RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 LUZP4Q9P127 313 aa12.76□□□□□ -0.37
COL5A1-205ENST00000464187 MTFP1Q9UDX5 166 aa12.76□□□□□ -0.37
COL5A1-205ENST00000464187 ZNF222Q9UK12 451 aa12.76□□□□□ -0.37
COL5A1-205ENST00000464187 PRRC2CQ9Y520 2896 aaKnown RBP12.76□□□□□ -0.37
COL5A1-205ENST00000464187 TRAV18A0A075B6X5 111 aa12.76□□□□□ -0.37
COL5A1-205ENST00000464187 LOC390937A0A1W2PQ73 354 aa12.76□□□□□ -0.37
COL5A1-205ENST00000464187 FABP7O15540 132 aa12.76□□□□□ -0.37
COL5A1-205ENST00000464187 SYNGR4O95473 234 aa12.76□□□□□ -0.37
COL5A1-205ENST00000464187 LINC00303Q3SY05 128 aa12.76□□□□□ -0.37
COL5A1-205ENST00000464187 LAMTOR1Q6IAA8 161 aa12.76□□□□□ -0.37
COL5A1-205ENST00000464187 CDH24Q86UP0 819 aa12.76□□□□□ -0.37
COL5A1-205ENST00000464187 LYPD6Q86Y78 171 aa12.76□□□□□ -0.37
COL5A1-205ENST00000464187 ELMOD2Q8IZ81 293 aa12.76□□□□□ -0.37
COL5A1-205ENST00000464187 DACT3Q96B18 629 aaPredicted RBP12.76□□□□□ -0.37
COL5A1-205ENST00000464187 PBOV1Q9GZY1 135 aa12.76□□□□□ -0.37
COL5A1-205ENST00000464187 OR10A4Q9H209 315 aa12.76□□□□□ -0.37
COL5A1-205ENST00000464187 PLSCR2Q9NRY7 297 aa12.76□□□□□ -0.37
COL5A1-205ENST00000464187 POLR1DQ9Y2S0 133 aa12.76□□□□□ -0.37
COL5A1-205ENST00000464187 RHBDD3Q9Y3P4 386 aa12.76□□□□□ -0.37
COL5A1-205ENST00000464187 MEGF11A6BM72 1044 aa12.75□□□□□ -0.37
COL5A1-205ENST00000464187 ZNF878C9JN71 531 aa12.75□□□□□ -0.37
COL5A1-205ENST00000464187 AQP7O14520 342 aa12.75□□□□□ -0.37
COL5A1-205ENST00000464187 ARPC1BO15143 372 aaKnown RBP12.75□□□□□ -0.37
COL5A1-205ENST00000464187 HPXP02790 462 aa12.75□□□□□ -0.37
COL5A1-205ENST00000464187 QDPRP09417 244 aa12.75□□□□□ -0.37
COL5A1-205ENST00000464187 SULT1A3P0DMM9 295 aa12.75□□□□□ -0.37
COL5A1-205ENST00000464187 SULT1A4P0DMN0 295 aa12.75□□□□□ -0.37
COL5A1-205ENST00000464187 NTF4P34130 210 aa12.75□□□□□ -0.37
COL5A1-205ENST00000464187 PCGF3Q3KNV8 242 aa12.75□□□□□ -0.37
COL5A1-205ENST00000464187 C1orf100Q5SVJ3 147 aa12.75□□□□□ -0.37
COL5A1-205ENST00000464187 ADGRE4PQ86SQ3 457 aa12.75□□□□□ -0.37
COL5A1-205ENST00000464187 TMEM123Q8N131 208 aa12.75□□□□□ -0.37
COL5A1-205ENST00000464187 PRRG4Q9BZD6 226 aa12.75□□□□□ -0.37
COL5A1-205ENST00000464187 PRDM14Q9GZV8 571 aa12.75□□□□□ -0.37
COL5A1-205ENST00000464187 ATG5Q9H1Y0 275 aa12.75□□□□□ -0.37
COL5A1-205ENST00000464187 ZNF71Q9NQZ8 489 aaPredicted RBP12.75□□□□□ -0.37
COL5A1-205ENST00000464187 GLTPQ9NZD2 209 aa12.75□□□□□ -0.37
COL5A1-205ENST00000464187 EMC3Q9P0I2 261 aa12.75□□□□□ -0.37
COL5A1-205ENST00000464187 A0A1B0GUH1 482 aa12.74□□□□□ -0.37
COL5A1-205ENST00000464187 LDLRAD4O15165 306 aa12.74□□□□□ -0.37
COL5A1-205ENST00000464187 ZZEF1O43149 2961 aa12.74□□□□□ -0.37
COL5A1-205ENST00000464187 PRAF2O60831 178 aa12.74□□□□□ -0.37
COL5A1-205ENST00000464187 RBBP9O75884 186 aa12.74□□□□□ -0.37
COL5A1-205ENST00000464187 FAM87AP0C7U9 286 aa12.74□□□□□ -0.37
COL5A1-205ENST00000464187 ANXA3P12429 323 aa12.74□□□□□ -0.37
COL5A1-205ENST00000464187 NR2C1P13056 603 aa12.74□□□□□ -0.37
COL5A1-205ENST00000464187 GABRA1P14867 456 aa12.74□□□□□ -0.37
COL5A1-205ENST00000464187 CSNK1A1P48729 337 aa12.74□□□□□ -0.37
COL5A1-205ENST00000464187 PSMA6P60900 246 aaKnown RBP12.74□□□□□ -0.37
COL5A1-205ENST00000464187 KCNMB1Q16558 191 aa12.74□□□□□ -0.37
COL5A1-205ENST00000464187 PIAS4Q8N2W9 510 aaPredicted RBP12.74□□□□□ -0.37
COL5A1-205ENST00000464187 JAGN1Q8N5M9 183 aa12.74□□□□□ -0.37
COL5A1-205ENST00000464187 NKAIN3Q8N8D7 197 aa12.74□□□□□ -0.37
COL5A1-205ENST00000464187 OR6N1Q8NGY5 312 aa12.74□□□□□ -0.37
COL5A1-205ENST00000464187 OR2AJ1Q8NGZ0 328 aa12.74□□□□□ -0.37
COL5A1-205ENST00000464187 ZCCHC14Q8WYQ9 949 aaKnown RBP12.74□□□□□ -0.37
COL5A1-205ENST00000464187 FGGYQ96C11 551 aa12.74□□□□□ -0.37
COL5A1-205ENST00000464187 PNRC2Q9NPJ4 139 aaKnown RBP12.74□□□□□ -0.37
COL5A1-205ENST00000464187 CHD8Q9HCK8 2581 aa12.74□□□□□ -0.37
COL5A1-205ENST00000464187 IGKV3D-15A0A087WSY6 115 aa12.74□□□□□ -0.37
COL5A1-205ENST00000464187 MEIKINA0A087WXM9 373 aa12.74□□□□□ -0.37
COL5A1-205ENST00000464187 MEIS3P1A6NDR6 274 aa12.74□□□□□ -0.37
COL5A1-205ENST00000464187 ZNHIT1O43257 154 aa12.74□□□□□ -0.37
COL5A1-205ENST00000464187 AKR7A2O43488 359 aa12.74□□□□□ -0.37
COL5A1-205ENST00000464187 TGM6O95932 706 aa12.74□□□□□ -0.37
COL5A1-205ENST00000464187 ZP1P60852 638 aa12.74□□□□□ -0.37
COL5A1-205ENST00000464187 PHYHD1Q5SRE7 291 aa12.74□□□□□ -0.37
COL5A1-205ENST00000464187 AAED1Q7RTV5 226 aa12.74□□□□□ -0.37
COL5A1-205ENST00000464187 OR4D6Q8NGJ1 314 aa12.74□□□□□ -0.37
COL5A1-205ENST00000464187 OR4C16Q8NGL9 310 aa12.74□□□□□ -0.37
COL5A1-205ENST00000464187 OR1J2Q8NGS2 313 aa12.74□□□□□ -0.37
COL5A1-205ENST00000464187 TMEM54Q969K7 222 aa12.74□□□□□ -0.37
COL5A1-205ENST00000464187 PNPLA2Q96AD5 504 aa12.74□□□□□ -0.37
COL5A1-205ENST00000464187 ADAT3Q96EY9 351 aaPredicted RBP12.74□□□□□ -0.37
COL5A1-205ENST00000464187 HYLS1Q96M11 299 aa12.74□□□□□ -0.37
COL5A1-205ENST00000464187 MOB1AQ9H8S9 216 aa12.74□□□□□ -0.37
COL5A1-205ENST00000464187 NOX3Q9HBY0 568 aa12.74□□□□□ -0.37
COL5A1-205ENST00000464187 ASH2LQ9UBL3 628 aa12.74□□□□□ -0.37
COL5A1-205ENST00000464187 FOXD3Q9UJU5 478 aaPredicted RBP12.74□□□□□ -0.37
COL5A1-205ENST00000464187 A0A1B0GTI1 187 aa12.73□□□□□ -0.37
COL5A1-205ENST00000464187 MED19A0JLT2 244 aaPredicted RBP12.73□□□□□ -0.37
COL5A1-205ENST00000464187 SYT7O43581 403 aa12.73□□□□□ -0.37
COL5A1-205ENST00000464187 SSNA1O43805 119 aa12.73□□□□□ -0.37
COL5A1-205ENST00000464187 NDUFB6O95139 128 aa12.73□□□□□ -0.37
COL5A1-205ENST00000464187 CRYABP02511 175 aaKnown RBP12.73□□□□□ -0.37
COL5A1-205ENST00000464187 CSF1P09603 554 aa12.73□□□□□ -0.37
COL5A1-205ENST00000464187 HSD11B1P28845 292 aa12.73□□□□□ -0.37
COL5A1-205ENST00000464187 PRSS3P35030 304 aa12.73□□□□□ -0.37
COL5A1-205ENST00000464187 RAD52P43351 418 aa12.73□□□□□ -0.37
COL5A1-205ENST00000464187 SNRPD2P62316 118 aaKnown RBP12.73□□□□□ -0.37
COL5A1-205ENST00000464187 SEZ6L2Q6UXD5 910 aa12.73□□□□□ -0.37
COL5A1-205ENST00000464187 ZNF813Q6ZN06 617 aa12.73□□□□□ -0.37
COL5A1-205ENST00000464187 Q6ZTK2 550 aa12.73□□□□□ -0.37
COL5A1-205ENST00000464187 TUSC5Q8IXB3 177 aa12.73□□□□□ -0.37
COL5A1-205ENST00000464187 C9orf62Q8N4C0 152 aa12.73□□□□□ -0.37
COL5A1-205ENST00000464187 DEDD2Q8WXF8 326 aa12.73□□□□□ -0.37
COL5A1-205ENST00000464187 SARAFQ96BY9 339 aa12.73□□□□□ -0.37
COL5A1-205ENST00000464187 INTS12Q96CB8 462 aaKnown RBP12.73□□□□□ -0.37
COL5A1-205ENST00000464187 GON7Q9BXV9 100 aa12.73□□□□□ -0.37
COL5A1-205ENST00000464187 TMEM165Q9HC07 324 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms