RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 OR4S2Q8NH73 311 aa2.34□□□□□ -2.03
HMGXB4-205ENST00000464480 MITD1Q8WV92 249 aa2.34□□□□□ -2.03
HMGXB4-205ENST00000464480 ING5Q8WYH8 240 aa2.34□□□□□ -2.03
HMGXB4-205ENST00000464480 CREB3L1Q96BA8 519 aa2.34□□□□□ -2.03
HMGXB4-205ENST00000464480 BMFQ96LC9 184 aa2.34□□□□□ -2.03
HMGXB4-205ENST00000464480 SERPINB12Q96P63 405 aa2.34□□□□□ -2.03
HMGXB4-205ENST00000464480 QKIQ96PU8 341 aaKnown RBP eCLIP2.34□□□□□ -2.03
HMGXB4-205ENST00000464480 CHP1Q99653 195 aa2.34□□□□□ -2.03
HMGXB4-205ENST00000464480 C20orf24Q9BUV8 137 aa2.34□□□□□ -2.03
HMGXB4-205ENST00000464480 BBS2Q9BXC9 721 aa2.34□□□□□ -2.03
HMGXB4-205ENST00000464480 ZNF717Q9BY31 904 aaPredicted RBP2.34□□□□□ -2.03
HMGXB4-205ENST00000464480 ZYG11BQ9C0D3 744 aa2.34□□□□□ -2.03
HMGXB4-205ENST00000464480 CCDC90BQ9GZT6 254 aa2.34□□□□□ -2.03
HMGXB4-205ENST00000464480 PARP12Q9H0J9 701 aaKnown RBP2.34□□□□□ -2.03
HMGXB4-205ENST00000464480 C11orf49Q9H6J7 331 aa2.34□□□□□ -2.03
HMGXB4-205ENST00000464480 KCNJ16Q9NPI9 418 aa2.34□□□□□ -2.03
HMGXB4-205ENST00000464480 LHX9Q9NQ69 397 aa2.34□□□□□ -2.03
HMGXB4-205ENST00000464480 CHRAC1Q9NRG0 131 aa2.34□□□□□ -2.03
HMGXB4-205ENST00000464480 HRASLS2Q9NWW9 162 aa2.34□□□□□ -2.03
HMGXB4-205ENST00000464480 ENOPH1Q9UHY7 261 aa2.34□□□□□ -2.03
HMGXB4-205ENST00000464480 STOML2Q9UJZ1 356 aa2.34□□□□□ -2.03
HMGXB4-205ENST00000464480 RAB23Q9ULC3 237 aa2.34□□□□□ -2.03
HMGXB4-205ENST00000464480 RPL26L1Q9UNX3 145 aaKnown RBP2.34□□□□□ -2.03
HMGXB4-205ENST00000464480 PRELID3BQ9Y3B1 194 aa2.34□□□□□ -2.03
HMGXB4-205ENST00000464480 RB1CC1Q8TDY2 1594 aa2.34□□□□□ -2.03
HMGXB4-205ENST00000464480 RTL1A6NKG5 1358 aa2.34□□□□□ -2.04
HMGXB4-205ENST00000464480 CARMIL3Q8ND23 1372 aa2.34□□□□□ -2.04
HMGXB4-205ENST00000464480 TONSLQ96HA7 1378 aa2.34□□□□□ -2.04
HMGXB4-205ENST00000464480 CPSF1Q10570 1443 aaKnown RBP2.34□□□□□ -2.04
HMGXB4-205ENST00000464480 FHOD3Q2V2M9 1422 aa2.34□□□□□ -2.04
HMGXB4-205ENST00000464480 MYOM3Q5VTT5 1437 aa2.34□□□□□ -2.04
HMGXB4-205ENST00000464480 SETD5Q9C0A6 1442 aa2.34□□□□□ -2.04
HMGXB4-205ENST00000464480 WDR97A6NE52 1622 aa2.33□□□□□ -2.04
HMGXB4-205ENST00000464480 IGHV3-66A0A0C4DH42 116 aa2.33□□□□□ -2.04
HMGXB4-205ENST00000464480 GNG14A0A1W2PPG7 69 aa2.33□□□□□ -2.04
HMGXB4-205ENST00000464480 VPS37CA5D8V6 355 aaPredicted RBP2.33□□□□□ -2.04
HMGXB4-205ENST00000464480 SMIM23A6NLE4 172 aa2.33□□□□□ -2.04
HMGXB4-205ENST00000464480 INS-IGF2F8WCM5 200 aa2.33□□□□□ -2.04
HMGXB4-205ENST00000464480 KPNA4O00629 521 aaPredicted RBP2.33□□□□□ -2.04
HMGXB4-205ENST00000464480 SNAI2O43623 268 aa2.33□□□□□ -2.04
HMGXB4-205ENST00000464480 ANGPTL7O43827 346 aa2.33□□□□□ -2.04
HMGXB4-205ENST00000464480 CALUO43852 315 aaPredicted RBP2.33□□□□□ -2.04
HMGXB4-205ENST00000464480 DCTN3O75935 186 aa2.33□□□□□ -2.04
HMGXB4-205ENST00000464480 LYPLA2O95372 231 aa2.33□□□□□ -2.04
HMGXB4-205ENST00000464480 H6PDO95479 791 aa2.33□□□□□ -2.04
HMGXB4-205ENST00000464480 FAM107AO95990 144 aa2.33□□□□□ -2.04
HMGXB4-205ENST00000464480 OR4E1P0C645 316 aa2.33□□□□□ -2.04
HMGXB4-205ENST00000464480 COX4I1P13073 169 aa2.33□□□□□ -2.04
HMGXB4-205ENST00000464480 CCNOP22674 350 aa2.33□□□□□ -2.04
HMGXB4-205ENST00000464480 CD40LGP29965 261 aa2.33□□□□□ -2.04
HMGXB4-205ENST00000464480 RCVRNP35243 200 aa2.33□□□□□ -2.04
HMGXB4-205ENST00000464480 MAGEA2P43356 314 aa2.33□□□□□ -2.04
HMGXB4-205ENST00000464480 KIR3DL2P43630 455 aa2.33□□□□□ -2.04
HMGXB4-205ENST00000464480 SLCO1A2P46721 670 aa2.33□□□□□ -2.04
HMGXB4-205ENST00000464480 RPS15P62841 145 aaKnown RBP2.33□□□□□ -2.04
HMGXB4-205ENST00000464480 GNGT1P63211 74 aa2.33□□□□□ -2.04
HMGXB4-205ENST00000464480 REEP5Q00765 189 aa2.33□□□□□ -2.04
HMGXB4-205ENST00000464480 FLI1Q01543 452 aaPredicted RBP2.33□□□□□ -2.04
HMGXB4-205ENST00000464480 LIPEQ05469 1076 aa2.33□□□□□ -2.04
HMGXB4-205ENST00000464480 ZNF33AQ06730 810 aa2.33□□□□□ -2.04
HMGXB4-205ENST00000464480 CDH17Q12864 832 aa2.33□□□□□ -2.04
HMGXB4-205ENST00000464480 MERTKQ12866 999 aa2.33□□□□□ -2.04
HMGXB4-205ENST00000464480 MADCAM1Q13477 382 aa2.33□□□□□ -2.04
HMGXB4-205ENST00000464480 KRR1Q13601 381 aaKnown RBP2.33□□□□□ -2.04
HMGXB4-205ENST00000464480 GINS1Q14691 196 aa2.33□□□□□ -2.04
HMGXB4-205ENST00000464480 RSPO1Q2MKA7 263 aaPredicted RBP2.33□□□□□ -2.04
HMGXB4-205ENST00000464480 ZNF829Q3KNS6 432 aaPredicted RBP2.33□□□□□ -2.04
HMGXB4-205ENST00000464480 NKAIN1Q4KMZ8 207 aa2.33□□□□□ -2.04
HMGXB4-205ENST00000464480 LIN52Q52LA3 116 aa2.33□□□□□ -2.04
HMGXB4-205ENST00000464480 CLEC6AQ6EIG7 209 aa2.33□□□□□ -2.04
HMGXB4-205ENST00000464480 TEX43Q6ZNM6 134 aa2.33□□□□□ -2.04
HMGXB4-205ENST00000464480 PLEKHG7Q6ZR37 379 aa2.33□□□□□ -2.04
HMGXB4-205ENST00000464480 LINC00523Q86TU6 105 aa2.33□□□□□ -2.04
HMGXB4-205ENST00000464480 NELFCDQ8IXH7 590 aa2.33□□□□□ -2.04
HMGXB4-205ENST00000464480 MICU2Q8IYU8 434 aa2.33□□□□□ -2.04
HMGXB4-205ENST00000464480 CYP4Z2PQ8N1L4 340 aa2.33□□□□□ -2.04
HMGXB4-205ENST00000464480 TRAM1L1Q8N609 369 aa2.33□□□□□ -2.04
HMGXB4-205ENST00000464480 C19orf18Q8NEA5 215 aa2.33□□□□□ -2.04
HMGXB4-205ENST00000464480 OR8J2Q8NGG1 315 aa2.33□□□□□ -2.04
HMGXB4-205ENST00000464480 OR4A4PQ8NGN8 299 aa2.33□□□□□ -2.04
HMGXB4-205ENST00000464480 OR5B3Q8NH48 314 aa2.33□□□□□ -2.04
HMGXB4-205ENST00000464480 UBA3Q8TBC4 463 aa2.33□□□□□ -2.04
HMGXB4-205ENST00000464480 LRRC20Q8TCA0 184 aa2.33□□□□□ -2.04
HMGXB4-205ENST00000464480 DTD1Q8TEA8 209 aa2.33□□□□□ -2.04
HMGXB4-205ENST00000464480 ZFP90Q8TF47 636 aa2.33□□□□□ -2.04
HMGXB4-205ENST00000464480 NAT14Q8WUY8 206 aa2.33□□□□□ -2.04
HMGXB4-205ENST00000464480 DNAJC9Q8WXX5 260 aa2.33□□□□□ -2.04
HMGXB4-205ENST00000464480 TCEAL3Q969E4 200 aa2.33□□□□□ -2.04
HMGXB4-205ENST00000464480 BORCS5Q969J3 196 aa2.33□□□□□ -2.04
HMGXB4-205ENST00000464480 FAM104AQ969W3 186 aa2.33□□□□□ -2.04
HMGXB4-205ENST00000464480 CPNE4Q96A23 557 aaPredicted RBP2.33□□□□□ -2.04
HMGXB4-205ENST00000464480 NTAN1Q96AB6 310 aa2.33□□□□□ -2.04
HMGXB4-205ENST00000464480 ISG20Q96AZ6 181 aaKnown RBP2.33□□□□□ -2.04
HMGXB4-205ENST00000464480 S100PBPQ96BU1 408 aa2.33□□□□□ -2.04
HMGXB4-205ENST00000464480 TAMM41Q96BW9 452 aa2.33□□□□□ -2.04
HMGXB4-205ENST00000464480 DGCR14Q96DF8 476 aaKnown RBP2.33□□□□□ -2.04
HMGXB4-205ENST00000464480 TCEAL4Q96EI5 215 aa2.33□□□□□ -2.04
HMGXB4-205ENST00000464480 PDXPQ96GD0 296 aa2.33□□□□□ -2.04
HMGXB4-205ENST00000464480 C9orf72Q96LT7 481 aa2.33□□□□□ -2.04
HMGXB4-205ENST00000464480 FOPNLQ96NB1 174 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms