RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 OCM2P0CE71 109 aa9.21□□□□□ -0.94
RTF1-202ENST00000462276 CCL2P13500 99 aa9.21□□□□□ -0.94
RTF1-202ENST00000462276 GRNP28799 593 aaKnown RBP9.21□□□□□ -0.94
RTF1-202ENST00000462276 TGFBR2P37173 567 aa9.21□□□□□ -0.94
RTF1-202ENST00000462276 CRYBB2P43320 205 aa9.21□□□□□ -0.94
RTF1-202ENST00000462276 RANBP1P43487 201 aa9.21□□□□□ -0.94
RTF1-202ENST00000462276 RPS11P62280 158 aaKnown RBP eCLIP9.21□□□□□ -0.94
RTF1-202ENST00000462276 NKX6-1P78426 367 aaPredicted RBP9.21□□□□□ -0.94
RTF1-202ENST00000462276 HGFACQ04756 655 aa9.21□□□□□ -0.94
RTF1-202ENST00000462276 RIPPLY1Q0D2K3 151 aa9.21□□□□□ -0.94
RTF1-202ENST00000462276 SNAI3Q3KNW1 292 aa9.21□□□□□ -0.94
RTF1-202ENST00000462276 ZNF718Q3SXZ3 478 aa9.21□□□□□ -0.94
RTF1-202ENST00000462276 ACSM3Q53FZ2 586 aa9.21□□□□□ -0.94
RTF1-202ENST00000462276 ALKBH2Q6NS38 261 aa9.21□□□□□ -0.94
RTF1-202ENST00000462276 PGAP1Q75T13 922 aa9.21□□□□□ -0.94
RTF1-202ENST00000462276 MRPL21Q7Z2W9 205 aaKnown RBP9.21□□□□□ -0.94
RTF1-202ENST00000462276 SATL1Q86VE3 508 aa9.21□□□□□ -0.94
RTF1-202ENST00000462276 COMMD2Q86X83 199 aa9.21□□□□□ -0.94
RTF1-202ENST00000462276 PAQR4Q8N4S7 273 aaPredicted RBP9.21□□□□□ -0.94
RTF1-202ENST00000462276 CSNK2A3Q8NEV1 391 aa9.21□□□□□ -0.94
RTF1-202ENST00000462276 LINC01560Q8TB33 94 aa9.21□□□□□ -0.94
RTF1-202ENST00000462276 TMEM203Q969S6 136 aa9.21□□□□□ -0.94
RTF1-202ENST00000462276 TMIGD2Q96BF3 282 aa9.21□□□□□ -0.94
RTF1-202ENST00000462276 HAVCR1Q96D42 359 aa9.21□□□□□ -0.94
RTF1-202ENST00000462276 DGCR14Q96DF8 476 aaKnown RBP9.21□□□□□ -0.94
RTF1-202ENST00000462276 ZC3HAV1LQ96H79 300 aaKnown RBP9.21□□□□□ -0.94
RTF1-202ENST00000462276 REEP6Q96HR9 211 aa9.21□□□□□ -0.94
RTF1-202ENST00000462276 TMED9Q9BVK6 235 aa9.21□□□□□ -0.94
RTF1-202ENST00000462276 ZNF442Q9H7R0 627 aa9.21□□□□□ -0.94
RTF1-202ENST00000462276 NEK6Q9HC98 313 aa9.21□□□□□ -0.94
RTF1-202ENST00000462276 ZNF275Q9NSD4 429 aaPredicted RBP9.21□□□□□ -0.94
RTF1-202ENST00000462276 ZNF319Q9P2F9 582 aa9.21□□□□□ -0.94
RTF1-202ENST00000462276 KCNN3Q9UGI6 736 aa9.21□□□□□ -0.94
RTF1-202ENST00000462276 DHDHQ9UQ10 334 aa9.21□□□□□ -0.94
RTF1-202ENST00000462276 NOP16Q9Y3C1 178 aaKnown RBP9.21□□□□□ -0.94
RTF1-202ENST00000462276 N6AMT1Q9Y5N5 214 aa9.21□□□□□ -0.94
RTF1-202ENST00000462276 RTTNQ86VV8 2226 aa9.21□□□□□ -0.94
RTF1-202ENST00000462276 FLNCQ14315 2725 aa9.21□□□□□ -0.94
RTF1-202ENST00000462276 PNMA8CA0A1B0GUJ8 204 aa9.2□□□□□ -0.94
RTF1-202ENST00000462276 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.2□□□□□ -0.94
RTF1-202ENST00000462276 MEGF11A6BM72 1044 aa9.2□□□□□ -0.94
RTF1-202ENST00000462276 P2RY10O00398 339 aa9.2□□□□□ -0.94
RTF1-202ENST00000462276 ABCD4O14678 606 aa9.2□□□□□ -0.94
RTF1-202ENST00000462276 GPX5O75715 221 aa9.2□□□□□ -0.94
RTF1-202ENST00000462276 ALX3O95076 343 aa9.2□□□□□ -0.94
RTF1-202ENST00000462276 GABARAPO95166 117 aa9.2□□□□□ -0.94
RTF1-202ENST00000462276 NGFP01138 241 aa9.2□□□□□ -0.94
RTF1-202ENST00000462276 GCH1P30793 250 aa9.2□□□□□ -0.94
RTF1-202ENST00000462276 PSMD7P51665 324 aa9.2□□□□□ -0.94
RTF1-202ENST00000462276 BSPH1Q075Z2 132 aa9.2□□□□□ -0.94
RTF1-202ENST00000462276 DOC2BQ14184 412 aa9.2□□□□□ -0.94
RTF1-202ENST00000462276 GK2Q14410 553 aaPredicted RBP9.2□□□□□ -0.94
RTF1-202ENST00000462276 OR8B8Q15620 311 aa9.2□□□□□ -0.94
RTF1-202ENST00000462276 ZMAT1Q5H9K5 638 aa9.2□□□□□ -0.94
RTF1-202ENST00000462276 GLYATL3Q5SZD4 288 aa9.2□□□□□ -0.94
RTF1-202ENST00000462276 GPR107Q5VW38 600 aa9.2□□□□□ -0.94
RTF1-202ENST00000462276 MBNL2Q5VZF2 373 aaKnown RBP9.2□□□□□ -0.94
RTF1-202ENST00000462276 SLC22A25Q6T423 547 aa9.2□□□□□ -0.94
RTF1-202ENST00000462276 RFPL4BQ6ZWI9 263 aa9.2□□□□□ -0.94
RTF1-202ENST00000462276 CEACAM19Q7Z692 300 aa9.2□□□□□ -0.94
RTF1-202ENST00000462276 MYPOPQ86VE0 399 aaPredicted RBP9.2□□□□□ -0.94
RTF1-202ENST00000462276 SERPINA12Q8IW75 414 aa9.2□□□□□ -0.94
RTF1-202ENST00000462276 ZNF101Q8IZC7 436 aa9.2□□□□□ -0.94
RTF1-202ENST00000462276 RDH10Q8IZV5 341 aa9.2□□□□□ -0.94
RTF1-202ENST00000462276 PARP16Q8N5Y8 322 aa9.2□□□□□ -0.94
RTF1-202ENST00000462276 SEMA6DQ8NFY4 1073 aa9.2□□□□□ -0.94
RTF1-202ENST00000462276 OR5D14Q8NGL3 314 aa9.2□□□□□ -0.94
RTF1-202ENST00000462276 OR1J1Q8NGS3 322 aa9.2□□□□□ -0.94
RTF1-202ENST00000462276 PP6455Q8WZ26 134 aa9.2□□□□□ -0.94
RTF1-202ENST00000462276 PPP1R14AQ96A00 147 aa9.2□□□□□ -0.94
RTF1-202ENST00000462276 PLPPR2Q96GM1 343 aa9.2□□□□□ -0.94
RTF1-202ENST00000462276 MARS2Q96GW9 593 aaKnown RBP9.2□□□□□ -0.94
RTF1-202ENST00000462276 KCTD7Q96MP8 289 aa9.2□□□□□ -0.94
RTF1-202ENST00000462276 TECTBQ96PL2 329 aa9.2□□□□□ -0.94
RTF1-202ENST00000462276 SLC22A4Q9H015 551 aa9.2□□□□□ -0.94
RTF1-202ENST00000462276 SLITRK2Q9H156 845 aa9.2□□□□□ -0.94
RTF1-202ENST00000462276 ABCB9Q9NP78 766 aa9.2□□□□□ -0.94
RTF1-202ENST00000462276 CRIM1Q9NZV1 1036 aa9.2□□□□□ -0.94
RTF1-202ENST00000462276 CKLFQ9UBR5 152 aa9.2□□□□□ -0.94
RTF1-202ENST00000462276 GPR160Q9UJ42 338 aa9.2□□□□□ -0.94
RTF1-202ENST00000462276 ENPP5Q9UJA9 477 aa9.2□□□□□ -0.94
RTF1-202ENST00000462276 FBXO9Q9UK97 447 aaPredicted RBP9.2□□□□□ -0.94
RTF1-202ENST00000462276 RNF115Q9Y4L5 304 aa9.2□□□□□ -0.94
RTF1-202ENST00000462276 V9GYS6 101 aa9.2□□□□□ -0.94
RTF1-202ENST00000462276 RELNP78509 3460 aa9.2□□□□□ -0.94
RTF1-202ENST00000462276 COL12A1Q99715 3063 aa9.19□□□□□ -0.94
RTF1-202ENST00000462276 TRBV5-7A0A0A0MS05 114 aa9.19□□□□□ -0.94
RTF1-202ENST00000462276 TRAV1-2A0A0B4J238 106 aa9.19□□□□□ -0.94
RTF1-202ENST00000462276 hCG_38984A0A1B0GV85 526 aa9.19□□□□□ -0.94
RTF1-202ENST00000462276 DPPA5A6NC42 116 aa9.19□□□□□ -0.94
RTF1-202ENST00000462276 GGT3PA6NGU5 568 aa9.19□□□□□ -0.94
RTF1-202ENST00000462276 A6NHS1 94 aa9.19□□□□□ -0.94
RTF1-202ENST00000462276 CD300LBA8K4G0 201 aa9.19□□□□□ -0.94
RTF1-202ENST00000462276 GABRPO00591 440 aa9.19□□□□□ -0.94
RTF1-202ENST00000462276 SLC22A1O15245 554 aa9.19□□□□□ -0.94
RTF1-202ENST00000462276 TMEM127O75204 238 aa9.19□□□□□ -0.94
RTF1-202ENST00000462276 UCHL1P09936 223 aa9.19□□□□□ -0.94
RTF1-202ENST00000462276 ZNF250P15622 560 aa9.19□□□□□ -0.94
RTF1-202ENST00000462276 GADD45AP24522 165 aa9.19□□□□□ -0.94
RTF1-202ENST00000462276 CALCRP30988 508 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms