2V2Q96R30 315 aa12.3□□□□□ -0.44
SQSTM1-205ENST00000464493 SIGLEC11Q96RL6 698 aa12.3□□□□□ -0.44
SQSTM1-205ENST00000464493 MRPS18AQ9NVS2 196 aaKnown RBP12.3□□□□□ -0.44
SQSTM1-205ENST00000464493 TREM2Q9NZC2 230 aa12.3□□□□□ -0.44
SQSTM1-205ENST00000464493 NUFIP1Q9UHK0 495 aaKnown RBP12.3□□□□□ -0.44
SQSTM1-205ENST00000464493 GTF2A1LQ9UNN4 478 aa12.3□□□□□ -0.44
SQSTM1-205ENST00000464493 NOP16Q9Y3C1 178 aaKnown RBP12.3□□□□□ -0.44
SQSTM1-205ENST00000464493 SNX5Q9Y5X3 404 aa12.3□□□□□ -0.44
SQSTM1-205ENST00000464493 CACNG2Q9Y698 323 aa12.3□□□□□ -0.44
SQSTM1-205ENST00000464493 R4GMQ9 66 aa12.3□□□□□ -0.44
SQSTM1-205ENST00000464493 HSPE1-MOB4S4R3N1 261 aa12.3□□□□□ -0.44
SQSTM1-205ENST00000464493 CR1P17927 2039 aa12.3□□□□□ -0.44
SQSTM1-205ENST00000464493 A0A0U1RQV5 110 aa12.29□□□□□ -0.44
SQSTM1-205ENST00000464493 ANKRD30BLA7E2S9 258 aa12.29□□□□□ -0.44
SQSTM1-205ENST00000464493 F5H5P2 479 aa12.29□□□□□ -0.44
SQSTM1-205ENST00000464493 LOC110117498-PIK3R3F6TDL0 507 aa12.29□□□□□ -0.44
SQSTM1-205ENST00000464493 H0YJX3 145 aa12.29□□□□□ -0.44
SQSTM1-205ENST00000464493 PPIHO43447 177 aaKnown RBP12.29□□□□□ -0.44
SQSTM1-205ENST00000464493 GMDSO60547 372 aa12.29□□□□□ -0.44
SQSTM1-205ENST00000464493 GNAO1P09471 354 aa12.29□□□□□ -0.44
SQSTM1-205ENST00000464493 GPR6P46095 362 aaPredicted RBP12.29□□□□□ -0.44
SQSTM1-205ENST00000464493 SRP9P49458 86 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms