RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 ZBTB8AQ96BR9 441 aa8.73□□□□□ -1.01
PTPRD-207ENST00000463477 DNAJA3Q96EY1 480 aa8.73□□□□□ -1.01
PTPRD-207ENST00000463477 FOXN4Q96NZ1 517 aa8.73□□□□□ -1.01
PTPRD-207ENST00000463477 ANGPTL4Q9BY76 406 aa8.73□□□□□ -1.01
PTPRD-207ENST00000463477 TTTY12Q9BZ98 90 aa8.73□□□□□ -1.01
PTPRD-207ENST00000463477 ALX4Q9H161 411 aaPredicted RBP8.73□□□□□ -1.01
PTPRD-207ENST00000463477 ZDHHC11Q9H8X9 412 aa8.73□□□□□ -1.01
PTPRD-207ENST00000463477 PLSCR2Q9NRY7 297 aa8.73□□□□□ -1.01
PTPRD-207ENST00000463477 FAM206AQ9NX38 181 aa8.73□□□□□ -1.01
PTPRD-207ENST00000463477 B3GNT2Q9NY97 397 aa8.73□□□□□ -1.01
PTPRD-207ENST00000463477 TAS2R4Q9NYW5 299 aa8.73□□□□□ -1.01
PTPRD-207ENST00000463477 FBLN5Q9UBX5 448 aa8.73□□□□□ -1.01
PTPRD-207ENST00000463477 ELF5Q9UKW6 265 aaPredicted RBP8.73□□□□□ -1.01
PTPRD-207ENST00000463477 OSGIN2Q9Y236 505 aa8.73□□□□□ -1.01
PTPRD-207ENST00000463477 ZNF835Q9Y2P0 537 aa8.73□□□□□ -1.01
PTPRD-207ENST00000463477 EMC9Q9Y3B6 208 aa8.73□□□□□ -1.01
PTPRD-207ENST00000463477 USP9YO00507 2555 aaPredicted RBP8.73□□□□□ -1.01
PTPRD-207ENST00000463477 GTF3C1Q12789 2109 aa8.73□□□□□ -1.01
PTPRD-207ENST00000463477 IGKV1D-43A0A0B4J1Z2 117 aa8.72□□□□□ -1.01
PTPRD-207ENST00000463477 A0A0G2JMM0 328 aa8.72□□□□□ -1.01
PTPRD-207ENST00000463477 TMEM269A0A1B0GVZ9 245 aa8.72□□□□□ -1.01
PTPRD-207ENST00000463477 A0A1W2PPB8 328 aa8.72□□□□□ -1.01
PTPRD-207ENST00000463477 A0A1W2PRS3 328 aa8.72□□□□□ -1.01
PTPRD-207ENST00000463477 KIR3DP1A8MWS1 328 aa8.72□□□□□ -1.01
PTPRD-207ENST00000463477 TRAF3IP2O43734 574 aaPredicted RBP8.72□□□□□ -1.01
PTPRD-207ENST00000463477 CREBL2O60519 120 aaPredicted RBP8.72□□□□□ -1.01
PTPRD-207ENST00000463477 OR2A4O95047 310 aa8.72□□□□□ -1.01
PTPRD-207ENST00000463477 MPZL1O95297 269 aa8.72□□□□□ -1.01
PTPRD-207ENST00000463477 IGHG1P01857 330 aa8.72□□□□□ -1.01
PTPRD-207ENST00000463477 PGA4P0DJD7 388 aa8.72□□□□□ -1.01
PTPRD-207ENST00000463477 PGA3P0DJD8 388 aa8.72□□□□□ -1.01
PTPRD-207ENST00000463477 NR2C1P13056 603 aa8.72□□□□□ -1.01
PTPRD-207ENST00000463477 HSD11B1P28845 292 aa8.72□□□□□ -1.01
PTPRD-207ENST00000463477 RFC3P40938 356 aa8.72□□□□□ -1.01
PTPRD-207ENST00000463477 DNASE1L1P49184 302 aa8.72□□□□□ -1.01
PTPRD-207ENST00000463477 EFNB2P52799 333 aa8.72□□□□□ -1.01
PTPRD-207ENST00000463477 BIDP55957 195 aa8.72□□□□□ -1.01
PTPRD-207ENST00000463477 PER3P56645 1201 aa8.72□□□□□ -1.01
PTPRD-207ENST00000463477 RAP2BP61225 183 aa8.72□□□□□ -1.01
PTPRD-207ENST00000463477 PLGLB1Q02325 96 aa8.72□□□□□ -1.01
PTPRD-207ENST00000463477 PLA2G7Q13093 441 aa8.72□□□□□ -1.01
PTPRD-207ENST00000463477 HIST3H3Q16695 136 aa8.72□□□□□ -1.01
PTPRD-207ENST00000463477 ODF4Q2M2E3 257 aa8.72□□□□□ -1.01
PTPRD-207ENST00000463477 PCGF3Q3KNV8 242 aa8.72□□□□□ -1.01
PTPRD-207ENST00000463477 C4orf17Q53FE4 359 aa8.72□□□□□ -1.01
PTPRD-207ENST00000463477 ZBTB37Q5TC79 503 aa8.72□□□□□ -1.01
PTPRD-207ENST00000463477 RAB12Q6IQ22 244 aa8.72□□□□□ -1.01
PTPRD-207ENST00000463477 ZNF529Q6P280 563 aa8.72□□□□□ -1.01
PTPRD-207ENST00000463477 SLC25A47Q6Q0C1 308 aa8.72□□□□□ -1.01
PTPRD-207ENST00000463477 SLC36A1Q7Z2H8 476 aa8.72□□□□□ -1.01
PTPRD-207ENST00000463477 BIVMQ86UB2 503 aa8.72□□□□□ -1.01
PTPRD-207ENST00000463477 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.72□□□□□ -1.01
PTPRD-207ENST00000463477 KDM8Q8N371 416 aa8.72□□□□□ -1.01
PTPRD-207ENST00000463477 TMEM229BQ8NBD8 167 aa8.72□□□□□ -1.01
PTPRD-207ENST00000463477 OR11H4Q8NGC9 324 aa8.72□□□□□ -1.01
PTPRD-207ENST00000463477 OR4C16Q8NGL9 310 aa8.72□□□□□ -1.01
PTPRD-207ENST00000463477 C11orf40Q8WZ69 217 aa8.72□□□□□ -1.01
PTPRD-207ENST00000463477 SNAPC3Q92966 411 aa8.72□□□□□ -1.01
PTPRD-207ENST00000463477 RELTQ969Z4 430 aa8.72□□□□□ -1.01
PTPRD-207ENST00000463477 OXGR1Q96P68 337 aa8.72□□□□□ -1.01
PTPRD-207ENST00000463477 SORCS2Q96PQ0 1159 aa8.72□□□□□ -1.01
PTPRD-207ENST00000463477 OR2A7Q96R45 310 aa8.72□□□□□ -1.01
PTPRD-207ENST00000463477 NUDT16L1Q9BRJ7 211 aaKnown RBP8.72□□□□□ -1.01
PTPRD-207ENST00000463477 TMPRSS13Q9BYE2 586 aa8.72□□□□□ -1.01
PTPRD-207ENST00000463477 OR10A4Q9H209 315 aa8.72□□□□□ -1.01
PTPRD-207ENST00000463477 C1orf198Q9H425 327 aa8.72□□□□□ -1.01
PTPRD-207ENST00000463477 PTGES2Q9H7Z7 377 aa8.72□□□□□ -1.01
PTPRD-207ENST00000463477 MYOZ1Q9NP98 299 aaPredicted RBP8.72□□□□□ -1.01
PTPRD-207ENST00000463477 MED29Q9NX70 200 aa8.72□□□□□ -1.01
PTPRD-207ENST00000463477 MRPL15Q9P015 296 aaKnown RBP8.72□□□□□ -1.01
PTPRD-207ENST00000463477 GTF2A1LQ9UNN4 478 aa8.72□□□□□ -1.01
PTPRD-207ENST00000463477 SLC5A6Q9Y289 635 aa8.72□□□□□ -1.01
PTPRD-207ENST00000463477 RHBDD3Q9Y3P4 386 aa8.72□□□□□ -1.01
PTPRD-207ENST00000463477 HRH3Q9Y5N1 445 aa8.72□□□□□ -1.01
PTPRD-207ENST00000463477 SPTAN1Q13813 2472 aaKnown RBP8.72□□□□□ -1.01
PTPRD-207ENST00000463477 DNAJC13O75165 2243 aa8.72□□□□□ -1.01
PTPRD-207ENST00000463477 DIDO1Q9BTC0 2240 aaKnown RBP8.72□□□□□ -1.01
PTPRD-207ENST00000463477 NCOA6Q14686 2063 aaPredicted RBP8.72□□□□□ -1.01
PTPRD-207ENST00000463477 SPTBN1Q01082 2364 aaKnown RBP8.72□□□□□ -1.01
PTPRD-207ENST00000463477 TRAV18A0A075B6X5 111 aa8.72□□□□□ -1.01
PTPRD-207ENST00000463477 C2orf72A6NCS6 295 aa8.72□□□□□ -1.01
PTPRD-207ENST00000463477 AQP7P3A6NL99 342 aa8.72□□□□□ -1.01
PTPRD-207ENST00000463477 G3V3Q6 166 aa8.72□□□□□ -1.01
PTPRD-207ENST00000463477 G3V3Y1 287 aa8.72□□□□□ -1.01
PTPRD-207ENST00000463477 SCGNO76038 276 aa8.72□□□□□ -1.01
PTPRD-207ENST00000463477 LPLP06858 475 aa8.72□□□□□ -1.01
PTPRD-207ENST00000463477 C4BPBP20851 252 aa8.72□□□□□ -1.01
PTPRD-207ENST00000463477 TAS2R19P59542 299 aa8.72□□□□□ -1.01
PTPRD-207ENST00000463477 SLC10A1Q14973 349 aa8.72□□□□□ -1.01
PTPRD-207ENST00000463477 GLYATL3Q5SZD4 288 aa8.72□□□□□ -1.01
PTPRD-207ENST00000463477 PRAMEF20Q5VT98 475 aa8.72□□□□□ -1.01
PTPRD-207ENST00000463477 KLHL24Q6TFL4 600 aa8.72□□□□□ -1.01
PTPRD-207ENST00000463477 Q6ZTK2 550 aa8.72□□□□□ -1.01
PTPRD-207ENST00000463477 NLRC3Q7RTR2 1065 aa8.72□□□□□ -1.01
PTPRD-207ENST00000463477 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.72□□□□□ -1.01
PTPRD-207ENST00000463477 WDFY1Q8IWB7 410 aa8.72□□□□□ -1.01
PTPRD-207ENST00000463477 TMEM251Q8N6I4 163 aa8.72□□□□□ -1.01
PTPRD-207ENST00000463477 PLPP7Q8NBV4 271 aa8.72□□□□□ -1.01
PTPRD-207ENST00000463477 BEST4Q8NFU0 473 aa8.72□□□□□ -1.01
PTPRD-207ENST00000463477 PPP1R14AQ96A00 147 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms