RNA–Protein interactions for RNA: ENST00000463526.1

CMSS1-202, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 397 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-202ENST00000463526 MRPL22Q9NWU5 206 aaKnown RBP12.67□□□□□ -0.38
CMSS1-202ENST00000463526 ADA2Q9NZK5 511 aa12.67□□□□□ -0.38
CMSS1-202ENST00000463526 NOP16Q9Y3C1 178 aaKnown RBP12.67□□□□□ -0.38
CMSS1-202ENST00000463526 DVL1O14640 695 aa12.66□□□□□ -0.38
CMSS1-202ENST00000463526 ARPC3O15145 178 aa12.66□□□□□ -0.38
CMSS1-202ENST00000463526 OR10H3O60404 316 aa12.66□□□□□ -0.38
CMSS1-202ENST00000463526 GMDSO60547 372 aa12.66□□□□□ -0.38
CMSS1-202ENST00000463526 GADD45GO95257 159 aa12.66□□□□□ -0.38
CMSS1-202ENST00000463526 PRKXP51817 358 aa12.66□□□□□ -0.38
CMSS1-202ENST00000463526 ELF3P78545 371 aaPredicted RBP12.66□□□□□ -0.38
CMSS1-202ENST00000463526 PRB3Q04118 309 aaPredicted RBP12.66□□□□□ -0.38
CMSS1-202ENST00000463526 PDCD1Q15116 288 aa12.66□□□□□ -0.38
CMSS1-202ENST00000463526 OCLNQ16625 522 aa12.66□□□□□ -0.38
CMSS1-202ENST00000463526 GLYATL3Q5SZD4 288 aa12.66□□□□□ -0.38
CMSS1-202ENST00000463526 ASPHD2Q6ICH7 369 aa12.66□□□□□ -0.38
CMSS1-202ENST00000463526 C1QL4Q86Z23 238 aa12.66□□□□□ -0.38
CMSS1-202ENST00000463526 FGFRL1Q8N441 504 aa12.66□□□□□ -0.38
CMSS1-202ENST00000463526 RNF148Q8N7C7 305 aa12.66□□□□□ -0.38
CMSS1-202ENST00000463526 CYB561A3Q8NBI2 242 aa12.66□□□□□ -0.38
CMSS1-202ENST00000463526 LINC01006Q8NI28 216 aa12.66□□□□□ -0.38
CMSS1-202ENST00000463526 ST8SIA4Q92187 359 aa12.66□□□□□ -0.38
CMSS1-202ENST00000463526 DYRK2Q92630 601 aa12.66□□□□□ -0.38
CMSS1-202ENST00000463526 FUZQ9BT04 418 aa12.66□□□□□ -0.38
CMSS1-202ENST00000463526 DCAF13Q9NV06 445 aaKnown RBP12.66□□□□□ -0.38
CMSS1-202ENST00000463526 PRKDCP78527 4128 aaKnown RBP12.65□□□□□ -0.38
CMSS1-202ENST00000463526 A0A0G2JK05 382 aa12.65□□□□□ -0.38
CMSS1-202ENST00000463526 NDUFAB1O14561 156 aa12.65□□□□□ -0.38
CMSS1-202ENST00000463526 NDUFA2O43678 99 aa12.65□□□□□ -0.38
CMSS1-202ENST00000463526 GMNNO75496 209 aa12.65□□□□□ -0.38
CMSS1-202ENST00000463526 FCN3O75636 299 aa12.65□□□□□ -0.38
CMSS1-202ENST00000463526 SLC2A1P11166 492 aa12.65□□□□□ -0.38
CMSS1-202ENST00000463526 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.65□□□□□ -0.382e-7■■■■□ 22.9
CMSS1-202ENST00000463526 TAF9Q16594 264 aa12.65□□□□□ -0.38
CMSS1-202ENST00000463526 LYPD4Q6UWN0 246 aa12.65□□□□□ -0.38
CMSS1-202ENST00000463526 FAM90A1Q86YD7 464 aa12.65□□□□□ -0.38
CMSS1-202ENST00000463526 GCSAMQ8N6F7 178 aa12.65□□□□□ -0.38
CMSS1-202ENST00000463526 PROKR2Q8NFJ6 384 aa12.65□□□□□ -0.38
CMSS1-202ENST00000463526 OR56B2PQ8NGI1 322 aa12.65□□□□□ -0.38
CMSS1-202ENST00000463526 OR51L1Q8NGJ5 315 aa12.65□□□□□ -0.38
CMSS1-202ENST00000463526 DHRS1Q96LJ7 313 aa12.65□□□□□ -0.38
CMSS1-202ENST00000463526 TCF7L1Q9HCS4 588 aa12.65□□□□□ -0.38
CMSS1-202ENST00000463526 CENPMQ9NSP4 180 aa12.65□□□□□ -0.38
CMSS1-202ENST00000463526 DNAJB11Q9UBS4 358 aa12.65□□□□□ -0.38
CMSS1-202ENST00000463526 SAMD4AQ9UPU9 718 aaKnown RBP12.65□□□□□ -0.38
CMSS1-202ENST00000463526 A0A1B0GW55 424 aa12.64□□□□□ -0.39
CMSS1-202ENST00000463526 A0A1W2PRD5 423 aa12.64□□□□□ -0.39
CMSS1-202ENST00000463526 A0A1W2PRF3 423 aa12.64□□□□□ -0.39
CMSS1-202ENST00000463526 A0A1W2PRM7 423 aa12.64□□□□□ -0.39
CMSS1-202ENST00000463526 CCDC22O60826 627 aa12.64□□□□□ -0.39
CMSS1-202ENST00000463526 DUX4L2P0CJ85 424 aa12.64□□□□□ -0.39
CMSS1-202ENST00000463526 DUX4L3P0CJ86 424 aa12.64□□□□□ -0.39
CMSS1-202ENST00000463526 DUX4L4P0CJ87 422 aa12.64□□□□□ -0.39
CMSS1-202ENST00000463526 DUX4L5P0CJ88 424 aa12.64□□□□□ -0.39
CMSS1-202ENST00000463526 DUX4L6P0CJ89 424 aa12.64□□□□□ -0.39
CMSS1-202ENST00000463526 DUX4L7P0CJ90 424 aa12.64□□□□□ -0.39
CMSS1-202ENST00000463526 H2AFXP16104 143 aaPredicted RBP12.64□□□□□ -0.39
CMSS1-202ENST00000463526 IER3P46695 156 aa12.64□□□□□ -0.39
CMSS1-202ENST00000463526 SMIM11AP58511 58 aa12.64□□□□□ -0.39
CMSS1-202ENST00000463526 TAF13Q15543 124 aa12.64□□□□□ -0.39
CMSS1-202ENST00000463526 DUX4L9Q6RFH8 374 aaPredicted RBP12.64□□□□□ -0.39
CMSS1-202ENST00000463526 HACD2Q6Y1H2 254 aa12.64□□□□□ -0.39
CMSS1-202ENST00000463526 VMO1Q7Z5L0 202 aa12.64□□□□□ -0.39
CMSS1-202ENST00000463526 FAM110DQ8TAY7 271 aaPredicted RBP12.64□□□□□ -0.39
CMSS1-202ENST00000463526 ZNRF4Q8WWF5 429 aa12.64□□□□□ -0.39
CMSS1-202ENST00000463526 CCL13Q99616 98 aa12.64□□□□□ -0.39
CMSS1-202ENST00000463526 COPS4Q9BT78 406 aa12.64□□□□□ -0.39
CMSS1-202ENST00000463526 SEMA6AQ9H2E6 1030 aa12.64□□□□□ -0.39
CMSS1-202ENST00000463526 CNTD2Q9H8S5 307 aa12.64□□□□□ -0.39
CMSS1-202ENST00000463526 TRIM36Q9NQ86 728 aa12.64□□□□□ -0.39
CMSS1-202ENST00000463526 MRPL15Q9P015 296 aaKnown RBP12.64□□□□□ -0.39
CMSS1-202ENST00000463526 ONECUT1Q9UBC0 465 aa12.64□□□□□ -0.39
CMSS1-202ENST00000463526 DUX4Q9UBX2 424 aa12.64□□□□□ -0.39
CMSS1-202ENST00000463526 FAM96BQ9Y3D0 163 aa12.64□□□□□ -0.39
CMSS1-202ENST00000463526 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.63□□□□□ -0.39
CMSS1-202ENST00000463526 BHLHE40O14503 412 aa12.63□□□□□ -0.39
CMSS1-202ENST00000463526 PTBP3O95758 552 aaKnown RBP12.63□□□□□ -0.39
CMSS1-202ENST00000463526 TSPAN15O95858 294 aa12.63□□□□□ -0.39
CMSS1-202ENST00000463526 PSKH1P11801 424 aa12.63□□□□□ -0.39
CMSS1-202ENST00000463526 DRAM2Q6UX65 266 aa12.63□□□□□ -0.39
CMSS1-202ENST00000463526 Q6ZSV7 163 aa12.63□□□□□ -0.39
CMSS1-202ENST00000463526 DCXRQ7Z4W1 244 aa12.63□□□□□ -0.39
CMSS1-202ENST00000463526 PIP4P2Q8N4L2 257 aa12.63□□□□□ -0.39
CMSS1-202ENST00000463526 SPERTQ8NA61 448 aa12.63□□□□□ -0.39
CMSS1-202ENST00000463526 PLPP7Q8NBV4 271 aa12.63□□□□□ -0.39
CMSS1-202ENST00000463526 OR8S1Q8NH09 359 aa12.63□□□□□ -0.39
CMSS1-202ENST00000463526 GNPDA2Q8TDQ7 276 aa12.63□□□□□ -0.39
CMSS1-202ENST00000463526 LRRC29Q8WV35 223 aa12.63□□□□□ -0.39
CMSS1-202ENST00000463526 PYURFQ96I23 114 aa12.63□□□□□ -0.39
CMSS1-202ENST00000463526 DPAGT1Q9H3H5 408 aa12.63□□□□□ -0.39
CMSS1-202ENST00000463526 EGLN3Q9H6Z9 239 aa12.63□□□□□ -0.39
CMSS1-202ENST00000463526 C14orf119Q9NWQ9 140 aa12.63□□□□□ -0.39
CMSS1-202ENST00000463526 ABCD2Q9UBJ2 740 aa12.63□□□□□ -0.39
CMSS1-202ENST00000463526 KCNG2Q9UJ96 466 aa12.63□□□□□ -0.39
CMSS1-202ENST00000463526 RPUSD1Q9UJJ7 312 aaKnown RBP12.63□□□□□ -0.39
CMSS1-202ENST00000463526 SLC22A31A6NKX4 558 aa12.62□□□□□ -0.39
CMSS1-202ENST00000463526 TBX1O43435 398 aa12.62□□□□□ -0.39
CMSS1-202ENST00000463526 IDH3BO43837 385 aa12.62□□□□□ -0.39
CMSS1-202ENST00000463526 CLPXO76031 633 aa12.62□□□□□ -0.39
CMSS1-202ENST00000463526 ECDO95905 644 aaPredicted RBP12.62□□□□□ -0.39
CMSS1-202ENST00000463526 SPARCP09486 303 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms