RNA–Protein interactions for RNA: ENST00000461558.2

CFHR3-204, Transcript of complement factor H related 3, humanhuman

TSL 2

Gene CFHR3, Length 785 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-204ENST00000461558 RNH1P13489 461 aaKnown RBP3.38□□□□□ -1.87
CFHR3-204ENST00000461558 MMP9P14780 707 aa3.38□□□□□ -1.87
CFHR3-204ENST00000461558 HIST1H1CP16403 213 aaKnown RBP3.38□□□□□ -1.87
CFHR3-204ENST00000461558 NPR2P20594 1047 aa3.38□□□□□ -1.87
CFHR3-204ENST00000461558 F8A1P23610 371 aa3.38□□□□□ -1.87
CFHR3-204ENST00000461558 MYL9P24844 172 aa3.38□□□□□ -1.87
CFHR3-204ENST00000461558 BTCP35070 178 aa3.38□□□□□ -1.87
CFHR3-204ENST00000461558 NUDT1P36639 197 aa3.38□□□□□ -1.87
CFHR3-204ENST00000461558 CAPZA2P47755 286 aa3.38□□□□□ -1.87
CFHR3-204ENST00000461558 HCCSP53701 268 aa3.38□□□□□ -1.87
CFHR3-204ENST00000461558 PSMD4P55036 377 aaKnown RBP3.38□□□□□ -1.87
CFHR3-204ENST00000461558 MAZP56270 477 aaKnown RBP3.38□□□□□ -1.87
CFHR3-204ENST00000461558 OR10A3P58181 314 aa3.38□□□□□ -1.87
CFHR3-204ENST00000461558 OR12D2P58182 307 aa3.38□□□□□ -1.87
CFHR3-204ENST00000461558 TAS2R43P59537 309 aa3.38□□□□□ -1.87
CFHR3-204ENST00000461558 RPS11P62280 158 aaKnown RBP eCLIP3.38□□□□□ -1.87
CFHR3-204ENST00000461558 ACTC1P68032 377 aa3.38□□□□□ -1.87
CFHR3-204ENST00000461558 ACTA1P68133 377 aa3.38□□□□□ -1.87
CFHR3-204ENST00000461558 FUT7Q11130 342 aa3.38□□□□□ -1.87
CFHR3-204ENST00000461558 MADCAM1Q13477 382 aa3.38□□□□□ -1.87
CFHR3-204ENST00000461558 C1orf61Q13536 156 aa3.38□□□□□ -1.87
CFHR3-204ENST00000461558 SF3A2Q15428 464 aaKnown RBP3.38□□□□□ -1.87
CFHR3-204ENST00000461558 ADIPOQQ15848 244 aa3.38□□□□□ -1.87
CFHR3-204ENST00000461558 NTRK2Q16620 822 aa3.38□□□□□ -1.87
CFHR3-204ENST00000461558 ISXQ2M1V0 245 aa3.38□□□□□ -1.87
CFHR3-204ENST00000461558 NDUFAF6Q330K2 333 aa3.38□□□□□ -1.87
CFHR3-204ENST00000461558 PCGF3Q3KNV8 242 aa3.38□□□□□ -1.87
CFHR3-204ENST00000461558 KLHL12Q53G59 568 aa3.38□□□□□ -1.87
CFHR3-204ENST00000461558 KLHL26Q53HC5 615 aa3.38□□□□□ -1.87
CFHR3-204ENST00000461558 ZNF684Q5T5D7 378 aa3.38□□□□□ -1.87
CFHR3-204ENST00000461558 FAM27D1Q5T7N8 215 aa3.38□□□□□ -1.87
CFHR3-204ENST00000461558 NSUN5P2Q63ZY6 315 aa3.38□□□□□ -1.87
CFHR3-204ENST00000461558 GPR139Q6DWJ6 353 aa3.38□□□□□ -1.87
CFHR3-204ENST00000461558 ULK3Q6PHR2 472 aa3.38□□□□□ -1.87
CFHR3-204ENST00000461558 RTL4Q6ZR62 310 aa3.38□□□□□ -1.87
CFHR3-204ENST00000461558 Q6ZS52 159 aa3.38□□□□□ -1.87
CFHR3-204ENST00000461558 SLC16A9Q7RTY1 509 aa3.38□□□□□ -1.87
CFHR3-204ENST00000461558 ZNF550Q7Z398 422 aa3.38□□□□□ -1.87
CFHR3-204ENST00000461558 TAF8Q7Z7C8 310 aa3.38□□□□□ -1.87
CFHR3-204ENST00000461558 OAFQ86UD1 273 aa3.38□□□□□ -1.87
CFHR3-204ENST00000461558 TPRA1Q86W33 373 aa3.38□□□□□ -1.87
CFHR3-204ENST00000461558 LRRC28Q86X40 367 aaPredicted RBP3.38□□□□□ -1.87
CFHR3-204ENST00000461558 C17orf82Q86X59 251 aaPredicted RBP3.38□□□□□ -1.87
CFHR3-204ENST00000461558 GPALPP1Q8IXQ4 340 aa3.38□□□□□ -1.87
CFHR3-204ENST00000461558 ZNF595Q8IYB9 648 aa3.38□□□□□ -1.87
CFHR3-204ENST00000461558 SYS1Q8N2H4 156 aa3.38□□□□□ -1.87
CFHR3-204ENST00000461558 Q8N377 158 aa3.38□□□□□ -1.87
CFHR3-204ENST00000461558 Q8N402 240 aa3.38□□□□□ -1.87
CFHR3-204ENST00000461558 ARL14Q8N4G2 192 aa3.38□□□□□ -1.87
CFHR3-204ENST00000461558 LRRC17Q8N6Y2 441 aa3.38□□□□□ -1.87
CFHR3-204ENST00000461558 BCORP1Q8N888 145 aa3.38□□□□□ -1.87
CFHR3-204ENST00000461558 LRRC75AQ8NAA5 344 aa3.38□□□□□ -1.87
CFHR3-204ENST00000461558 POMGNT2Q8NAT1 580 aa3.38□□□□□ -1.87
CFHR3-204ENST00000461558 AVL9Q8NBF6 648 aa3.38□□□□□ -1.87
CFHR3-204ENST00000461558 CYB561A3Q8NBI2 242 aa3.38□□□□□ -1.87
CFHR3-204ENST00000461558 NPEPL1Q8NDH3 523 aa3.38□□□□□ -1.87
CFHR3-204ENST00000461558 OR10H4Q8NGA5 316 aa3.38□□□□□ -1.87
CFHR3-204ENST00000461558 OR4M2Q8NGB6 313 aa3.38□□□□□ -1.87
CFHR3-204ENST00000461558 OR4M1Q8NGD0 313 aa3.38□□□□□ -1.87
CFHR3-204ENST00000461558 OR6C4Q8NGE1 309 aa3.38□□□□□ -1.87
CFHR3-204ENST00000461558 OR5J2Q8NH18 312 aa3.38□□□□□ -1.87
CFHR3-204ENST00000461558 OR4C3Q8NH37 302 aa3.38□□□□□ -1.87
CFHR3-204ENST00000461558 OR51A7Q8NH64 312 aa3.38□□□□□ -1.87
CFHR3-204ENST00000461558 OR4C6Q8NH72 309 aa3.38□□□□□ -1.87
CFHR3-204ENST00000461558 HAVCR2Q8TDQ0 301 aa3.38□□□□□ -1.87
CFHR3-204ENST00000461558 SMAP2Q8WU79 429 aaPredicted RBP3.38□□□□□ -1.87
CFHR3-204ENST00000461558 LIPHQ8WWY8 451 aa3.38□□□□□ -1.87
CFHR3-204ENST00000461558 RIT1Q92963 219 aa3.38□□□□□ -1.87
CFHR3-204ENST00000461558 SGTBQ96EQ0 304 aa3.38□□□□□ -1.87
CFHR3-204ENST00000461558 C4orf36Q96KX1 117 aa3.38□□□□□ -1.87
CFHR3-204ENST00000461558 ZNF578Q96N58 590 aaPredicted RBP3.38□□□□□ -1.87
CFHR3-204ENST00000461558 NECTIN4Q96NY8 510 aa3.38□□□□□ -1.87
CFHR3-204ENST00000461558 GPX7Q96SL4 187 aaPredicted RBP3.38□□□□□ -1.87
CFHR3-204ENST00000461558 TBX5Q99593 518 aa3.38□□□□□ -1.87
CFHR3-204ENST00000461558 CCDC3Q9BQI4 270 aa3.38□□□□□ -1.87
CFHR3-204ENST00000461558 MARVELD1Q9BSK0 173 aa3.38□□□□□ -1.87
CFHR3-204ENST00000461558 CHRNA10Q9GZZ6 450 aa3.38□□□□□ -1.87
CFHR3-204ENST00000461558 OR51V1Q9H2C8 321 aa3.38□□□□□ -1.87
CFHR3-204ENST00000461558 HRH4Q9H3N8 390 aa3.38□□□□□ -1.87
CFHR3-204ENST00000461558 UCK1Q9HA47 277 aa3.38□□□□□ -1.87
CFHR3-204ENST00000461558 TMEM165Q9HC07 324 aa3.38□□□□□ -1.87
CFHR3-204ENST00000461558 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.38□□□□□ -1.87
CFHR3-204ENST00000461558 PRTFDC1Q9NRG1 225 aa3.38□□□□□ -1.87
CFHR3-204ENST00000461558 RBFOX1Q9NWB1 397 aaKnown RBP3.38□□□□□ -1.87
CFHR3-204ENST00000461558 NUFIP1Q9UHK0 495 aaKnown RBP3.38□□□□□ -1.87
CFHR3-204ENST00000461558 KLHL21Q9UJP4 597 aa3.38□□□□□ -1.87
CFHR3-204ENST00000461558 TMEM184BQ9Y519 407 aaPredicted RBP3.38□□□□□ -1.87
CFHR3-204ENST00000461558 ALG5Q9Y673 324 aa3.38□□□□□ -1.87
CFHR3-204ENST00000461558 LOC102723996A0A087X1L8 192 aa3.37□□□□□ -1.87
CFHR3-204ENST00000461558 IGKV3D-11A0A0A0MRZ8 115 aa3.37□□□□□ -1.87
CFHR3-204ENST00000461558 IGHV1OR15-9A0A0B4J2B8 117 aa3.37□□□□□ -1.87
CFHR3-204ENST00000461558 A0A1B0GTQ1 180 aa3.37□□□□□ -1.87
CFHR3-204ENST00000461558 LRRN3E7EW58 273 aa3.37□□□□□ -1.87
CFHR3-204ENST00000461558 J3QLW9 94 aa3.37□□□□□ -1.87
CFHR3-204ENST00000461558 TFECO14948 347 aaPredicted RBP3.37□□□□□ -1.87
CFHR3-204ENST00000461558 MAGEB4O15481 346 aaPredicted RBP3.37□□□□□ -1.87
CFHR3-204ENST00000461558 ZNF749O43361 778 aa3.37□□□□□ -1.87
CFHR3-204ENST00000461558 IDH3BO43837 385 aa3.37□□□□□ -1.87
CFHR3-204ENST00000461558 TRIM3O75382 744 aaPredicted RBP3.37□□□□□ -1.87
CFHR3-204ENST00000461558 PAHP00439 452 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms