RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 PSKH1P11801 424 aa11.96□□□□□ -0.49
SNRNP40-203ENST00000463988 SPI1P17947 270 aa11.96□□□□□ -0.49
SNRNP40-203ENST00000463988 DDOSTP39656 456 aa11.96□□□□□ -0.49
SNRNP40-203ENST00000463988 SLC15A1P46059 708 aa11.96□□□□□ -0.49
SNRNP40-203ENST00000463988 CRMP1Q14194 572 aa11.96□□□□□ -0.49
SNRNP40-203ENST00000463988 TRIM25Q14258 630 aaKnown RBP11.96□□□□□ -0.49
SNRNP40-203ENST00000463988 GK3PQ14409 553 aa11.96□□□□□ -0.49
SNRNP40-203ENST00000463988 TAF13Q15543 124 aa11.96□□□□□ -0.49
SNRNP40-203ENST00000463988 SLC9A3R2Q15599 337 aa11.96□□□□□ -0.49
SNRNP40-203ENST00000463988 C11orf91Q3C1V1 193 aa11.96□□□□□ -0.49
SNRNP40-203ENST00000463988 OR2T5Q6IEZ7 315 aa11.96□□□□□ -0.49
SNRNP40-203ENST00000463988 LYPD4Q6UWN0 246 aa11.96□□□□□ -0.49
SNRNP40-203ENST00000463988 LYPD2Q6UXB3 125 aa11.96□□□□□ -0.49
SNRNP40-203ENST00000463988 CD300LDQ6UXZ3 194 aa11.96□□□□□ -0.49
SNRNP40-203ENST00000463988 DHFR2Q86XF0 187 aa11.96□□□□□ -0.49
SNRNP40-203ENST00000463988 ZNF511Q8NB15 262 aa11.96□□□□□ -0.49
SNRNP40-203ENST00000463988 OR9Q1Q8NGQ5 310 aa11.96□□□□□ -0.49
SNRNP40-203ENST00000463988 OR2T29Q8NH02 315 aa11.96□□□□□ -0.49
SNRNP40-203ENST00000463988 OR4Q3Q8NH05 313 aa11.96□□□□□ -0.49
SNRNP40-203ENST00000463988 OR2AE1Q8NHA4 323 aa11.96□□□□□ -0.49
SNRNP40-203ENST00000463988 SPSB4Q96A44 273 aa11.96□□□□□ -0.49
SNRNP40-203ENST00000463988 REEP1Q9H902 201 aa11.96□□□□□ -0.49
SNRNP40-203ENST00000463988 SP140LQ9H930 580 aa11.96□□□□□ -0.49
SNRNP40-203ENST00000463988 MEGF8Q7Z7M0 2845 aa11.96□□□□□ -0.5
SNRNP40-203ENST00000463988 TRAV38-1A0A0B4J264 116 aa11.95□□□□□ -0.5
SNRNP40-203ENST00000463988 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.95□□□□□ -0.5
SNRNP40-203ENST00000463988 RIIAD1A6NNX1 92 aa11.95□□□□□ -0.5
SNRNP40-203ENST00000463988 TNFRSF13BO14836 293 aaPredicted RBP11.95□□□□□ -0.5
SNRNP40-203ENST00000463988 APOC1P02654 83 aa11.95□□□□□ -0.5
SNRNP40-203ENST00000463988 LIPFP07098 398 aa11.95□□□□□ -0.5
SNRNP40-203ENST00000463988 PRKXP51817 358 aa11.95□□□□□ -0.5
SNRNP40-203ENST00000463988 GYS2P54840 703 aa11.95□□□□□ -0.5
SNRNP40-203ENST00000463988 GRB2P62993 217 aaKnown RBP11.95□□□□□ -0.5
SNRNP40-203ENST00000463988 IL13RA1P78552 427 aa11.95□□□□□ -0.5
SNRNP40-203ENST00000463988 FAM98BQ52LJ0 330 aaKnown RBP11.95□□□□□ -0.5
SNRNP40-203ENST00000463988 RHOUQ7L0Q8 258 aa11.95□□□□□ -0.5
SNRNP40-203ENST00000463988 OR56B2PQ8NGI1 322 aa11.95□□□□□ -0.5
SNRNP40-203ENST00000463988 NSL1Q96IY1 281 aa11.95□□□□□ -0.5
SNRNP40-203ENST00000463988 DUX5Q96PT3 197 aa11.95□□□□□ -0.5
SNRNP40-203ENST00000463988 TOR3AQ9H497 397 aa11.95□□□□□ -0.5
SNRNP40-203ENST00000463988 CMC2Q9NRP2 79 aa11.95□□□□□ -0.5
SNRNP40-203ENST00000463988 CENPMQ9NSP4 180 aa11.95□□□□□ -0.5
SNRNP40-203ENST00000463988 C14orf119Q9NWQ9 140 aa11.95□□□□□ -0.5
SNRNP40-203ENST00000463988 ERVK-18Q9QC07 812 aa11.95□□□□□ -0.5
SNRNP40-203ENST00000463988 SAMHD1Q9Y3Z3 626 aaKnown RBP11.95□□□□□ -0.5
SNRNP40-203ENST00000463988 PCDHGB1Q9Y5G3 927 aa11.95□□□□□ -0.5
SNRNP40-203ENST00000463988 IGHV3OR16-10A0A075B7F0 116 aa11.94□□□□□ -0.5
SNRNP40-203ENST00000463988 TRAV40A0A0B4J280 105 aa11.94□□□□□ -0.5
SNRNP40-203ENST00000463988 DHRS12A0PJE2 317 aa11.94□□□□□ -0.5
SNRNP40-203ENST00000463988 C5orf63A6NC05 138 aa11.94□□□□□ -0.5
SNRNP40-203ENST00000463988 OOEPA6NGQ2 149 aa11.94□□□□□ -0.5
SNRNP40-203ENST00000463988 POM121CA8CG34 1229 aa11.94□□□□□ -0.5
SNRNP40-203ENST00000463988 C22orf46C9J442 243 aa11.94□□□□□ -0.5
SNRNP40-203ENST00000463988 GYPBP06028 91 aa11.94□□□□□ -0.5
SNRNP40-203ENST00000463988 ZNF3P17036 446 aa11.94□□□□□ -0.5
SNRNP40-203ENST00000463988 ANOS1P23352 680 aa11.94□□□□□ -0.5
SNRNP40-203ENST00000463988 FGF12P61328 243 aa11.94□□□□□ -0.5
SNRNP40-203ENST00000463988 PRR31Q5SQ13 230 aa11.94□□□□□ -0.5
SNRNP40-203ENST00000463988 LINC01590Q5TEZ4 76 aa11.94□□□□□ -0.5
SNRNP40-203ENST00000463988 GPR157Q5UAW9 335 aa11.94□□□□□ -0.5
SNRNP40-203ENST00000463988 C19orf18Q8NEA5 215 aa11.94□□□□□ -0.5
SNRNP40-203ENST00000463988 OR6K6Q8NGW6 343 aa11.94□□□□□ -0.5
SNRNP40-203ENST00000463988 MMADHCQ9H3L0 296 aaPredicted RBP11.94□□□□□ -0.5
SNRNP40-203ENST00000463988 NOX4Q9NPH5 578 aa11.94□□□□□ -0.5
SNRNP40-203ENST00000463988 ARMC1Q9NVT9 282 aa11.94□□□□□ -0.5
SNRNP40-203ENST00000463988 C1orf123Q9NWV4 160 aa11.94□□□□□ -0.5
SNRNP40-203ENST00000463988 VNN3Q9NY84 501 aa11.94□□□□□ -0.5
SNRNP40-203ENST00000463988 U3KQV3 271 aa11.94□□□□□ -0.5
SNRNP40-203ENST00000463988 ARRDC5A6NEK1 342 aa11.93□□□□□ -0.5
SNRNP40-203ENST00000463988 ANKRD30BLA7E2S9 258 aa11.93□□□□□ -0.5
SNRNP40-203ENST00000463988 ZNF879B4DU55 563 aa11.93□□□□□ -0.5
SNRNP40-203ENST00000463988 P2RY10O00398 339 aa11.93□□□□□ -0.5
SNRNP40-203ENST00000463988 TMPRSS2O15393 492 aa11.93□□□□□ -0.5
SNRNP40-203ENST00000463988 SOX14O95416 240 aa11.93□□□□□ -0.5
SNRNP40-203ENST00000463988 LHBP01229 141 aa11.93□□□□□ -0.5
SNRNP40-203ENST00000463988 RAP2AP10114 183 aa11.93□□□□□ -0.5
SNRNP40-203ENST00000463988 SLC2A1P11166 492 aa11.93□□□□□ -0.5
SNRNP40-203ENST00000463988 CFL1P23528 166 aaKnown RBP11.93□□□□□ -0.5
SNRNP40-203ENST00000463988 GRK5P34947 590 aa11.93□□□□□ -0.5
SNRNP40-203ENST00000463988 MS4A2Q01362 244 aa11.93□□□□□ -0.5
SNRNP40-203ENST00000463988 PPP1R8Q12972 351 aaKnown RBP11.93□□□□□ -0.5
SNRNP40-203ENST00000463988 OR8B8Q15620 311 aa11.93□□□□□ -0.5
SNRNP40-203ENST00000463988 SFRP4Q6FHJ7 346 aaPredicted RBP11.93□□□□□ -0.5
SNRNP40-203ENST00000463988 C16orf87Q6PH81 154 aa11.93□□□□□ -0.5
SNRNP40-203ENST00000463988 RNF133Q8WVZ7 376 aa11.93□□□□□ -0.5
SNRNP40-203ENST00000463988 TECTBQ96PL2 329 aa11.93□□□□□ -0.5
SNRNP40-203ENST00000463988 ZNF696Q9H7X3 374 aa11.93□□□□□ -0.5
SNRNP40-203ENST00000463988 MARCH7Q9H992 704 aa11.93□□□□□ -0.5
SNRNP40-203ENST00000463988 RNPEPL1Q9HAU8 725 aa11.93□□□□□ -0.5
SNRNP40-203ENST00000463988 KIF17Q9P2E2 1029 aa11.93□□□□□ -0.5
SNRNP40-203ENST00000463988 KAAG1Q9UBP8 84 aa11.93□□□□□ -0.5
SNRNP40-203ENST00000463988 CTSZQ9UBR2 303 aa11.93□□□□□ -0.5
SNRNP40-203ENST00000463988 PRPF19Q9UMS4 504 aaKnown RBP11.93□□□□□ -0.5
SNRNP40-203ENST00000463988 C3orf80F5H4A9 247 aa11.92□□□□□ -0.5
SNRNP40-203ENST00000463988 ADAM20O43506 726 aa11.92□□□□□ -0.5
SNRNP40-203ENST00000463988 ECDO95905 644 aaPredicted RBP11.92□□□□□ -0.5
SNRNP40-203ENST00000463988 GRPP07492 148 aa11.92□□□□□ -0.5
SNRNP40-203ENST00000463988 CLUP10909 449 aa11.92□□□□□ -0.5
SNRNP40-203ENST00000463988 HOXB6P17509 224 aaKnown RBP11.92□□□□□ -0.5
SNRNP40-203ENST00000463988 CALB2P22676 271 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms