RNA–Protein interactions for RNA: ENST00000463511.1

SSNA1-203, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2

Gene SSNA1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-203ENST00000463511 SIGLEC11Q96RL6 698 aa19.49■□□□□ 0.71
SSNA1-203ENST00000463511 PRRG3Q9BZD7 231 aa19.49■□□□□ 0.71
SSNA1-203ENST00000463511 OR51V1Q9H2C8 321 aa19.49■□□□□ 0.71
SSNA1-203ENST00000463511 RRP15Q9Y3B9 282 aaKnown RBP19.49■□□□□ 0.71
SSNA1-203ENST00000463511 TVP23AA6NH52 213 aa19.48■□□□□ 0.71
SSNA1-203ENST00000463511 A8MXK9 166 aa19.48■□□□□ 0.71
SSNA1-203ENST00000463511 F5H0A9 414 aaPredicted RBP19.48■□□□□ 0.71
SSNA1-203ENST00000463511 SLC2A5P22732 501 aa19.48■□□□□ 0.71
SSNA1-203ENST00000463511 GGT2P36268 569 aa19.48■□□□□ 0.71
SSNA1-203ENST00000463511 ZSCAN2Q7Z7L9 614 aaPredicted RBP19.48■□□□□ 0.71
SSNA1-203ENST00000463511 ZNF511Q8NB15 262 aa19.48■□□□□ 0.71
SSNA1-203ENST00000463511 TMEM163Q8TC26 289 aa19.48■□□□□ 0.71
SSNA1-203ENST00000463511 NRG4Q8WWG1 115 aa19.48■□□□□ 0.71
SSNA1-203ENST00000463511 RDH12Q96NR8 316 aa19.48■□□□□ 0.71
SSNA1-203ENST00000463511 WACQ9BTA9 647 aa19.48■□□□□ 0.71
SSNA1-203ENST00000463511 FAM118AQ9NWS6 357 aa19.48■□□□□ 0.71
SSNA1-203ENST00000463511 SMPD3Q9NY59 655 aaPredicted RBP19.48■□□□□ 0.71
SSNA1-203ENST00000463511 PPP1R3CQ9UQK1 317 aa19.48■□□□□ 0.71
SSNA1-203ENST00000463511 DOK2O60496 412 aa19.47■□□□□ 0.71
SSNA1-203ENST00000463511 GLCEO94923 617 aa19.47■□□□□ 0.71
SSNA1-203ENST00000463511 HLA-DQA2P01906 255 aa19.47■□□□□ 0.71
SSNA1-203ENST00000463511 RNASE1P07998 156 aaKnown RBP19.47■□□□□ 0.71
SSNA1-203ENST00000463511 FMO3P31513 532 aa19.47■□□□□ 0.71
SSNA1-203ENST00000463511 HTR5AP47898 357 aa19.47■□□□□ 0.71
SSNA1-203ENST00000463511 ESCO2Q56NI9 601 aa19.47■□□□□ 0.71
SSNA1-203ENST00000463511 TAF15Q92804 592 aaKnown RBP eCLIP19.47■□□□□ 0.71
SSNA1-203ENST00000463511 UBE2FQ969M7 185 aa19.47■□□□□ 0.71
SSNA1-203ENST00000463511 SLC25A28Q96A46 364 aa19.47■□□□□ 0.71
SSNA1-203ENST00000463511 IL4I1Q96RQ9 567 aa19.47■□□□□ 0.71
SSNA1-203ENST00000463511 PITX2Q99697 317 aa19.47■□□□□ 0.71
SSNA1-203ENST00000463511 MS4A7Q9GZW8 240 aaPredicted RBP19.47■□□□□ 0.71
SSNA1-203ENST00000463511 TBCCD1Q9NVR7 557 aa19.47■□□□□ 0.71
SSNA1-203ENST00000463511 OR5V1Q9UGF6 321 aa19.47■□□□□ 0.71
SSNA1-203ENST00000463511 LHFPL6Q9Y693 200 aa19.47■□□□□ 0.71
SSNA1-203ENST00000463511 IGHV3OR16-10A0A075B7F0 116 aa19.46■□□□□ 0.71
SSNA1-203ENST00000463511 PRODHO43272 600 aa19.46■□□□□ 0.71
SSNA1-203ENST00000463511 KITLGP21583 273 aa19.46■□□□□ 0.71
SSNA1-203ENST00000463511 MDH2P40926 338 aaKnown RBP19.46■□□□□ 0.71
SSNA1-203ENST00000463511 HIST1H3AP68431 136 aa19.46■□□□□ 0.71
SSNA1-203ENST00000463511 AQP6Q13520 282 aa19.46■□□□□ 0.71
SSNA1-203ENST00000463511 HIST2H3PS2Q5TEC6 136 aa19.46■□□□□ 0.71
SSNA1-203ENST00000463511 AADACL4Q5VUY2 407 aa19.46■□□□□ 0.71
SSNA1-203ENST00000463511 TREML4Q6UXN2 200 aa19.46■□□□□ 0.71
SSNA1-203ENST00000463511 HIST2H3AQ71DI3 136 aa19.46■□□□□ 0.71
SSNA1-203ENST00000463511 BCDIN3DQ7Z5W3 292 aaKnown RBP19.46■□□□□ 0.71
SSNA1-203ENST00000463511 OR6K6Q8NGW6 343 aa19.46■□□□□ 0.71
SSNA1-203ENST00000463511 CMBLQ96DG6 245 aa19.46■□□□□ 0.71
SSNA1-203ENST00000463511 OR2V2Q96R30 315 aa19.46■□□□□ 0.71
SSNA1-203ENST00000463511 MARCH7Q9H992 704 aa19.46■□□□□ 0.71
SSNA1-203ENST00000463511 ASH2LQ9UBL3 628 aa19.46■□□□□ 0.71
SSNA1-203ENST00000463511 IL19Q9UHD0 177 aa19.46■□□□□ 0.71
SSNA1-203ENST00000463511 LOC100130705A0A1B0GUX0 176 aa19.45■□□□□ 0.7
SSNA1-203ENST00000463511 SLC16A6O15403 523 aa19.45■□□□□ 0.7
SSNA1-203ENST00000463511 ATP6V1G2O95670 118 aa19.45■□□□□ 0.7
SSNA1-203ENST00000463511 IGHV4-38-2P0DP08 117 aa19.45■□□□□ 0.7
SSNA1-203ENST00000463511 COX5BP10606 129 aa19.45■□□□□ 0.7
SSNA1-203ENST00000463511 BLVRAP53004 296 aa19.45■□□□□ 0.7
SSNA1-203ENST00000463511 APOFQ13790 326 aa19.45■□□□□ 0.7
SSNA1-203ENST00000463511 KLHL12Q53G59 568 aa19.45■□□□□ 0.7
SSNA1-203ENST00000463511 FAM81AQ8TBF8 368 aa19.45■□□□□ 0.7
SSNA1-203ENST00000463511 WDR76Q9H967 626 aa19.45■□□□□ 0.7
SSNA1-203ENST00000463511 STARD10Q9Y365 291 aa19.45■□□□□ 0.7
SSNA1-203ENST00000463511 GMPPBQ9Y5P6 360 aa19.45■□□□□ 0.7
SSNA1-203ENST00000463511 SOX21Q9Y651 276 aaPredicted RBP19.45■□□□□ 0.7
SSNA1-203ENST00000463511 COMMD3-BMI1R4GMX3 469 aa19.45■□□□□ 0.7
SSNA1-203ENST00000463511 CCDC182A6NF36 153 aa19.44■□□□□ 0.7
SSNA1-203ENST00000463511 CEACAM18A8MTB9 384 aa19.44■□□□□ 0.7
SSNA1-203ENST00000463511 SGCEO43556 437 aa19.44■□□□□ 0.7
SSNA1-203ENST00000463511 PSKH1P11801 424 aa19.44■□□□□ 0.7
SSNA1-203ENST00000463511 ZNF823P16415 610 aa19.44■□□□□ 0.7
SSNA1-203ENST00000463511 GSTT1P30711 240 aa19.44■□□□□ 0.7
SSNA1-203ENST00000463511 CD80P33681 288 aa19.44■□□□□ 0.7
SSNA1-203ENST00000463511 MMP16P51512 607 aa19.44■□□□□ 0.7
SSNA1-203ENST00000463511 CDC42P60953 191 aa19.44■□□□□ 0.7
SSNA1-203ENST00000463511 IL13RA1P78552 427 aa19.44■□□□□ 0.7
SSNA1-203ENST00000463511 SCRN3Q0VDG4 424 aa19.44■□□□□ 0.7
SSNA1-203ENST00000463511 SLC9A3R2Q15599 337 aa19.44■□□□□ 0.7
SSNA1-203ENST00000463511 CCDC92Q53HC0 331 aaPredicted RBP19.44■□□□□ 0.7
SSNA1-203ENST00000463511 SLC35D3Q5M8T2 416 aa19.44■□□□□ 0.7
SSNA1-203ENST00000463511 CORO6Q6QEF8 472 aa19.44■□□□□ 0.7
SSNA1-203ENST00000463511 LINC00346Q8IVM7 164 aa19.44■□□□□ 0.7
SSNA1-203ENST00000463511 MUC20Q8N307 709 aaPredicted RBP19.44■□□□□ 0.7
SSNA1-203ENST00000463511 OR8J1Q8NGP2 316 aa19.44■□□□□ 0.7
SSNA1-203ENST00000463511 SLC7A6Q92536 515 aa19.44■□□□□ 0.7
SSNA1-203ENST00000463511 TEAD3Q99594 435 aa19.44■□□□□ 0.7
SSNA1-203ENST00000463511 CYB5R1Q9UHQ9 305 aa19.44■□□□□ 0.7
SSNA1-203ENST00000463511 KCNG2Q9UJ96 466 aa19.44■□□□□ 0.7
SSNA1-203ENST00000463511 LRCH1Q9Y2L9 728 aa19.44■□□□□ 0.7
SSNA1-203ENST00000463511 POLR1DQ9Y2S0 133 aa19.44■□□□□ 0.7
SSNA1-203ENST00000463511 TMEM178BH3BS89 294 aa19.43■□□□□ 0.7
SSNA1-203ENST00000463511 TUBG1P23258 451 aa19.43■□□□□ 0.7
SSNA1-203ENST00000463511 DEFA6Q01524 100 aa19.43■□□□□ 0.7
SSNA1-203ENST00000463511 PAX8Q06710 450 aa19.43■□□□□ 0.7
SSNA1-203ENST00000463511 PCK2Q16822 640 aa19.43■□□□□ 0.7
SSNA1-203ENST00000463511 TEX30Q5JUR7 227 aa19.43■□□□□ 0.7
SSNA1-203ENST00000463511 NXNL2Q5VZ03 156 aa19.43■□□□□ 0.7
SSNA1-203ENST00000463511 SLC18B1Q6NT16 456 aa19.43■□□□□ 0.7
SSNA1-203ENST00000463511 VASH1Q7L8A9 365 aaPredicted RBP19.43■□□□□ 0.7
SSNA1-203ENST00000463511 TIGD4Q8IY51 512 aa19.43■□□□□ 0.7
SSNA1-203ENST00000463511 OR5AS1Q8N127 324 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms