RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 DCDC5Q6ZRR9 648 aa7.46□□□□□ -1.22
LDB1-203ENST00000461873 SPATC1Q76KD6 591 aa7.46□□□□□ -1.22
LDB1-203ENST00000461873 KLBQ86Z14 1044 aa7.46□□□□□ -1.22
LDB1-203ENST00000461873 ERI1Q8IV48 349 aaKnown RBP7.46□□□□□ -1.22
LDB1-203ENST00000461873 DEFB108BQ8NET1 73 aa7.46□□□□□ -1.22
LDB1-203ENST00000461873 OR6N2Q8NGY6 317 aa7.46□□□□□ -1.22
LDB1-203ENST00000461873 SLC25A28Q96A46 364 aa7.46□□□□□ -1.22
LDB1-203ENST00000461873 SLAMF6Q96DU3 332 aa7.46□□□□□ -1.22
LDB1-203ENST00000461873 INTS14Q96SY0 518 aa7.46□□□□□ -1.22
LDB1-203ENST00000461873 OR10A2Q9H208 303 aa7.46□□□□□ -1.22
LDB1-203ENST00000461873 ZMAT3Q9HA38 289 aaKnown RBP7.46□□□□□ -1.22
LDB1-203ENST00000461873 ARMC1Q9NVT9 282 aa7.46□□□□□ -1.22
LDB1-203ENST00000461873 MRPL15Q9P015 296 aaKnown RBP7.46□□□□□ -1.22
LDB1-203ENST00000461873 RNF7Q9UBF6 113 aa7.46□□□□□ -1.22
LDB1-203ENST00000461873 DOCK11Q5JSL3 2073 aa7.46□□□□□ -1.22
LDB1-203ENST00000461873 TCRBV5S2A0A599 114 aa7.45□□□□□ -1.22
LDB1-203ENST00000461873 ANXA2P2A6NMY6 339 aa7.45□□□□□ -1.22
LDB1-203ENST00000461873 CD300LBA8K4G0 201 aa7.45□□□□□ -1.22
LDB1-203ENST00000461873 PRR23D1E9PI22 279 aaPredicted RBP7.45□□□□□ -1.22
LDB1-203ENST00000461873 HMGN1P05114 100 aa7.45□□□□□ -1.22
LDB1-203ENST00000461873 CRYBA1P05813 215 aa7.45□□□□□ -1.22
LDB1-203ENST00000461873 GYPBP06028 91 aa7.45□□□□□ -1.22
LDB1-203ENST00000461873 WNT2P09544 360 aa7.45□□□□□ -1.22
LDB1-203ENST00000461873 PRR23D2P0DMB1 279 aaPredicted RBP7.45□□□□□ -1.22
LDB1-203ENST00000461873 ZNF12P17014 697 aa7.45□□□□□ -1.22
LDB1-203ENST00000461873 SPI1P17947 270 aa7.45□□□□□ -1.22
LDB1-203ENST00000461873 ZFP36P26651 326 aaKnown RBP7.45□□□□□ -1.22
LDB1-203ENST00000461873 GSTT1P30711 240 aa7.45□□□□□ -1.22
LDB1-203ENST00000461873 CD200P41217 278 aa7.45□□□□□ -1.22
LDB1-203ENST00000461873 RPS27P42677 84 aaKnown RBP7.45□□□□□ -1.22
LDB1-203ENST00000461873 CX3CR1P49238 355 aa7.45□□□□□ -1.22
LDB1-203ENST00000461873 SLC25A1P53007 311 aa7.45□□□□□ -1.22
LDB1-203ENST00000461873 FOXL1Q12952 345 aa7.45□□□□□ -1.22
LDB1-203ENST00000461873 CRMP1Q14194 572 aa7.45□□□□□ -1.22
LDB1-203ENST00000461873 ZNF404Q494X3 552 aa7.45□□□□□ -1.22
LDB1-203ENST00000461873 KLHL12Q53G59 568 aa7.45□□□□□ -1.22
LDB1-203ENST00000461873 SPRNQ5BIV9 151 aa7.45□□□□□ -1.22
LDB1-203ENST00000461873 TMEM255AQ5JRV8 349 aa7.45□□□□□ -1.22
LDB1-203ENST00000461873 GPR157Q5UAW9 335 aa7.45□□□□□ -1.22
LDB1-203ENST00000461873 PLPP7Q8NBV4 271 aa7.45□□□□□ -1.22
LDB1-203ENST00000461873 OR52H1Q8NGJ2 320 aa7.45□□□□□ -1.22
LDB1-203ENST00000461873 CANT1Q8WVQ1 401 aa7.45□□□□□ -1.22
LDB1-203ENST00000461873 RAB40AQ8WXH6 277 aa7.45□□□□□ -1.22
LDB1-203ENST00000461873 PGAM5Q96HS1 289 aa7.45□□□□□ -1.22
LDB1-203ENST00000461873 MAP6Q96JE9 813 aa7.45□□□□□ -1.22
LDB1-203ENST00000461873 HIST1H2AAQ96QV6 131 aa7.45□□□□□ -1.22
LDB1-203ENST00000461873 CHID1Q9BWS9 393 aa7.45□□□□□ -1.22
LDB1-203ENST00000461873 DGCR6LQ9BY27 220 aa7.45□□□□□ -1.22
LDB1-203ENST00000461873 PRRG3Q9BZD7 231 aa7.45□□□□□ -1.22
LDB1-203ENST00000461873 OR51V1Q9H2C8 321 aa7.45□□□□□ -1.22
LDB1-203ENST00000461873 TMEM165Q9HC07 324 aa7.45□□□□□ -1.22
LDB1-203ENST00000461873 BRD7Q9NPI1 651 aa7.45□□□□□ -1.22
LDB1-203ENST00000461873 MRPL22Q9NWU5 206 aaKnown RBP7.45□□□□□ -1.22
LDB1-203ENST00000461873 C1orf123Q9NWV4 160 aa7.45□□□□□ -1.22
LDB1-203ENST00000461873 DCAF16Q9NXF7 216 aa7.45□□□□□ -1.22
LDB1-203ENST00000461873 PDP1Q9P0J1 537 aaPredicted RBP7.45□□□□□ -1.22
LDB1-203ENST00000461873 INSIG2Q9Y5U4 225 aa7.45□□□□□ -1.22
LDB1-203ENST00000461873 COMMD3-BMI1R4GMX3 469 aa7.45□□□□□ -1.22
LDB1-203ENST00000461873 TCRBV3S1A0A5B6 114 aa7.44□□□□□ -1.22
LDB1-203ENST00000461873 DHRS12A0PJE2 317 aa7.44□□□□□ -1.22
LDB1-203ENST00000461873 A8MXK9 166 aa7.44□□□□□ -1.22
LDB1-203ENST00000461873 PHYHO14832 338 aa7.44□□□□□ -1.22
LDB1-203ENST00000461873 MLNRO43193 412 aa7.44□□□□□ -1.22
LDB1-203ENST00000461873 ENSAO43768 121 aaKnown RBP7.44□□□□□ -1.22
LDB1-203ENST00000461873 FAM20BO75063 409 aa7.44□□□□□ -1.22
LDB1-203ENST00000461873 TIPRLO75663 272 aa7.44□□□□□ -1.22
LDB1-203ENST00000461873 ATP6V1G2O95670 118 aa7.44□□□□□ -1.22
LDB1-203ENST00000461873 AVPP01185 164 aa7.44□□□□□ -1.22
LDB1-203ENST00000461873 LIPFP07098 398 aa7.44□□□□□ -1.22
LDB1-203ENST00000461873 SLC2A1P11166 492 aa7.44□□□□□ -1.22
LDB1-203ENST00000461873 NAA10P41227 235 aaPredicted RBP7.44□□□□□ -1.22
LDB1-203ENST00000461873 MAGEA2P43356 314 aa7.44□□□□□ -1.22
LDB1-203ENST00000461873 GATA4P43694 442 aa7.44□□□□□ -1.22
LDB1-203ENST00000461873 PRSS12P56730 875 aa7.44□□□□□ -1.22
LDB1-203ENST00000461873 ZNF92Q03936 586 aa7.44□□□□□ -1.22
LDB1-203ENST00000461873 RCN1Q15293 331 aa7.44□□□□□ -1.22
LDB1-203ENST00000461873 METTL11BQ5VVY1 283 aa7.44□□□□□ -1.22
LDB1-203ENST00000461873 PRAMEF6Q5VXH4 476 aa7.44□□□□□ -1.22
LDB1-203ENST00000461873 SFRP4Q6FHJ7 346 aaPredicted RBP7.44□□□□□ -1.22
LDB1-203ENST00000461873 COLCA1Q6ZS62 124 aa7.44□□□□□ -1.22
LDB1-203ENST00000461873 KCTD8Q6ZWB6 473 aa7.44□□□□□ -1.22
LDB1-203ENST00000461873 DPY19L4Q7Z388 723 aa7.44□□□□□ -1.22
LDB1-203ENST00000461873 AMIGO2Q86SJ2 522 aa7.44□□□□□ -1.22
LDB1-203ENST00000461873 NAA40Q86UY6 237 aa7.44□□□□□ -1.22
LDB1-203ENST00000461873 COMMD2Q86X83 199 aa7.44□□□□□ -1.22
LDB1-203ENST00000461873 PARP8Q8N3A8 854 aa7.44□□□□□ -1.22
LDB1-203ENST00000461873 PNLDC1Q8NA58 520 aaKnown RBP7.44□□□□□ -1.22
LDB1-203ENST00000461873 ZNF511Q8NB15 262 aa7.44□□□□□ -1.22
LDB1-203ENST00000461873 CSNK2A3Q8NEV1 391 aa7.44□□□□□ -1.22
LDB1-203ENST00000461873 SEMA6DQ8NFY4 1073 aa7.44□□□□□ -1.22
LDB1-203ENST00000461873 OR2AE1Q8NHA4 323 aa7.44□□□□□ -1.22
LDB1-203ENST00000461873 FAM81AQ8TBF8 368 aa7.44□□□□□ -1.22
LDB1-203ENST00000461873 THEM6Q8WUY1 208 aa7.44□□□□□ -1.22
LDB1-203ENST00000461873 STMN2Q93045 179 aa7.44□□□□□ -1.22
LDB1-203ENST00000461873 SIGLEC11Q96RL6 698 aa7.44□□□□□ -1.22
LDB1-203ENST00000461873 FEVQ99581 238 aa7.44□□□□□ -1.22
LDB1-203ENST00000461873 MICU1Q9BPX6 476 aa7.44□□□□□ -1.22
LDB1-203ENST00000461873 NUDT16L1Q9BRJ7 211 aaKnown RBP7.44□□□□□ -1.22
LDB1-203ENST00000461873 TMEM246Q9BRR3 403 aa7.44□□□□□ -1.22
LDB1-203ENST00000461873 PLA2G12AQ9BZM1 189 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms